RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 FAM155AB1AL88 458 aaPredicted RBP25.05■■□□□ 1.6
FAM53A-204ENST00000467215 HOXB7P09629 217 aa25.05■■□□□ 1.6
FAM53A-204ENST00000467215 RPS12P25398 132 aaKnown RBP25.05■■□□□ 1.6
FAM53A-204ENST00000467215 RBM26Q5T8P6 1007 aaKnown RBP25.05■■□□□ 1.6
FAM53A-204ENST00000467215 GGA3Q9NZ52 723 aa25.05■■□□□ 1.6
FAM53A-204ENST00000467215 DBF4Q9UBU7 674 aaPredicted RBP25.05■■□□□ 1.6
FAM53A-204ENST00000467215 PAPPA2Q9BXP8 1791 aa25.04■■□□□ 1.6
FAM53A-204ENST00000467215 IRS4O14654 1257 aaPredicted RBP25.04■■□□□ 1.6
FAM53A-204ENST00000467215 KIF4BQ2VIQ3 1234 aa25.04■■□□□ 1.6
FAM53A-204ENST00000467215 RGMBQ6NW40 437 aa25.04■■□□□ 1.6
FAM53A-204ENST00000467215 TBC1D16Q8TBP0 767 aa25.04■■□□□ 1.6
FAM53A-204ENST00000467215 EYA3Q99504 573 aa25.04■■□□□ 1.6
FAM53A-204ENST00000467215 ASTN2O75129 1339 aaPredicted RBP25.04■■□□□ 1.6
FAM53A-204ENST00000467215 MYBBP1AQ9BQG0 1328 aaKnown RBP25.04■■□□□ 1.6
FAM53A-204ENST00000467215 ZNF609O15014 1411 aa25.03■■□□□ 1.6
FAM53A-204ENST00000467215 DCPSQ96C86 337 aaKnown RBP25.02■■□□□ 1.6
FAM53A-204ENST00000467215 C2orf69Q8N8R5 385 aa25.01■■□□□ 1.59
FAM53A-204ENST00000467215 RUNDC1Q96C34 613 aa25.01■■□□□ 1.59
FAM53A-204ENST00000467215 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
FAM53A-204ENST00000467215 PDE4DIPQ5VU43 2346 aa25.01■■□□□ 1.59
FAM53A-204ENST00000467215 UFL1O94874 794 aa25■■□□□ 1.59
FAM53A-204ENST00000467215 DUSP27Q5VZP5 1158 aa25■■□□□ 1.59
FAM53A-204ENST00000467215 HYPKQ9NX55 129 aa25■■□□□ 1.59
FAM53A-204ENST00000467215 RPS8P62241 208 aaKnown RBP24.99■■□□□ 1.59
FAM53A-204ENST00000467215 KIF23Q02241 960 aaPredicted RBP24.99■■□□□ 1.59
FAM53A-204ENST00000467215 TNRC18O15417 2968 aaPredicted RBP24.98■■□□□ 1.59
FAM53A-204ENST00000467215 ZNF157P51786 506 aaPredicted RBP24.98■■□□□ 1.59
FAM53A-204ENST00000467215 WDR43Q15061 677 aaKnown RBP eCLIP24.98■■□□□ 1.59
FAM53A-204ENST00000467215 MBIPQ9NS73 344 aa24.98■■□□□ 1.59
FAM53A-204ENST00000467215 PODXL2Q9NZ53 605 aa24.98■■□□□ 1.59
FAM53A-204ENST00000467215 SLC10A3P09131 477 aa24.97■■□□□ 1.59
FAM53A-204ENST00000467215 VIL1P09327 827 aaKnown RBP24.97■■□□□ 1.59
FAM53A-204ENST00000467215 GOLGA2Q08379 1002 aa24.97■■□□□ 1.59
FAM53A-204ENST00000467215 TRIM28Q13263 835 aaKnown RBP24.97■■□□□ 1.59
FAM53A-204ENST00000467215 SULF1Q8IWU6 871 aa24.97■■□□□ 1.59
FAM53A-204ENST00000467215 ZBTB38Q8NAP3 1195 aaPredicted RBP24.97■■□□□ 1.59
FAM53A-204ENST00000467215 CDCA5Q96FF9 252 aa24.97■■□□□ 1.59
FAM53A-204ENST00000467215 ZC3H12CQ9C0D7 883 aaKnown RBP24.97■■□□□ 1.59
FAM53A-204ENST00000467215 SAGE1Q9NXZ1 904 aa24.97■■□□□ 1.59
FAM53A-204ENST00000467215 PHAXQ9H814 394 aaKnown RBP24.96■■□□□ 1.59
FAM53A-204ENST00000467215 RIC3Q7Z5B4 369 aa24.95■■□□□ 1.58
FAM53A-204ENST00000467215 CCDC102AQ96A19 550 aa24.95■■□□□ 1.58
FAM53A-204ENST00000467215 CCDC85AQ96PX6 553 aaPredicted RBP24.95■■□□□ 1.58
FAM53A-204ENST00000467215 MYD88Q99836 296 aa24.95■■□□□ 1.58
FAM53A-204ENST00000467215 ANKIB1Q9P2G1 1089 aa24.95■■□□□ 1.58
FAM53A-204ENST00000467215 GGA1Q9UJY5 639 aa24.95■■□□□ 1.58
FAM53A-204ENST00000467215 TRPA1O75762 1119 aa24.94■■□□□ 1.58
FAM53A-204ENST00000467215 ANGEL2Q5VTE6 544 aaKnown RBP24.94■■□□□ 1.58
FAM53A-204ENST00000467215 G3V3G9 751 aa24.93■■□□□ 1.58
FAM53A-204ENST00000467215 DCAF8Q5TAQ9 597 aa24.93■■□□□ 1.58
FAM53A-204ENST00000467215 RSBN1LQ6PCB5 846 aaPredicted RBP24.93■■□□□ 1.58
FAM53A-204ENST00000467215 RASAL3Q86YV0 1011 aa24.93■■□□□ 1.58
FAM53A-204ENST00000467215 JARID2Q92833 1246 aaPredicted RBP24.93■■□□□ 1.58
FAM53A-204ENST00000467215 RNF186Q9NXI6 227 aa24.93■■□□□ 1.58
FAM53A-204ENST00000467215 ADAMTS8Q9UP79 889 aa24.93■■□□□ 1.58
FAM53A-204ENST00000467215 ZNF280AP59817 542 aaPredicted RBP24.92■■□□□ 1.58
FAM53A-204ENST00000467215 PCCAP05165 728 aaPredicted RBP24.91■■□□□ 1.58
FAM53A-204ENST00000467215 SOX10P56693 466 aa24.91■■□□□ 1.58
FAM53A-204ENST00000467215 CCDC152Q4G0S7 254 aa24.91■■□□□ 1.58
FAM53A-204ENST00000467215 A0A1B0GUL6 1792 aa24.9■■□□□ 1.58
FAM53A-204ENST00000467215 XDHP47989 1333 aa24.9■■□□□ 1.58
FAM53A-204ENST00000467215 AGBL3Q8NEM8 1001 aa24.9■■□□□ 1.58
FAM53A-204ENST00000467215 CSRNP1Q96S65 589 aa24.9■■□□□ 1.58
FAM53A-204ENST00000467215 ELL2O00472 640 aaPredicted RBP24.89■■□□□ 1.58
FAM53A-204ENST00000467215 PDE8AO60658 829 aa24.89■■□□□ 1.58
FAM53A-204ENST00000467215 ZNF853P0CG23 659 aa24.89■■□□□ 1.58
FAM53A-204ENST00000467215 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.58
FAM53A-204ENST00000467215 SCARF1Q14162 830 aa24.89■■□□□ 1.58
FAM53A-204ENST00000467215 CCDC191Q8NCU4 936 aa24.89■■□□□ 1.58
FAM53A-204ENST00000467215 SCAF8Q9UPN6 1271 aaKnown RBP24.89■■□□□ 1.58
FAM53A-204ENST00000467215 GMLQ99445 158 aa24.88■■□□□ 1.57
FAM53A-204ENST00000467215 CWC25Q9NXE8 425 aaPredicted RBP24.88■■□□□ 1.57
FAM53A-204ENST00000467215 HSP90B1P14625 803 aaKnown RBP24.87■■□□□ 1.57
FAM53A-204ENST00000467215 ANKRD18AQ8IVF6 992 aa24.87■■□□□ 1.57
FAM53A-204ENST00000467215 MYOZ2Q9NPC6 264 aa24.87■■□□□ 1.57
FAM53A-204ENST00000467215 PITPNM2Q9BZ72 1349 aa24.86■■□□□ 1.57
FAM53A-204ENST00000467215 ECM29Q5VYK3 1845 aa24.86■■□□□ 1.57
FAM53A-204ENST00000467215 MED23Q9ULK4 1368 aa24.86■■□□□ 1.57
FAM53A-204ENST00000467215 MOB2Q70IA6 237 aa24.86■■□□□ 1.57
FAM53A-204ENST00000467215 IFT57Q9NWB7 429 aa24.86■■□□□ 1.57
FAM53A-204ENST00000467215 USP17L8P0C7I0 530 aa24.85■■□□□ 1.57
FAM53A-204ENST00000467215 WTIPA6NIX2 430 aaPredicted RBP24.84■■□□□ 1.57
FAM53A-204ENST00000467215 CTSWP56202 376 aa24.84■■□□□ 1.57
FAM53A-204ENST00000467215 METTL22Q9BUU2 404 aaPredicted RBP24.84■■□□□ 1.57
FAM53A-204ENST00000467215 LAMB1P07942 1786 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 USP17L3A6NCW0 530 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 USP17L4A6NCW7 530 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 ATP2B4P23634 1241 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 GNAI1P63096 354 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 FKBP1BP68106 108 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 USP17L1Q7RTZ2 530 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 CTU1Q7Z7A3 348 aaKnown RBP24.83■■□□□ 1.57
FAM53A-204ENST00000467215 C8orf58Q8NAV2 365 aa24.83■■□□□ 1.57
FAM53A-204ENST00000467215 APAF1O14727 1248 aa24.82■■□□□ 1.56
FAM53A-204ENST00000467215 MXD3Q9BW11 206 aa24.82■■□□□ 1.56
FAM53A-204ENST00000467215 NBPF9Q3BBW0 867 aa24.81■■□□□ 1.56
FAM53A-204ENST00000467215 PRAMEF18Q5VWM3 479 aa24.81■■□□□ 1.56
FAM53A-204ENST00000467215 PODNQ7Z5L7 613 aa24.81■■□□□ 1.56
FAM53A-204ENST00000467215 CDC5LQ99459 802 aaKnown RBP24.81■■□□□ 1.56
FAM53A-204ENST00000467215 MAP3K2Q9Y2U5 619 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms