RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 CCDC57Q2TAC2 916 aa23.63■■□□□ 1.37
POLR2J3-203ENST00000464525 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
POLR2J3-203ENST00000464525 CYP46A1Q9Y6A2 500 aa23.63■■□□□ 1.37
POLR2J3-203ENST00000464525 NHSQ6T4R5 1651 aa23.63■■□□□ 1.37
POLR2J3-203ENST00000464525 GOLIM4O00461 696 aa23.62■■□□□ 1.37
POLR2J3-203ENST00000464525 TRIM28Q13263 835 aaKnown RBP23.62■■□□□ 1.37
POLR2J3-203ENST00000464525 NLRP10Q86W26 655 aa23.62■■□□□ 1.37
POLR2J3-203ENST00000464525 NUP98P52948 1817 aa23.62■■□□□ 1.37
POLR2J3-203ENST00000464525 A0A1B0GUL7 405 aa23.62■■□□□ 1.37
POLR2J3-203ENST00000464525 ZNF609O15014 1411 aa23.62■■□□□ 1.37
POLR2J3-203ENST00000464525 PCCAP05165 728 aaPredicted RBP23.61■■□□□ 1.37
POLR2J3-203ENST00000464525 KLHL40Q2TBA0 621 aa23.61■■□□□ 1.37
POLR2J3-203ENST00000464525 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
POLR2J3-203ENST00000464525 HSP90AB3PQ58FF7 597 aa23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 VPS53Q5VIR6 699 aa23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 ZBTB38Q8NAP3 1195 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 TM6SF1Q9BZW5 370 aa23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 CCNL1Q9UK58 526 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 SBF2Q86WG5 1849 aa23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 COL5A3P25940 1745 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 FAM177BA6PVY3 158 aa23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 UBN2Q6ZU65 1347 aa23.6■■□□□ 1.37
POLR2J3-203ENST00000464525 CCDC83Q8IWF9 413 aa23.59■■□□□ 1.37
POLR2J3-203ENST00000464525 GPR108Q9NPR9 543 aa23.59■■□□□ 1.37
POLR2J3-203ENST00000464525 PAG1Q9NWQ8 432 aa23.59■■□□□ 1.37
POLR2J3-203ENST00000464525 CAMTA2O94983 1202 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 KRT27Q7Z3Y8 459 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 KBTBD3Q8NAB2 608 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 GPT2Q8TD30 523 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 CEP126Q9P2H0 1117 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 CICQ96RK0 1608 aaPredicted RBP23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 CIAO1O76071 339 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 ADORA1P30542 326 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 CAVIN1Q6NZI2 390 aaKnown RBP23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 NECAB1Q8N987 351 aa23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 TRMT112Q9UI30 125 aaKnown RBP23.58■■□□□ 1.37
POLR2J3-203ENST00000464525 BRWD3Q6RI45 1802 aa23.58■■□□□ 1.36
POLR2J3-203ENST00000464525 RREB1Q92766 1687 aa23.57■■□□□ 1.36
POLR2J3-203ENST00000464525 RPAP1Q9BWH6 1393 aaPredicted RBP23.57■■□□□ 1.36
POLR2J3-203ENST00000464525 ME3Q16798 604 aa23.57■■□□□ 1.36
POLR2J3-203ENST00000464525 NSFL1CQ9UNZ2 370 aaKnown RBP23.57■■□□□ 1.36
POLR2J3-203ENST00000464525 CSF1RP07333 972 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 ST3GAL1Q11201 340 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 MCMDC2Q4G0Z9 681 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 TAF7LQ5H9L4 462 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 ZNF34Q8IZ26 560 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 GRPEL1Q9HAV7 217 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 TPCN1Q9ULQ1 816 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 ANKRD36CQ5JPF3 1778 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 IFIT1P09914 478 aaKnown RBP23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 IFIT5Q13325 482 aaKnown RBP23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 GREM2Q9H772 168 aa23.56■■□□□ 1.36
POLR2J3-203ENST00000464525 RNF20Q5VTR2 975 aa23.55■■□□□ 1.36
POLR2J3-203ENST00000464525 GDPD2Q9HCC8 539 aa23.55■■□□□ 1.36
POLR2J3-203ENST00000464525 RBM27Q9P2N5 1060 aaKnown RBP23.55■■□□□ 1.36
POLR2J3-203ENST00000464525 PLA2G12BQ9BX93 195 aa23.55■■□□□ 1.36
POLR2J3-203ENST00000464525 SMC3Q9UQE7 1217 aa23.55■■□□□ 1.36
POLR2J3-203ENST00000464525 TRIM37O94972 964 aa23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 ZNF772Q68DY9 489 aaPredicted RBP23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 BLOC1S2Q6QNY1 142 aa23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 TTLL11Q8NHH1 800 aa23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 BCL11BQ9C0K0 894 aaPredicted RBP23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 SYT1P21579 422 aa23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 FKBP4Q02790 459 aaKnown RBP eCLIP23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 SUSD4Q5VX71 490 aa23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.54■■□□□ 1.36
POLR2J3-203ENST00000464525 GNPATO15228 680 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 ITGA6P23229 1130 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 PSMA5P28066 241 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 MRE11P49959 708 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 USPL1Q5W0Q7 1092 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 XAGE2Q96GT9 111 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 ZNF831Q5JPB2 1677 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 CNTNAP4Q9C0A0 1308 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 IRS4O14654 1257 aaPredicted RBP23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 RBM6P78332 1123 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 NIP7Q9Y221 180 aaKnown RBP eCLIP23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 WDR33Q9C0J8 1336 aaKnown RBP23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 TCHHQ07283 1943 aa23.53■■□□□ 1.36
POLR2J3-203ENST00000464525 GJB2P29033 226 aa23.52■■□□□ 1.36
POLR2J3-203ENST00000464525 GORABQ5T7V8 394 aa23.52■■□□□ 1.36
POLR2J3-203ENST00000464525 FAM196AQ6ZSG2 479 aa23.52■■□□□ 1.36
POLR2J3-203ENST00000464525 CYP21A2P08686 494 aa23.52■■□□□ 1.36
POLR2J3-203ENST00000464525 RPS6KB1P23443 525 aa23.52■■□□□ 1.36
POLR2J3-203ENST00000464525 SCARF1Q14162 830 aa23.52■■□□□ 1.36
POLR2J3-203ENST00000464525 PI16Q6UXB8 463 aa23.51■■□□□ 1.35
POLR2J3-203ENST00000464525 LDHAL6AQ6ZMR3 332 aa23.51■■□□□ 1.35
POLR2J3-203ENST00000464525 LRRC4BQ9NT99 713 aa23.51■■□□□ 1.35
POLR2J3-203ENST00000464525 RFX7Q2KHR2 1363 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 CDHR2Q9BYE9 1310 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 A0A0G2JLW4 131 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 STX6O43752 255 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 CTSWP56202 376 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 TOB2Q14106 344 aaPredicted RBP23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 ZSCAN31Q96LW9 406 aaPredicted RBP23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 HMG20BQ9P0W2 317 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 SRP68Q9UHB9 627 aaKnown RBP23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 ZSCAN23Q3MJ62 389 aa23.5■■□□□ 1.35
POLR2J3-203ENST00000464525 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms