RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 FBXO38Q6PIJ6 1188 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 FBXL16Q8N461 479 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 GRM8O00222 908 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
CHD1L-205ENST00000467213 CALCOCO1Q9P1Z2 691 aa18.21■□□□□ 0.51
CHD1L-205ENST00000467213 USP27XA6NNY8 438 aa18.2■□□□□ 0.5
CHD1L-205ENST00000467213 KINO60870 393 aaKnown RBP18.2■□□□□ 0.5
CHD1L-205ENST00000467213 NLRP6P59044 892 aa18.2■□□□□ 0.5
CHD1L-205ENST00000467213 SRRTQ9BXP5 876 aaKnown RBP18.2■□□□□ 0.5
CHD1L-205ENST00000467213 MAP3K2Q9Y2U5 619 aa18.2■□□□□ 0.5
CHD1L-205ENST00000467213 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
CHD1L-205ENST00000467213 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
CHD1L-205ENST00000467213 NAA30Q147X3 362 aaPredicted RBP18.19■□□□□ 0.5
CHD1L-205ENST00000467213 NRDCO43847 1150 aa18.19■□□□□ 0.5
CHD1L-205ENST00000467213 IP6K1Q92551 441 aa18.19■□□□□ 0.5
CHD1L-205ENST00000467213 KAZALD1Q96I82 304 aa18.19■□□□□ 0.5
CHD1L-205ENST00000467213 SOX12O15370 315 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
CHD1L-205ENST00000467213 NBPF11Q86T75 865 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 PHLPP2Q6ZVD8 1323 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 MYO1BO43795 1136 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 JAK2O60674 1132 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 TPM1P09493 284 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
CHD1L-205ENST00000467213 NSUN7Q8NE18 718 aaKnown RBP18.18■□□□□ 0.5
CHD1L-205ENST00000467213 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
CHD1L-205ENST00000467213 SPEF2Q9C093 1822 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 ADALQ6DHV7 355 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 Q6ZUG5 572 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
CHD1L-205ENST00000467213 TIGD1Q96MW7 591 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 SH3TC1Q8TE82 1336 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 COL9A3Q14050 684 aaPredicted RBP18.17■□□□□ 0.5
CHD1L-205ENST00000467213 ELF2Q15723 593 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 FMR1NBQ8N0W7 255 aaPredicted RBP18.17■□□□□ 0.5
CHD1L-205ENST00000467213 ZNF592Q92610 1267 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 GOLPH3LQ9H4A5 285 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
CHD1L-205ENST00000467213 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
CHD1L-205ENST00000467213 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 SCRN1Q12765 414 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 FILIP1Q7Z7B0 1213 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 FCHSD1Q86WN1 690 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 SUCLG2Q96I99 432 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 RTEL1Q9NZ71 1219 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 E4F1Q66K89 784 aaPredicted RBP18.16■□□□□ 0.5
CHD1L-205ENST00000467213 TSPYL1Q9H0U9 437 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 ZNF446Q9NWS9 450 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 USP16Q9Y5T5 823 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
CHD1L-205ENST00000467213 SLIT3O75094 1523 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 CYP2C19P33261 490 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 TEFQ10587 303 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 DHX32Q7L7V1 743 aaKnown RBP18.15■□□□□ 0.5
CHD1L-205ENST00000467213 ZNF274Q96GC6 653 aaPredicted RBP18.15■□□□□ 0.5
CHD1L-205ENST00000467213 EVCP57679 992 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 TPM4P67936 248 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 ARID5BQ14865 1188 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 DDX54Q8TDD1 881 aaKnown RBP18.15■□□□□ 0.5
CHD1L-205ENST00000467213 MRPS27Q92552 414 aaKnown RBP18.15■□□□□ 0.5
CHD1L-205ENST00000467213 PPP1R13BQ96KQ4 1090 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
CHD1L-205ENST00000467213 TMEM94Q12767 1356 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
CHD1L-205ENST00000467213 TULP2O00295 520 aa18.14■□□□□ 0.5
CHD1L-205ENST00000467213 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.5
CHD1L-205ENST00000467213 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.5
CHD1L-205ENST00000467213 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.5
CHD1L-205ENST00000467213 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.5
CHD1L-205ENST00000467213 IKBKBO14920 756 aa18.14■□□□□ 0.49
CHD1L-205ENST00000467213 ZRANB2O95218 330 aaKnown RBP eCLIP18.14■□□□□ 0.49
CHD1L-205ENST00000467213 LTKP29376 864 aa18.14■□□□□ 0.49
CHD1L-205ENST00000467213 EXOSC10Q01780 885 aaKnown RBP18.14■□□□□ 0.49
CHD1L-205ENST00000467213 PLEKHO1Q53GL0 409 aaPredicted RBP18.14■□□□□ 0.49
CHD1L-205ENST00000467213 LGR6Q9HBX8 967 aa18.14■□□□□ 0.49
CHD1L-205ENST00000467213 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.14■□□□□ 0.497e-9■■□□□ 13.6
CHD1L-205ENST00000467213 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
CHD1L-205ENST00000467213 YEATS4O95619 227 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 STK3Q13188 491 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 USP28Q96RU2 1077 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 CCDC8Q9H0W5 538 aaPredicted RBP18.13■□□□□ 0.49
CHD1L-205ENST00000467213 ARGLU1Q9NWB6 273 aaPredicted RBP18.13■□□□□ 0.49
CHD1L-205ENST00000467213 DDX60Q8IY21 1712 aaKnown RBP18.13■□□□□ 0.49
CHD1L-205ENST00000467213 ZNF609O15014 1411 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 KIAA1468Q9P260 1216 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 CYP21A2P08686 494 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 AOPEPQ8N6M6 819 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 TMEM51Q9NW97 253 aa18.13■□□□□ 0.49
CHD1L-205ENST00000467213 TLR7Q9NYK1 1049 aaKnown RBP18.13■□□□□ 0.49
CHD1L-205ENST00000467213 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
CHD1L-205ENST00000467213 FSIP1Q8NA03 581 aa18.12■□□□□ 0.49
CHD1L-205ENST00000467213 KCNG4Q8TDN1 519 aa18.12■□□□□ 0.49
CHD1L-205ENST00000467213 HAUS7Q99871 368 aa18.12■□□□□ 0.49
CHD1L-205ENST00000467213 NOL10Q9BSC4 688 aaKnown RBP18.12■□□□□ 0.49
CHD1L-205ENST00000467213 UBXN6Q9BZV1 441 aa18.12■□□□□ 0.49
CHD1L-205ENST00000467213 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
CHD1L-205ENST00000467213 IGSF3O75054 1194 aa18.12■□□□□ 0.49
CHD1L-205ENST00000467213 SFPQP23246 707 aaKnown RBP eCLIP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms