RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
NPHP3-203ENST00000465756 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
NPHP3-203ENST00000465756 ANKRD31Q8N7Z5 1873 aa13.41□□□□□ -0.26
NPHP3-203ENST00000465756 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
NPHP3-203ENST00000465756 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
NPHP3-203ENST00000465756 GNAI2P04899 355 aa13.41□□□□□ -0.26
NPHP3-203ENST00000465756 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
NPHP3-203ENST00000465756 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
NPHP3-203ENST00000465756 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
NPHP3-203ENST00000465756 PODNQ7Z5L7 613 aa13.4□□□□□ -0.26
NPHP3-203ENST00000465756 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
NPHP3-203ENST00000465756 COA1Q9GZY4 146 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 CSF1RP07333 972 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 CEP126Q9P2H0 1117 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 ITPRIPQ8IWB1 547 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 GREM2Q9H772 168 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 SLC5A1P13866 664 aa13.39□□□□□ -0.27
NPHP3-203ENST00000465756 RRAGCQ9HB90 399 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 AKAP2Q9Y2D5 859 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
NPHP3-203ENST00000465756 G3BP1Q13283 466 aaKnown RBP eCLIP13.38□□□□□ -0.27
NPHP3-203ENST00000465756 INTS3Q68E01 1043 aaKnown RBP13.38□□□□□ -0.27
NPHP3-203ENST00000465756 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
NPHP3-203ENST00000465756 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 UBE4AQ14139 1066 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 AOC3Q16853 763 aa13.38□□□□□ -0.27
NPHP3-203ENST00000465756 LDHDQ86WU2 507 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 TBC1D16Q8TBP0 767 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 UTYO14607 1347 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 LAMB2P55268 1798 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 MED23Q9ULK4 1368 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 GPSM2P81274 684 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 SLX4Q8IY92 1834 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-203ENST00000465756 GORABQ5T7V8 394 aa13.37□□□□□ -0.27
NPHP3-203ENST00000465756 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
NPHP3-203ENST00000465756 EAPPQ56P03 285 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-203ENST00000465756 USP50Q70EL3 339 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-203ENST00000465756 FZD9O00144 591 aa13.36□□□□□ -0.27
NPHP3-203ENST00000465756 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
NPHP3-203ENST00000465756 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
NPHP3-203ENST00000465756 PLIN1O60240 522 aa13.36□□□□□ -0.27
NPHP3-203ENST00000465756 IL15P40933 162 aaPredicted RBP13.36□□□□□ -0.27
NPHP3-203ENST00000465756 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
NPHP3-203ENST00000465756 ADARB2Q9NS39 739 aaKnown RBP13.36□□□□□ -0.27
NPHP3-203ENST00000465756 ECE2O60344 883 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 EPHX2P34913 555 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 ERC1Q8IUD2 1116 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 DPF2Q92785 391 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 SUCLG2Q96I99 432 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 MINPP1Q9UNW1 487 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 AGBL3Q8NEM8 1001 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 MAST3O60307 1309 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 MYO1BO43795 1136 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 APLP1P51693 650 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 CHRNDQ07001 517 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
NPHP3-203ENST00000465756 NF2P35240 595 aa13.34□□□□□ -0.27
NPHP3-203ENST00000465756 BICC1Q9H694 974 aaKnown RBP13.34□□□□□ -0.27
NPHP3-203ENST00000465756 EP400Q96L91 3159 aa13.34□□□□□ -0.27
NPHP3-203ENST00000465756 TNRC6CQ9HCJ0 1690 aaKnown RBP13.33□□□□□ -0.27
NPHP3-203ENST00000465756 EYA2O00167 538 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 RABL6Q3YEC7 729 aaPredicted RBP13.33□□□□□ -0.28
NPHP3-203ENST00000465756 ZGPATQ8N5A5 531 aaKnown RBP13.33□□□□□ -0.28
NPHP3-203ENST00000465756 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 NMRK2Q9NPI5 230 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 CIAO1O76071 339 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 DDNO94850 711 aaPredicted RBP13.33□□□□□ -0.28
NPHP3-203ENST00000465756 CASP7P55210 303 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 TMOD2Q9NZR1 351 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 CACNA1SQ13698 1873 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
NPHP3-203ENST00000465756 FOXO4P98177 505 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 PUM3Q15397 648 aaKnown RBP13.32□□□□□ -0.28
NPHP3-203ENST00000465756 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
NPHP3-203ENST00000465756 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
NPHP3-203ENST00000465756 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
NPHP3-203ENST00000465756 TRIM27P14373 513 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 AAMPQ13685 434 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 MYH3P11055 1940 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
NPHP3-203ENST00000465756 DBNDD1Q9H9R9 158 aa13.32□□□□□ -0.28
NPHP3-203ENST00000465756 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
NPHP3-203ENST00000465756 RAD17O75943 681 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms