RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ZNF445P59923 1031 aa13.65□□□□□ -0.22
HPS1-208ENST00000467246 TOB2Q14106 344 aaPredicted RBP13.65□□□□□ -0.22
HPS1-208ENST00000467246 CYP21A2P08686 494 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 TTLL11Q8NHH1 800 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 GREM2Q9H772 168 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
HPS1-208ENST00000467246 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.64□□□□□ -0.23
HPS1-208ENST00000467246 COL22A1Q8NFW1 1626 aaPredicted RBP13.64□□□□□ -0.23
HPS1-208ENST00000467246 GADD45BO75293 160 aaPredicted RBP13.64□□□□□ -0.23
HPS1-208ENST00000467246 FKBP4Q02790 459 aaKnown RBP eCLIP13.64□□□□□ -0.23
HPS1-208ENST00000467246 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
HPS1-208ENST00000467246 USP48Q86UV5 1035 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
HPS1-208ENST00000467246 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
HPS1-208ENST00000467246 ITGA6P23229 1130 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 DDB1Q16531 1140 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 NEK1Q96PY6 1258 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
HPS1-208ENST00000467246 LRP6O75581 1613 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
HPS1-208ENST00000467246 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
HPS1-208ENST00000467246 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
HPS1-208ENST00000467246 F13A1P00488 732 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 SCARF1Q14162 830 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 NUTM2AQ8IVF1 878 aaPredicted RBP13.62□□□□□ -0.23
HPS1-208ENST00000467246 ALDH8A1Q9H2A2 487 aaPredicted RBP13.62□□□□□ -0.23
HPS1-208ENST00000467246 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 MTMR6Q9Y217 621 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 MBD3O95983 291 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
HPS1-208ENST00000467246 CTSWP56202 376 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 STK3Q13188 491 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 KRT32Q14532 448 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 LDHAL6AQ6ZMR3 332 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 RIPOR2Q9Y4F9 1068 aa13.62□□□□□ -0.23
HPS1-208ENST00000467246 A0A0G2JLW4 131 aa13.61□□□□□ -0.23
HPS1-208ENST00000467246 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
HPS1-208ENST00000467246 STOX1Q6ZVD7 989 aa13.61□□□□□ -0.23
HPS1-208ENST00000467246 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
HPS1-208ENST00000467246 SYCE3A1L190 88 aa13.61□□□□□ -0.23
HPS1-208ENST00000467246 PI16Q6UXB8 463 aa13.61□□□□□ -0.23
HPS1-208ENST00000467246 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
HPS1-208ENST00000467246 MAST3O60307 1309 aa13.61□□□□□ -0.23
HPS1-208ENST00000467246 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.6□□□□□ -0.23
HPS1-208ENST00000467246 TCHHQ07283 1943 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
HPS1-208ENST00000467246 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 M0R2C6 588 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
HPS1-208ENST00000467246 NASPP49321 788 aaPredicted RBP13.6□□□□□ -0.23
HPS1-208ENST00000467246 OSBP2Q969R2 916 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 CDCA7Q9BWT1 371 aaPredicted RBP13.6□□□□□ -0.23
HPS1-208ENST00000467246 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 ZAP70P43403 619 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
HPS1-208ENST00000467246 Q6ZUG5 572 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 DSCC1Q9BVC3 393 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 CNNM1Q9NRU3 951 aa13.6□□□□□ -0.23
HPS1-208ENST00000467246 RIC1Q4ADV7 1423 aa13.59□□□□□ -0.23
HPS1-208ENST00000467246 ATP6V1AP38606 617 aa13.59□□□□□ -0.23
HPS1-208ENST00000467246 EIF5P55010 431 aaKnown RBP13.59□□□□□ -0.23
HPS1-208ENST00000467246 ATP2B3Q16720 1220 aa13.59□□□□□ -0.23
HPS1-208ENST00000467246 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
HPS1-208ENST00000467246 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
HPS1-208ENST00000467246 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
HPS1-208ENST00000467246 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
HPS1-208ENST00000467246 TMEM87AQ8NBN3 555 aa13.59□□□□□ -0.23
HPS1-208ENST00000467246 LTBP4Q8N2S1 1624 aa13.58□□□□□ -0.23
HPS1-208ENST00000467246 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 PDE8AO60658 829 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 CRKLP46109 303 aaKnown RBP13.58□□□□□ -0.24
HPS1-208ENST00000467246 PIP4K2BP78356 416 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 DNM1Q05193 864 aaKnown RBP13.58□□□□□ -0.24
HPS1-208ENST00000467246 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 CCDC87Q9NVE4 849 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 FIBPO43427 364 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 ITPK1Q13572 414 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 ATP6V1DQ9Y5K8 247 aa13.58□□□□□ -0.24
HPS1-208ENST00000467246 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 SPATA31A5Q5VU36 1347 aa13.57□□□□□ -0.24
HPS1-208ENST00000467246 SPATA31A7Q8IWB4 1347 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms