RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
TNRC18-209ENST00000464852 PRPF38BQ5VTL8 546 aaKnown RBP13.41□□□□□ -0.26
TNRC18-209ENST00000464852 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
TNRC18-209ENST00000464852 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
TNRC18-209ENST00000464852 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
TNRC18-209ENST00000464852 TMEM88BA6NKF7 163 aa13.4□□□□□ -0.26
TNRC18-209ENST00000464852 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
TNRC18-209ENST00000464852 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
TNRC18-209ENST00000464852 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
TNRC18-209ENST00000464852 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
TNRC18-209ENST00000464852 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
TNRC18-209ENST00000464852 COPRSQ9NQ92 184 aa13.4□□□□□ -0.26
TNRC18-209ENST00000464852 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
TNRC18-209ENST00000464852 NPHP1O15259 732 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 SERPINB2P05120 415 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
TNRC18-209ENST00000464852 NUCB1Q02818 461 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.271e-6■□□□□ 10.1
TNRC18-209ENST00000464852 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 NUTM1Q86Y26 1132 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 CHMP3Q9Y3E7 222 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
TNRC18-209ENST00000464852 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
TNRC18-209ENST00000464852 ITGBL1O95965 494 aaPredicted RBP13.38□□□□□ -0.27
TNRC18-209ENST00000464852 RFX5P48382 616 aaPredicted RBP13.38□□□□□ -0.27
TNRC18-209ENST00000464852 CTSWP56202 376 aa13.38□□□□□ -0.27
TNRC18-209ENST00000464852 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
TNRC18-209ENST00000464852 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
TNRC18-209ENST00000464852 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
TNRC18-209ENST00000464852 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
TNRC18-209ENST00000464852 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
TNRC18-209ENST00000464852 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
TNRC18-209ENST00000464852 ANKRD18BA2A2Z9 1011 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 RASSF10A6NK89 507 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
TNRC18-209ENST00000464852 PTPN12Q05209 780 aaKnown RBP13.37□□□□□ -0.27
TNRC18-209ENST00000464852 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 TSKSQ9UJT2 592 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 EXOC6BQ9Y2D4 811 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 MYH3P11055 1940 aa13.37□□□□□ -0.27
TNRC18-209ENST00000464852 ST5P78524 1137 aa13.36□□□□□ -0.27
TNRC18-209ENST00000464852 OS9Q13438 667 aaPredicted RBP13.36□□□□□ -0.27
TNRC18-209ENST00000464852 PRR5LQ6MZQ0 368 aa13.36□□□□□ -0.27
TNRC18-209ENST00000464852 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
TNRC18-209ENST00000464852 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
TNRC18-209ENST00000464852 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
TNRC18-209ENST00000464852 ITGA6P23229 1130 aa13.35□□□□□ -0.27
TNRC18-209ENST00000464852 DDR1Q08345 913 aa13.35□□□□□ -0.27
TNRC18-209ENST00000464852 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
TNRC18-209ENST00000464852 KIF1BPQ96EK5 621 aa13.35□□□□□ -0.27
TNRC18-209ENST00000464852 GREM2Q9H772 168 aa13.35□□□□□ -0.27
TNRC18-209ENST00000464852 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
TNRC18-209ENST00000464852 APBB1O00213 710 aa13.34□□□□□ -0.27
TNRC18-209ENST00000464852 NFKBIEO00221 500 aa13.34□□□□□ -0.27
TNRC18-209ENST00000464852 CIAO1O76071 339 aa13.34□□□□□ -0.27
TNRC18-209ENST00000464852 IL15P40933 162 aaPredicted RBP13.34□□□□□ -0.27
TNRC18-209ENST00000464852 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
TNRC18-209ENST00000464852 RHPN1Q8TCX5 695 aa13.34□□□□□ -0.27
TNRC18-209ENST00000464852 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
TNRC18-209ENST00000464852 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
TNRC18-209ENST00000464852 RIC1Q4ADV7 1423 aa13.33□□□□□ -0.28
TNRC18-209ENST00000464852 THSD7BQ9C0I4 1608 aa13.33□□□□□ -0.28
TNRC18-209ENST00000464852 EYA2O00167 538 aa13.33□□□□□ -0.28
TNRC18-209ENST00000464852 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
TNRC18-209ENST00000464852 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
TNRC18-209ENST00000464852 LNPKQ9C0E8 428 aa13.33□□□□□ -0.28
TNRC18-209ENST00000464852 SIL1Q9H173 461 aa13.33□□□□□ -0.28
TNRC18-209ENST00000464852 SCN4AP35499 1836 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
TNRC18-209ENST00000464852 DDNO94850 711 aaPredicted RBP13.32□□□□□ -0.28
TNRC18-209ENST00000464852 SASH1O94885 1247 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 SOX10P56693 466 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 LDHAL6AQ6ZMR3 332 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 CDC5LQ99459 802 aaKnown RBP13.32□□□□□ -0.28
TNRC18-209ENST00000464852 LTBP1Q14766 1721 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 LAMB2P55268 1798 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
TNRC18-209ENST00000464852 FER1L6Q2WGJ9 1857 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
TNRC18-209ENST00000464852 PDE6BP35913 854 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
TNRC18-209ENST00000464852 DGKZQ13574 1117 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 DDX46Q7L014 1031 aaKnown RBP13.31□□□□□ -0.28
TNRC18-209ENST00000464852 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 LDHDQ86WU2 507 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 CLASRPQ8N2M8 674 aaKnown RBP13.31□□□□□ -0.28
TNRC18-209ENST00000464852 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 RIPOR2Q9Y4F9 1068 aa13.31□□□□□ -0.28
TNRC18-209ENST00000464852 RGS3P49796 1198 aa13.3□□□□□ -0.28
TNRC18-209ENST00000464852 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
TNRC18-209ENST00000464852 CRY2Q49AN0 593 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms