RNA–Protein interactions for RNA: ENST00000467216.2

COL21A1-207, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-207ENST00000467216 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
COL21A1-207ENST00000467216 GGA3Q9NZ52 723 aa17.39■□□□□ 0.37
COL21A1-207ENST00000467216 FAM155AB1AL88 458 aaPredicted RBP17.38■□□□□ 0.37
COL21A1-207ENST00000467216 CHL1O00533 1208 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 UFL1O94874 794 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 EGFRP00533 1210 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 HOXB7P09629 217 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
COL21A1-207ENST00000467216 TBC1D16Q8TBP0 767 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 RNF186Q9NXI6 227 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 PCDH10Q9P2E7 1040 aa17.38■□□□□ 0.37
COL21A1-207ENST00000467216 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
COL21A1-207ENST00000467216 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
COL21A1-207ENST00000467216 RALBP1Q15311 655 aa17.37■□□□□ 0.37
COL21A1-207ENST00000467216 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
COL21A1-207ENST00000467216 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
COL21A1-207ENST00000467216 GGA1Q9UJY5 639 aa17.37■□□□□ 0.37
COL21A1-207ENST00000467216 SLC10A3P09131 477 aa17.36■□□□□ 0.37
COL21A1-207ENST00000467216 SOX10P56693 466 aa17.36■□□□□ 0.37
COL21A1-207ENST00000467216 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL21A1-207ENST00000467216 CDCA5Q96FF9 252 aa17.36■□□□□ 0.37
COL21A1-207ENST00000467216 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
COL21A1-207ENST00000467216 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
COL21A1-207ENST00000467216 VIL1P09327 827 aaKnown RBP17.35■□□□□ 0.37
COL21A1-207ENST00000467216 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
COL21A1-207ENST00000467216 CTU1Q7Z7A3 348 aaKnown RBP17.35■□□□□ 0.37
COL21A1-207ENST00000467216 LRRC37AA6NMS7 1700 aa17.34■□□□□ 0.37
COL21A1-207ENST00000467216 SCARF1Q14162 830 aa17.34■□□□□ 0.37
COL21A1-207ENST00000467216 ANGEL2Q5VTE6 544 aaKnown RBP17.34■□□□□ 0.37
COL21A1-207ENST00000467216 ZBTB38Q8NAP3 1195 aaPredicted RBP17.34■□□□□ 0.37
COL21A1-207ENST00000467216 AGBL3Q8NEM8 1001 aa17.34■□□□□ 0.37
COL21A1-207ENST00000467216 FKBP1BP68106 108 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.36
COL21A1-207ENST00000467216 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 RSBN1LQ6PCB5 846 aaPredicted RBP17.33■□□□□ 0.36
COL21A1-207ENST00000467216 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 CSRNP1Q96S65 589 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 HDAC9Q9UKV0 1011 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 TAF1P21675 1872 aa17.33■□□□□ 0.36
COL21A1-207ENST00000467216 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
COL21A1-207ENST00000467216 TTLL12Q14166 644 aaPredicted RBP17.32■□□□□ 0.36
COL21A1-207ENST00000467216 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
COL21A1-207ENST00000467216 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
COL21A1-207ENST00000467216 ANKRD18AQ8IVF6 992 aa17.31■□□□□ 0.36
COL21A1-207ENST00000467216 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
COL21A1-207ENST00000467216 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
COL21A1-207ENST00000467216 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
COL21A1-207ENST00000467216 NF2P35240 595 aa17.3■□□□□ 0.36
COL21A1-207ENST00000467216 MYD88Q99836 296 aa17.3■□□□□ 0.36
COL21A1-207ENST00000467216 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
COL21A1-207ENST00000467216 XDHP47989 1333 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 USP17L3A6NCW0 530 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 USP17L4A6NCW7 530 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 PDE8AO60658 829 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
COL21A1-207ENST00000467216 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 PKN2Q16513 984 aaKnown RBP17.29■□□□□ 0.36
COL21A1-207ENST00000467216 USP17L1Q7RTZ2 530 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 OGFOD1Q8N543 542 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
COL21A1-207ENST00000467216 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
COL21A1-207ENST00000467216 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
COL21A1-207ENST00000467216 PITPNM2Q9BZ72 1349 aa17.28■□□□□ 0.36
COL21A1-207ENST00000467216 PODNQ7Z5L7 613 aa17.28■□□□□ 0.36
COL21A1-207ENST00000467216 CCDC191Q8NCU4 936 aa17.28■□□□□ 0.36
COL21A1-207ENST00000467216 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
COL21A1-207ENST00000467216 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
COL21A1-207ENST00000467216 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
COL21A1-207ENST00000467216 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.36
COL21A1-207ENST00000467216 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
COL21A1-207ENST00000467216 PCCAP05165 728 aaPredicted RBP17.27■□□□□ 0.36
COL21A1-207ENST00000467216 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
COL21A1-207ENST00000467216 UBE2Q2LH0YL09 131 aa17.26■□□□□ 0.35
COL21A1-207ENST00000467216 PRPF38BQ5VTL8 546 aaKnown RBP17.26■□□□□ 0.35
COL21A1-207ENST00000467216 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
COL21A1-207ENST00000467216 HPS5Q9UPZ3 1129 aa17.26■□□□□ 0.35
COL21A1-207ENST00000467216 ZNF609O15014 1411 aa17.25■□□□□ 0.35
COL21A1-207ENST00000467216 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
COL21A1-207ENST00000467216 PAPPA2Q9BXP8 1791 aa17.25■□□□□ 0.35
COL21A1-207ENST00000467216 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
COL21A1-207ENST00000467216 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
COL21A1-207ENST00000467216 SREBF2Q12772 1141 aa17.24■□□□□ 0.35
COL21A1-207ENST00000467216 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
COL21A1-207ENST00000467216 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
COL21A1-207ENST00000467216 GNAI1P63096 354 aa17.23■□□□□ 0.35
COL21A1-207ENST00000467216 MOB2Q70IA6 237 aa17.23■□□□□ 0.35
COL21A1-207ENST00000467216 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
COL21A1-207ENST00000467216 ZNF296Q8WUU4 475 aaPredicted RBP17.23■□□□□ 0.35
COL21A1-207ENST00000467216 GMLQ99445 158 aa17.23■□□□□ 0.35
COL21A1-207ENST00000467216 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
COL21A1-207ENST00000467216 CTSWP56202 376 aa17.22■□□□□ 0.35
COL21A1-207ENST00000467216 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
COL21A1-207ENST00000467216 MKRN3Q13064 507 aaKnown RBP17.22■□□□□ 0.35
COL21A1-207ENST00000467216 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms