RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
ATF3-208ENST00000465155 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
ATF3-208ENST00000465155 SOCS7O14512 581 aa16.53■□□□□ 0.24
ATF3-208ENST00000465155 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
ATF3-208ENST00000465155 PTGER2P43116 358 aa16.53■□□□□ 0.24
ATF3-208ENST00000465155 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
ATF3-208ENST00000465155 C2CD5Q86YS7 1000 aa16.53■□□□□ 0.24
ATF3-208ENST00000465155 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
ATF3-208ENST00000465155 A0A1B0GUL6 1792 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 H0YIN7 160 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 NPR1P16066 1061 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 TFCP2Q12800 502 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 MASTLQ96GX5 879 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
ATF3-208ENST00000465155 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
ATF3-208ENST00000465155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
ATF3-208ENST00000465155 DLEC1Q9Y238 1755 aa16.52■□□□□ 0.23
ATF3-208ENST00000465155 CHRNA5P30532 468 aa16.52■□□□□ 0.23
ATF3-208ENST00000465155 METTL24Q5JXM2 366 aa16.52■□□□□ 0.23
ATF3-208ENST00000465155 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
ATF3-208ENST00000465155 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
ATF3-208ENST00000465155 ZNF622Q969S3 477 aaKnown RBP eCLIP16.51■□□□□ 0.236e-8■□□□□ 9.4
ATF3-208ENST00000465155 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
ATF3-208ENST00000465155 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
ATF3-208ENST00000465155 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
ATF3-208ENST00000465155 PDE4AP27815 886 aa16.5■□□□□ 0.23
ATF3-208ENST00000465155 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
ATF3-208ENST00000465155 RGS3P49796 1198 aa16.49■□□□□ 0.23
ATF3-208ENST00000465155 STYK1Q6J9G0 422 aa16.49■□□□□ 0.23
ATF3-208ENST00000465155 HELBQ8NG08 1087 aaPredicted RBP16.49■□□□□ 0.23
ATF3-208ENST00000465155 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
ATF3-208ENST00000465155 KIAA1551Q9HCM1 1747 aa16.49■□□□□ 0.23
ATF3-208ENST00000465155 BBOX1O75936 387 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 CHRNDQ07001 517 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 TNNI3KQ59H18 835 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 AACSQ86V21 672 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 FPGT-TNNI3KV9GXZ4 949 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 TAF5LO75529 589 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 PDE8BO95263 885 aa16.48■□□□□ 0.23
ATF3-208ENST00000465155 OTUD7AQ8TE49 926 aaPredicted RBP16.48■□□□□ 0.23
ATF3-208ENST00000465155 EAF2Q96CJ1 260 aaPredicted RBP16.48■□□□□ 0.23
ATF3-208ENST00000465155 LRRC37AA6NMS7 1700 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 ZNF609O15014 1411 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 PPEF1O14829 653 aaPredicted RBP16.47■□□□□ 0.23
ATF3-208ENST00000465155 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
ATF3-208ENST00000465155 DPEP1P16444 411 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 GPR108Q9NPR9 543 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 AKAP2Q9Y2D5 859 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
ATF3-208ENST00000465155 TGFB2P61812 414 aa16.46■□□□□ 0.23
ATF3-208ENST00000465155 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
ATF3-208ENST00000465155 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
ATF3-208ENST00000465155 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
ATF3-208ENST00000465155 A0A1B0GUL7 405 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 TIMM10P62072 90 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
ATF3-208ENST00000465155 ATP2B3Q16720 1220 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
ATF3-208ENST00000465155 PLEKHM2Q8IWE5 1019 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
ATF3-208ENST00000465155 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
ATF3-208ENST00000465155 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
ATF3-208ENST00000465155 SNAP23O00161 211 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 MX1P20591 662 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 KCNA3P22001 575 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 ANKIB1Q9P2G1 1089 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 DBNLQ9UJU6 430 aaKnown RBP16.44■□□□□ 0.22
ATF3-208ENST00000465155 ATP6V0A2Q9Y487 856 aa16.44■□□□□ 0.22
ATF3-208ENST00000465155 FGFR2P21802 821 aa16.43■□□□□ 0.22
ATF3-208ENST00000465155 TTLL6Q8N841 843 aa16.43■□□□□ 0.22
ATF3-208ENST00000465155 LPIN2Q92539 896 aa16.43■□□□□ 0.22
ATF3-208ENST00000465155 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
ATF3-208ENST00000465155 PDE1AP54750 535 aa16.42■□□□□ 0.22
ATF3-208ENST00000465155 GPSM2P81274 684 aa16.42■□□□□ 0.22
ATF3-208ENST00000465155 TSHZ3Q63HK5 1081 aa16.42■□□□□ 0.22
ATF3-208ENST00000465155 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
ATF3-208ENST00000465155 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
ATF3-208ENST00000465155 XDHP47989 1333 aa16.42■□□□□ 0.22
ATF3-208ENST00000465155 WTIPA6NIX2 430 aaPredicted RBP16.41■□□□□ 0.22
ATF3-208ENST00000465155 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
ATF3-208ENST00000465155 SLC5A1P13866 664 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 KCNJ4P48050 445 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
ATF3-208ENST00000465155 LTBP1Q14766 1721 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 IFIT1P09914 478 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms