RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 ZNF277Q9NRM2 450 aaPredicted RBP16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 GGA1Q9UJY5 639 aa16.74■□□□□ 0.27
TSPAN1-202ENST00000464786 CACNA1SQ13698 1873 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 C6orf229H3BNL8 230 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 MTX1Q13505 466 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 LEMD3Q9Y2U8 911 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 TAF1P21675 1872 aa16.73■□□□□ 0.27
TSPAN1-202ENST00000464786 LARGE2Q8N3Y3 721 aa16.72■□□□□ 0.27
TSPAN1-202ENST00000464786 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
TSPAN1-202ENST00000464786 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
TSPAN1-202ENST00000464786 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
TSPAN1-202ENST00000464786 SNED1Q8TER0 1413 aa16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 PRELPP51888 382 aa16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 RRP1P56182 461 aaKnown RBP16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 WASHC4Q2M389 1173 aa16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 DPY19L2Q6NUT2 758 aa16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 TBC1D16Q8TBP0 767 aa16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 ZC3H12CQ9C0D7 883 aaKnown RBP16.71■□□□□ 0.27
TSPAN1-202ENST00000464786 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 SBF1O95248 1867 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 UFL1O94874 794 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 ATP8B2P98198 1209 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 CHRNDQ07001 517 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 ZNF784Q8NCA9 323 aaPredicted RBP16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
TSPAN1-202ENST00000464786 EYA2O00167 538 aa16.69■□□□□ 0.26
TSPAN1-202ENST00000464786 KCNJ4P48050 445 aa16.69■□□□□ 0.26
TSPAN1-202ENST00000464786 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
TSPAN1-202ENST00000464786 NIM1KQ8IY84 436 aa16.69■□□□□ 0.26
TSPAN1-202ENST00000464786 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
TSPAN1-202ENST00000464786 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
TSPAN1-202ENST00000464786 G3V3G9 751 aa16.68■□□□□ 0.26
TSPAN1-202ENST00000464786 CIAO1O76071 339 aa16.68■□□□□ 0.26
TSPAN1-202ENST00000464786 EIF6P56537 245 aaKnown RBP16.68■□□□□ 0.26
TSPAN1-202ENST00000464786 AOC3Q16853 763 aa16.68■□□□□ 0.26
TSPAN1-202ENST00000464786 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
TSPAN1-202ENST00000464786 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
TSPAN1-202ENST00000464786 FZD9O00144 591 aa16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 PUS3Q9BZE2 481 aaKnown RBP16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 ZNF804BA4D1E1 1349 aa16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 KDM2BQ8NHM5 1336 aa16.67■□□□□ 0.26
TSPAN1-202ENST00000464786 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 LRRC37AA6NMS7 1700 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 IL15P40933 162 aaPredicted RBP16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 UBE4AQ14139 1066 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 CCDC88AQ3V6T2 1871 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 LRRC24Q50LG9 513 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 HELBQ8NG08 1087 aaPredicted RBP16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 CEP126Q9P2H0 1117 aa16.66■□□□□ 0.26
TSPAN1-202ENST00000464786 TAF5LO75529 589 aa16.65■□□□□ 0.26
TSPAN1-202ENST00000464786 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
TSPAN1-202ENST00000464786 COL4A1P02462 1669 aa16.65■□□□□ 0.26
TSPAN1-202ENST00000464786 PNMA6EA0A0J9YXQ4 647 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 HMMRO75330 724 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 PDE8BO95263 885 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 POLA2Q14181 598 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 TNIP1Q15025 636 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 DICER1Q9UPY3 1922 aaKnown RBP16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
TSPAN1-202ENST00000464786 AAMPQ13685 434 aa16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 CEP85Q6P2H3 762 aa16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 ATG9AQ7Z3C6 839 aa16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 SIL1Q9H173 461 aa16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 GPBP1L1Q9HC44 474 aaPredicted RBP16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 PA2G4Q9UQ80 394 aaKnown RBP16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
TSPAN1-202ENST00000464786 DOK7Q18PE1 504 aa16.62■□□□□ 0.25
TSPAN1-202ENST00000464786 GPC2Q8N158 579 aa16.62■□□□□ 0.25
TSPAN1-202ENST00000464786 WTIPA6NIX2 430 aaPredicted RBP16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 ECE2O60344 883 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 CIAPIN1Q6FI81 312 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 VGLL2Q8N8G2 317 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 LPIN2Q92539 896 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 GPR101Q96P66 508 aaPredicted RBP16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
TSPAN1-202ENST00000464786 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
TSPAN1-202ENST00000464786 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms