RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 RIMBP2O15034 1052 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
PTPDC1-203ENST00000467049 PAPPA2Q9BXP8 1791 aa11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 VIL1P09327 827 aaKnown RBP11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 KIF4BQ2VIQ3 1234 aa11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 RUNDC1Q96C34 613 aa11.65□□□□□ -0.54
PTPDC1-203ENST00000467049 ADM5C9JUS6 153 aa11.64□□□□□ -0.55
PTPDC1-203ENST00000467049 ATP5J2-PTCD1G3V325 749 aa11.64□□□□□ -0.55
PTPDC1-203ENST00000467049 EGFRP00533 1210 aa11.64□□□□□ -0.55
PTPDC1-203ENST00000467049 MYBBP1AQ9BQG0 1328 aaKnown RBP11.64□□□□□ -0.55
PTPDC1-203ENST00000467049 ZNF646O15015 1829 aaPredicted RBP11.64□□□□□ -0.55
PTPDC1-203ENST00000467049 SLC10A3P09131 477 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 CCDC146Q8IYE0 955 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 LAS1LQ9Y4W2 734 aaKnown RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 ZNF157P51786 506 aaPredicted RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 NEUROD2Q15784 382 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 RBM26Q5T8P6 1007 aaKnown RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 ZBTB38Q8NAP3 1195 aaPredicted RBP11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 AGBL3Q8NEM8 1001 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
PTPDC1-203ENST00000467049 UFL1O94874 794 aa11.62□□□□□ -0.55
PTPDC1-203ENST00000467049 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
PTPDC1-203ENST00000467049 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
PTPDC1-203ENST00000467049 CDCA5Q96FF9 252 aa11.62□□□□□ -0.55
PTPDC1-203ENST00000467049 RNF186Q9NXI6 227 aa11.62□□□□□ -0.55
PTPDC1-203ENST00000467049 GGA1Q9UJY5 639 aa11.62□□□□□ -0.55
PTPDC1-203ENST00000467049 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 FKBP1BP68106 108 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 G3V3G9 751 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 PCCAP05165 728 aaPredicted RBP11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 WDR43Q15061 677 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 RTL5Q5HYW3 569 aaPredicted RBP11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 RSBN1LQ6PCB5 846 aaPredicted RBP11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
PTPDC1-203ENST00000467049 PDE8AO60658 829 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 RASAL3Q86YV0 1011 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 CSRNP1Q96S65 589 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 GMLQ99445 158 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
PTPDC1-203ENST00000467049 ASTN2O75129 1339 aaPredicted RBP11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 XDHP47989 1333 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 TRPA1O75762 1119 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 ZNF853P0CG23 659 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 ZEB1P37275 1124 aaPredicted RBP11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 SCARF1Q14162 830 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 ANGEL2Q5VTE6 544 aaKnown RBP11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 CTU1Q7Z7A3 348 aaKnown RBP11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 MYD88Q99836 296 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 PCDH10Q9P2E7 1040 aa11.59□□□□□ -0.55
PTPDC1-203ENST00000467049 PDE4DIPQ5VU43 2346 aa11.58□□□□□ -0.56
PTPDC1-203ENST00000467049 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
PTPDC1-203ENST00000467049 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
PTPDC1-203ENST00000467049 USP17L3A6NCW0 530 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 USP17L4A6NCW7 530 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 USP17L8P0C7I0 530 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 USP17L1Q7RTZ2 530 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 PODNQ7Z5L7 613 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 METTL22Q9BUU2 404 aaPredicted RBP11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 PHAXQ9H814 394 aaKnown RBP11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 MYOZ2Q9NPC6 264 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 MED23Q9ULK4 1368 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 ECM29Q5VYK3 1845 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 GNAI1P63096 354 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 LAMB1P07942 1786 aa11.57□□□□□ -0.56
PTPDC1-203ENST00000467049 DDX58O95786 925 aaKnown RBP11.56□□□□□ -0.56
PTPDC1-203ENST00000467049 MMP14P50281 582 aa11.56□□□□□ -0.56
PTPDC1-203ENST00000467049 SOX10P56693 466 aa11.56□□□□□ -0.56
PTPDC1-203ENST00000467049 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
PTPDC1-203ENST00000467049 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
PTPDC1-203ENST00000467049 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
PTPDC1-203ENST00000467049 MYO3BQ8WXR4 1341 aa11.55□□□□□ -0.56
PTPDC1-203ENST00000467049 CTSWP56202 376 aa11.55□□□□□ -0.56
PTPDC1-203ENST00000467049 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms