RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF3-204ENST00000465659 BRF1Q92994 677 aa15.09■□□□□ 0.01
ARHGEF3-204ENST00000465659 PGBD1Q96JS3 809 aa15.09■□□□□ 0.01
ARHGEF3-204ENST00000465659 PFKFB2O60825 505 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 CAVIN2O95810 425 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 CAMK4Q16566 473 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 HELLSQ9NRZ9 838 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 SPEF2Q9C093 1822 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 H7C1W4 665 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 FOXO4P98177 505 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 PLCB2Q00722 1185 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 CCDC129Q6ZRS4 1044 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 DNAJC2Q99543 621 aaKnown RBP15.08■□□□□ 0
ARHGEF3-204ENST00000465659 DSCC1Q9BVC3 393 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 AGXT2Q9BYV1 514 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 CBX8Q9HC52 389 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 CFAP45Q9UL16 551 aa15.08■□□□□ 0
ARHGEF3-204ENST00000465659 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
ARHGEF3-204ENST00000465659 NAA16Q6N069 864 aaPredicted RBP15.07■□□□□ 0
ARHGEF3-204ENST00000465659 TDRD7Q8NHU6 1098 aaKnown RBP15.07■□□□□ 0
ARHGEF3-204ENST00000465659 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
ARHGEF3-204ENST00000465659 SEC62Q99442 399 aaKnown RBP15.07■□□□□ 0
ARHGEF3-204ENST00000465659 SCRN1Q12765 414 aa15.07■□□□□ 0
ARHGEF3-204ENST00000465659 ANO6Q4KMQ2 910 aa15.07■□□□□ 0
ARHGEF3-204ENST00000465659 DHX32Q7L7V1 743 aaKnown RBP15.07■□□□□ 0
ARHGEF3-204ENST00000465659 C17orf53Q8N3J3 647 aaPredicted RBP15.07■□□□□ 0
ARHGEF3-204ENST00000465659 CHMP3Q9Y3E7 222 aa15.07■□□□□ 0
ARHGEF3-204ENST00000465659 NR1I2O75469 434 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 LMBR1LQ6UX01 489 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 ATG9AQ7Z3C6 839 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.06■□□□□ 0
ARHGEF3-204ENST00000465659 LUZP1Q86V48 1076 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 PYCARDQ9ULZ3 195 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 NDUFB9Q9Y6M9 179 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 TJP1Q07157 1748 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 ATP5J2-PTCD1G3V325 749 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 PTCD1O75127 700 aaKnown RBP15.06■□□□□ 0
ARHGEF3-204ENST00000465659 EXOSC10Q01780 885 aaKnown RBP15.06■□□□□ 0
ARHGEF3-204ENST00000465659 STOX1Q6ZVD7 989 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 DDX46Q7L014 1031 aaKnown RBP15.06■□□□□ 0
ARHGEF3-204ENST00000465659 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
ARHGEF3-204ENST00000465659 H3BQV1 296 aa15.05■□□□□ 0
ARHGEF3-204ENST00000465659 ADD1P35611 737 aaKnown RBP15.05■□□□□ 0
ARHGEF3-204ENST00000465659 IFFO2Q5TF58 517 aa15.05■□□□□ 0
ARHGEF3-204ENST00000465659 ATL3Q6DD88 541 aa15.05■□□□□ 0
ARHGEF3-204ENST00000465659 PLA2G4DQ86XP0 818 aa15.05■□□□□ 0
ARHGEF3-204ENST00000465659 UBR2Q8IWV8 1755 aa15.05■□□□□ -0
ARHGEF3-204ENST00000465659 CHGBP05060 677 aa15.05■□□□□ -0
ARHGEF3-204ENST00000465659 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ -0
ARHGEF3-204ENST00000465659 PIP4K2AP48426 406 aaPredicted RBP15.05■□□□□ -0
ARHGEF3-204ENST00000465659 ZMYM1Q5SVZ6 1142 aa15.05■□□□□ -0
ARHGEF3-204ENST00000465659 NSUN7Q8NE18 718 aaKnown RBP15.05■□□□□ -0
ARHGEF3-204ENST00000465659 DCCP43146 1447 aa15.05■□□□□ -0
ARHGEF3-204ENST00000465659 CABP4P57796 275 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 SPC24Q8NBT2 197 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 BICD2Q8TD16 824 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 PAG1Q9NWQ8 432 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 RCOR1Q9UKL0 485 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 IL15P40933 162 aaPredicted RBP15.04■□□□□ -0
ARHGEF3-204ENST00000465659 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 FBXL16Q8N461 479 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 KIF3AQ9Y496 699 aa15.04■□□□□ -0
ARHGEF3-204ENST00000465659 SALL1Q9NSC2 1324 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CSB-PGBD3P0DP91 1061 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 ZNF75DP51815 510 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CHMP4CQ96CF2 233 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 ATG3Q9NT62 314 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CPDO75976 1380 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 NBPF26B4DH59 902 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CTAGE5O15320 804 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CTDNEP1O95476 244 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 NBPF14Q5TI25 921 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 NBPF10Q6P3W6 841 aaKnown RBP15.03■□□□□ -0
ARHGEF3-204ENST00000465659 NBPF15Q8N660 670 aa15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CWC25Q9NXE8 425 aaPredicted RBP15.03■□□□□ -0
ARHGEF3-204ENST00000465659 CDC25BP30305 580 aa15.02■□□□□ -0
ARHGEF3-204ENST00000465659 ZNF165P49910 485 aa15.02■□□□□ -0
ARHGEF3-204ENST00000465659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.02■□□□□ -0
ARHGEF3-204ENST00000465659 DDX11Q96FC9 970 aa15.02■□□□□ -0
ARHGEF3-204ENST00000465659 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
ARHGEF3-204ENST00000465659 GOLIM4O00461 696 aa15.02□□□□□ -0.01
ARHGEF3-204ENST00000465659 CIAO1O76071 339 aa15.02□□□□□ -0.01
ARHGEF3-204ENST00000465659 PTGS1P23219 599 aa15.02□□□□□ -0.01
ARHGEF3-204ENST00000465659 FGD1P98174 961 aa15.02□□□□□ -0.01
ARHGEF3-204ENST00000465659 ZNF274Q96GC6 653 aaPredicted RBP15.02□□□□□ -0.01
ARHGEF3-204ENST00000465659 LRRC2Q9BYS8 371 aa15.01□□□□□ -0.01
ARHGEF3-204ENST00000465659 PAPPAQ13219 1627 aa15.01□□□□□ -0.01
ARHGEF3-204ENST00000465659 PTPDC1A2A3K4 754 aa15.01□□□□□ -0.01
ARHGEF3-204ENST00000465659 HSPD1P10809 573 aaKnown RBP15.01□□□□□ -0.01
ARHGEF3-204ENST00000465659 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
ARHGEF3-204ENST00000465659 E7EWF7 191 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 EYA2O00167 538 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 EVCP57679 992 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 CCDC191Q8NCU4 936 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 TRIM5Q9C035 493 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 RNF113AO15541 343 aaKnown RBP15□□□□□ -0.01
ARHGEF3-204ENST00000465659 ATF3P18847 181 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 APOBRQ0VD83 1088 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 CHAF1AQ13111 956 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms