RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
SMC4-205ENST00000465563 TP53INP1Q96A56 240 aa10.75□□□□□ -0.69
SMC4-205ENST00000465563 DEAF1O75398 565 aaPredicted RBP10.74□□□□□ -0.69
SMC4-205ENST00000465563 ATP2B4P23634 1241 aa10.74□□□□□ -0.69
SMC4-205ENST00000465563 IL22RA1Q8N6P7 574 aa10.74□□□□□ -0.69
SMC4-205ENST00000465563 ABTB2Q8N961 1025 aa10.74□□□□□ -0.69
SMC4-205ENST00000465563 GPR152Q8TDT2 470 aa10.74□□□□□ -0.69
SMC4-205ENST00000465563 WFDC12Q8WWY7 111 aa10.74□□□□□ -0.69
SMC4-205ENST00000465563 PRSS36Q5K4E3 855 aa10.73□□□□□ -0.69
SMC4-205ENST00000465563 OR13H1Q8NG92 308 aa10.73□□□□□ -0.69
SMC4-205ENST00000465563 SSBP4Q9BWG4 385 aaPredicted RBP10.73□□□□□ -0.69
SMC4-205ENST00000465563 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
SMC4-205ENST00000465563 ARID3CA6NKF2 412 aa10.72□□□□□ -0.69
SMC4-205ENST00000465563 DLL1O00548 723 aa10.72□□□□□ -0.69
SMC4-205ENST00000465563 IREB2P48200 963 aaKnown RBP10.72□□□□□ -0.69
SMC4-205ENST00000465563 ZBTB39O15060 712 aa10.71□□□□□ -0.69
SMC4-205ENST00000465563 HYAL2Q12891 473 aa10.71□□□□□ -0.69
SMC4-205ENST00000465563 TTC39BQ5VTQ0 682 aaPredicted RBP10.71□□□□□ -0.69
SMC4-205ENST00000465563 CACTIN-AS1Q8N1I8 211 aa10.71□□□□□ -0.69
SMC4-205ENST00000465563 SRA1Q9HD15 236 aaKnown RBP10.71□□□□□ -0.69
SMC4-205ENST00000465563 NOS3P29474 1203 aa10.7□□□□□ -0.7
SMC4-205ENST00000465563 SPACA7Q96KW9 195 aa10.7□□□□□ -0.7
SMC4-205ENST00000465563 SEPT3Q9UH03 358 aa10.7□□□□□ -0.7
SMC4-205ENST00000465563 TRIM33Q9UPN9 1127 aa10.7□□□□□ -0.7
SMC4-205ENST00000465563 MAP4K3Q8IVH8 894 aa10.69□□□□□ -0.7
SMC4-205ENST00000465563 DCAF11Q8TEB1 546 aa10.69□□□□□ -0.7
SMC4-205ENST00000465563 MUC3BQ9H195 1237 aa10.69□□□□□ -0.7
SMC4-205ENST00000465563 GTF3C3Q9Y5Q9 886 aa10.69□□□□□ -0.7
SMC4-205ENST00000465563 SCO2A0A1W2PP80 73 aa10.68□□□□□ -0.7
SMC4-205ENST00000465563 SCNN1AP37088 669 aa10.68□□□□□ -0.7
SMC4-205ENST00000465563 FOXD4L6Q3SYB3 417 aaPredicted RBP10.68□□□□□ -0.7
SMC4-205ENST00000465563 COL13A1Q5TAT6 717 aaPredicted RBP10.68□□□□□ -0.7
SMC4-205ENST00000465563 FOXD4L3Q6VB84 417 aaPredicted RBP10.68□□□□□ -0.7
SMC4-205ENST00000465563 ABI2Q9NYB9 513 aaPredicted RBP10.68□□□□□ -0.7
SMC4-205ENST00000465563 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
SMC4-205ENST00000465563 SETDB1Q15047 1291 aa10.66□□□□□ -0.7
SMC4-205ENST00000465563 AKTIPQ9H8T0 292 aa10.66□□□□□ -0.7
SMC4-205ENST00000465563 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
SMC4-205ENST00000465563 SMNDC1O75940 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMC4-205ENST00000465563 PDE12Q6L8Q7 609 aaKnown RBP10.65□□□□□ -0.7
SMC4-205ENST00000465563 TMEM130Q8N3G9 435 aa10.65□□□□□ -0.7
SMC4-205ENST00000465563 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
SMC4-205ENST00000465563 ELP3Q9H9T3 547 aa10.65□□□□□ -0.7
SMC4-205ENST00000465563 KIF4AO95239 1232 aa10.64□□□□□ -0.71
SMC4-205ENST00000465563 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
SMC4-205ENST00000465563 ATP11AP98196 1134 aa10.64□□□□□ -0.71
SMC4-205ENST00000465563 CEP135Q66GS9 1140 aa10.64□□□□□ -0.71
SMC4-205ENST00000465563 ATCAYQ86WG3 371 aa10.64□□□□□ -0.71
SMC4-205ENST00000465563 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
SMC4-205ENST00000465563 MEGF10Q96KG7 1140 aa10.64□□□□□ -0.71
SMC4-205ENST00000465563 CCDC82Q8N4S0 544 aa10.63□□□□□ -0.71
SMC4-205ENST00000465563 LACRTQ9GZZ8 138 aa10.63□□□□□ -0.71
SMC4-205ENST00000465563 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
SMC4-205ENST00000465563 ALX3O95076 343 aa10.62□□□□□ -0.71
SMC4-205ENST00000465563 CYP2E1P05181 493 aaPredicted RBP10.62□□□□□ -0.71
SMC4-205ENST00000465563 ZNF438Q7Z4V0 828 aa10.62□□□□□ -0.71
SMC4-205ENST00000465563 NCAPG2Q86XI2 1143 aa10.62□□□□□ -0.71
SMC4-205ENST00000465563 RASSF4Q9H2L5 321 aa10.62□□□□□ -0.71
SMC4-205ENST00000465563 LINC01387J3KSC0 135 aa10.61□□□□□ -0.71
SMC4-205ENST00000465563 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
SMC4-205ENST00000465563 PCSK2P16519 638 aa10.61□□□□□ -0.71
SMC4-205ENST00000465563 CDC27P30260 824 aa10.61□□□□□ -0.71
SMC4-205ENST00000465563 NOM1Q5C9Z4 860 aaKnown RBP10.61□□□□□ -0.71
SMC4-205ENST00000465563 ARTNQ5T4W7 220 aa10.61□□□□□ -0.71
SMC4-205ENST00000465563 DZIP1LQ8IYY4 767 aaKnown RBP10.61□□□□□ -0.71
SMC4-205ENST00000465563 TMEM63CQ9P1W3 806 aa10.61□□□□□ -0.71
SMC4-205ENST00000465563 CEP120Q8N960 986 aa10.6□□□□□ -0.71
SMC4-205ENST00000465563 TTC16Q8NEE8 873 aa10.6□□□□□ -0.71
SMC4-205ENST00000465563 EDEM1Q92611 657 aa10.6□□□□□ -0.71
SMC4-205ENST00000465563 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
SMC4-205ENST00000465563 ZFP64Q9NPA5 681 aa10.6□□□□□ -0.71
SMC4-205ENST00000465563 DNM1Q05193 864 aaKnown RBP10.59□□□□□ -0.71
SMC4-205ENST00000465563 XKR5Q6UX68 686 aa10.59□□□□□ -0.71
SMC4-205ENST00000465563 TMEM88BA6NKF7 163 aa10.58□□□□□ -0.72
SMC4-205ENST00000465563 SSFA2P28290 1259 aa10.58□□□□□ -0.72
SMC4-205ENST00000465563 TXNDC11Q6PKC3 985 aa10.58□□□□□ -0.72
SMC4-205ENST00000465563 PRR23CQ6ZRP0 262 aa10.58□□□□□ -0.72
SMC4-205ENST00000465563 GALNT11Q8NCW6 608 aa10.58□□□□□ -0.72
SMC4-205ENST00000465563 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
SMC4-205ENST00000465563 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
SMC4-205ENST00000465563 FAM177BA6PVY3 158 aa10.57□□□□□ -0.72
SMC4-205ENST00000465563 PDGFAP04085 211 aa10.57□□□□□ -0.72
SMC4-205ENST00000465563 CD68P34810 354 aaPredicted RBP10.57□□□□□ -0.72
SMC4-205ENST00000465563 FAM117BQ6P1L5 589 aa10.57□□□□□ -0.72
SMC4-205ENST00000465563 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
SMC4-205ENST00000465563 PTPRAP18433 802 aa10.56□□□□□ -0.72
SMC4-205ENST00000465563 MPSTP25325 297 aa10.56□□□□□ -0.72
SMC4-205ENST00000465563 MZF1P28698 734 aaPredicted RBP10.56□□□□□ -0.72
SMC4-205ENST00000465563 CDC25BP30305 580 aa10.56□□□□□ -0.72
SMC4-205ENST00000465563 EIF1AXP47813 144 aaKnown RBP10.56□□□□□ -0.72
SMC4-205ENST00000465563 C8orf34Q49A92 452 aa10.56□□□□□ -0.72
SMC4-205ENST00000465563 Q6ZS46 218 aa10.56□□□□□ -0.72
SMC4-205ENST00000465563 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.56□□□□□ -0.72
SMC4-205ENST00000465563 AGGF1Q8N302 714 aaeCLIP10.56□□□□□ -0.72
SMC4-205ENST00000465563 GGNBP2Q9H3C7 697 aa10.56□□□□□ -0.72
SMC4-205ENST00000465563 GLB1P16278 677 aa10.55□□□□□ -0.72
SMC4-205ENST00000465563 CES1P23141 567 aa10.55□□□□□ -0.72
SMC4-205ENST00000465563 LRP8Q14114 963 aa10.55□□□□□ -0.72
SMC4-205ENST00000465563 ALKBH2Q6NS38 261 aa10.55□□□□□ -0.72
SMC4-205ENST00000465563 ADAMTSL4Q6UY14 1074 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms