RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 RUFY3Q7L099 469 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 LINC00116Q8NCU8 138 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 PDRG1Q9NUG6 133 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
ATF3-207ENST00000464547 RPAP1Q9BWH6 1393 aaPredicted RBP11.8□□□□□ -0.52
ATF3-207ENST00000464547 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
ATF3-207ENST00000464547 PTMSP20962 102 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 CCDC158Q5M9N0 1113 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 ZMYM1Q5SVZ6 1142 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 VPS53Q5VIR6 699 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 LDHAL6AQ6ZMR3 332 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
ATF3-207ENST00000464547 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
ATF3-207ENST00000464547 CNNM1Q9NRU3 951 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 HELLSQ9NRZ9 838 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 ZNF831Q5JPB2 1677 aa11.8□□□□□ -0.52
ATF3-207ENST00000464547 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
ATF3-207ENST00000464547 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
ATF3-207ENST00000464547 THSD7AQ9UPZ6 1657 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 FAM177BA6PVY3 158 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
ATF3-207ENST00000464547 HCLS1P14317 486 aaPredicted RBP11.79□□□□□ -0.52
ATF3-207ENST00000464547 PSMA5P28066 241 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 SLFNL1Q499Z3 407 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 PTF1AQ7RTS3 328 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 HMG20BQ9P0W2 317 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
ATF3-207ENST00000464547 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
ATF3-207ENST00000464547 LRP5O75197 1615 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 NTSR2O95665 410 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 SCARF1Q14162 830 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 LARP6Q9BRS8 491 aaKnown RBP11.78□□□□□ -0.52
ATF3-207ENST00000464547 NIP7Q9Y221 180 aaKnown RBP eCLIP11.78□□□□□ -0.52
ATF3-207ENST00000464547 TAF6LQ9Y6J9 622 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 MYH3P11055 1940 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 ABCC12Q96J65 1359 aa11.78□□□□□ -0.52
ATF3-207ENST00000464547 LARGE1O95461 756 aa11.77□□□□□ -0.53
ATF3-207ENST00000464547 BRD1O95696 1058 aa11.77□□□□□ -0.53
ATF3-207ENST00000464547 RPS6KB1P23443 525 aa11.77□□□□□ -0.53
ATF3-207ENST00000464547 KCNQ4P56696 695 aa11.77□□□□□ -0.53
ATF3-207ENST00000464547 FKBP4Q02790 459 aaKnown RBP eCLIP11.77□□□□□ -0.53
ATF3-207ENST00000464547 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
ATF3-207ENST00000464547 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
ATF3-207ENST00000464547 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
ATF3-207ENST00000464547 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
ATF3-207ENST00000464547 ZNF652Q9Y2D9 606 aa11.77□□□□□ -0.53
ATF3-207ENST00000464547 BCORQ6W2J9 1755 aa11.77□□□□□ -0.53
ATF3-207ENST00000464547 GOLGA6L22H0YM25 854 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 M0R2C6 588 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 PDE8BO95263 885 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 FGFR2P21802 821 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 ZAP70P43403 619 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 COL9A3Q14050 684 aaPredicted RBP11.76□□□□□ -0.53
ATF3-207ENST00000464547 RC3H1Q5TC82 1133 aaKnown RBP11.76□□□□□ -0.53
ATF3-207ENST00000464547 MEX3CQ5U5Q3 659 aaKnown RBP11.76□□□□□ -0.53
ATF3-207ENST00000464547 BLOC1S2Q6QNY1 142 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 DDX60Q8IY21 1712 aaKnown RBP11.76□□□□□ -0.53
ATF3-207ENST00000464547 MAST3O60307 1309 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 MROH5Q6ZUA9 1318 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
ATF3-207ENST00000464547 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 RGL2O15211 777 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
ATF3-207ENST00000464547 HSPA1LP34931 641 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 KRT32Q14532 448 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
ATF3-207ENST00000464547 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
ATF3-207ENST00000464547 MCTP1Q6DN14 999 aa11.75□□□□□ -0.53
ATF3-207ENST00000464547 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
ATF3-207ENST00000464547 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
ATF3-207ENST00000464547 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
ATF3-207ENST00000464547 LAMB2P55268 1798 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 ZFYP08048 801 aaPredicted RBP11.74□□□□□ -0.53
ATF3-207ENST00000464547 CYP21A2P08686 494 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 MCAMP43121 646 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 PUM3Q15397 648 aaKnown RBP11.74□□□□□ -0.53
ATF3-207ENST00000464547 ME3Q16798 604 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms