RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 MKL2Q9ULH7 1088 aa7.33□□□□□ -1.24
CLK1-208ENST00000464454 LOC102724428A0A0B4J2F2 783 aa7.32□□□□□ -1.24
CLK1-208ENST00000464454 EIF2AK2P19525 551 aaKnown RBP7.32□□□□□ -1.24
CLK1-208ENST00000464454 CES1P23141 567 aa7.32□□□□□ -1.24
CLK1-208ENST00000464454 DGKGP49619 791 aa7.32□□□□□ -1.24
CLK1-208ENST00000464454 SIK1P57059 783 aa7.32□□□□□ -1.24
CLK1-208ENST00000464454 RASSF7Q02833 373 aa7.32□□□□□ -1.24
CLK1-208ENST00000464454 ZSCAN29Q8IWY8 852 aaPredicted RBP7.32□□□□□ -1.24
CLK1-208ENST00000464454 BEND7Q8N7W2 519 aaPredicted RBP7.32□□□□□ -1.24
CLK1-208ENST00000464454 NSUN5Q96P11 429 aaKnown RBP7.32□□□□□ -1.24
CLK1-208ENST00000464454 PRDM6Q9NQX0 595 aa7.32□□□□□ -1.24
CLK1-208ENST00000464454 ZBTB42B2RXF5 422 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 M0R082 166 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 KIF4AO95239 1232 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 CPB1P15086 417 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 MLLT1Q03111 559 aaPredicted RBP7.31□□□□□ -1.24
CLK1-208ENST00000464454 PSAPL1Q6NUJ1 521 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 ELMSAN1Q6PJG2 1045 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 NCAPG2Q86XI2 1143 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 ZNF417Q8TAU3 575 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 ALKBH8Q96BT7 664 aaKnown RBP7.31□□□□□ -1.24
CLK1-208ENST00000464454 ZNF587Q96SQ5 575 aaPredicted RBP7.31□□□□□ -1.24
CLK1-208ENST00000464454 NAGPAQ9UK23 515 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 STARD13Q9Y3M8 1113 aa7.31□□□□□ -1.24
CLK1-208ENST00000464454 LILRB5O75023 590 aa7.3□□□□□ -1.24
CLK1-208ENST00000464454 RGS9O75916 674 aaPredicted RBP7.3□□□□□ -1.24
CLK1-208ENST00000464454 TMC7Q7Z402 723 aa7.3□□□□□ -1.24
CLK1-208ENST00000464454 MICALL1Q8N3F8 863 aa7.3□□□□□ -1.24
CLK1-208ENST00000464454 C1orf127Q8N9H9 656 aa7.3□□□□□ -1.24
CLK1-208ENST00000464454 GZF1Q9H116 711 aaPredicted RBP7.3□□□□□ -1.24
CLK1-208ENST00000464454 JPH1Q9HDC5 661 aaPredicted RBP7.3□□□□□ -1.24
CLK1-208ENST00000464454 CNTN3Q9P232 1028 aa7.3□□□□□ -1.24
CLK1-208ENST00000464454 AMOTL2Q9Y2J4 779 aa7.3□□□□□ -1.24
CLK1-208ENST00000464454 GNB5O14775 395 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 ALBP02768 609 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 EDN3P14138 238 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 GSK3AP49840 483 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 C20orf204Q6ZNR8 217 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 HFE2Q6ZVN8 426 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 TTC9Q92623 222 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 ASB16Q96NS5 453 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 LPIN3Q9BQK8 851 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 CHRDQ9H2X0 955 aa7.29□□□□□ -1.24
CLK1-208ENST00000464454 FOXD3Q9UJU5 478 aaPredicted RBP7.29□□□□□ -1.24
CLK1-208ENST00000464454 SPDYE3A6NKU9 549 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 GPR182O15218 404 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 CYP2E1P05181 493 aaPredicted RBP7.28□□□□□ -1.24
CLK1-208ENST00000464454 HOXB4P17483 251 aaPredicted RBP7.28□□□□□ -1.24
CLK1-208ENST00000464454 SNRPNP63162 240 aaKnown RBP7.28□□□□□ -1.24
CLK1-208ENST00000464454 CACTIN-AS1Q8N1I8 211 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 NUDT8Q8WV74 236 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 PLD4Q96BZ4 506 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 SMG9Q9H0W8 520 aaKnown RBP7.28□□□□□ -1.24
CLK1-208ENST00000464454 DNAJC25Q9H1X3 360 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 ZFYVE28Q9HCC9 887 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 NOP53Q9NZM5 478 aaKnown RBP7.28□□□□□ -1.24
CLK1-208ENST00000464454 KANSL3Q9P2N6 904 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 SALL4Q9UJQ4 1053 aa7.28□□□□□ -1.24
CLK1-208ENST00000464454 J3QW42 95 aa7.27□□□□□ -1.25
CLK1-208ENST00000464454 CPNE3O75131 537 aaKnown RBP7.27□□□□□ -1.25
CLK1-208ENST00000464454 SMNDC1O75940 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLK1-208ENST00000464454 IGHA2P01877 340 aa7.27□□□□□ -1.25
CLK1-208ENST00000464454 NIF3L1Q9GZT8 377 aa7.27□□□□□ -1.25
CLK1-208ENST00000464454 EREGO14944 169 aa7.26□□□□□ -1.25
CLK1-208ENST00000464454 TREHO43280 583 aa7.26□□□□□ -1.25
CLK1-208ENST00000464454 CCDC27Q2M243 656 aa7.26□□□□□ -1.25
CLK1-208ENST00000464454 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
CLK1-208ENST00000464454 LINC00114Q6XXX2 140 aa7.26□□□□□ -1.25
CLK1-208ENST00000464454 CCDC9Q9Y3X0 531 aaKnown RBP7.26□□□□□ -1.25
CLK1-208ENST00000464454 CNTNAP5Q8WYK1 1306 aa7.26□□□□□ -1.25
CLK1-208ENST00000464454 FAM177BA6PVY3 158 aa7.25□□□□□ -1.25
CLK1-208ENST00000464454 AFF1P51825 1210 aaKnown RBP7.25□□□□□ -1.25
CLK1-208ENST00000464454 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
CLK1-208ENST00000464454 ALYREFQ86V81 257 aaKnown RBP7.25□□□□□ -1.25
CLK1-208ENST00000464454 CEP120Q8N960 986 aa7.25□□□□□ -1.25
CLK1-208ENST00000464454 CSRNP1Q96S65 589 aa7.25□□□□□ -1.25
CLK1-208ENST00000464454 PBX4Q9BYU1 374 aa7.25□□□□□ -1.25
CLK1-208ENST00000464454 EIF1AYO14602 144 aaKnown RBP7.24□□□□□ -1.25
CLK1-208ENST00000464454 NID1P14543 1247 aa7.24□□□□□ -1.25
CLK1-208ENST00000464454 ORC1Q13415 861 aa7.24□□□□□ -1.25
CLK1-208ENST00000464454 TMCO4Q5TGY1 634 aa7.24□□□□□ -1.25
CLK1-208ENST00000464454 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
CLK1-208ENST00000464454 GALNT12Q8IXK2 581 aa7.24□□□□□ -1.25
CLK1-208ENST00000464454 ERCC3P19447 782 aa7.23□□□□□ -1.25
CLK1-208ENST00000464454 ATP11AP98196 1134 aa7.23□□□□□ -1.25
CLK1-208ENST00000464454 DSC3Q14574 896 aa7.23□□□□□ -1.25
CLK1-208ENST00000464454 CEP135Q66GS9 1140 aa7.23□□□□□ -1.25
CLK1-208ENST00000464454 RASSF4Q9H2L5 321 aa7.23□□□□□ -1.25
CLK1-208ENST00000464454 FMR1Q06787 632 aaKnown RBP eCLIP7.22□□□□□ -1.25
CLK1-208ENST00000464454 COL9A3Q14050 684 aaPredicted RBP7.22□□□□□ -1.25
CLK1-208ENST00000464454 COL19A1Q14993 1142 aa7.22□□□□□ -1.25
CLK1-208ENST00000464454 PRRT3Q5FWE3 981 aa7.22□□□□□ -1.25
CLK1-208ENST00000464454 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
CLK1-208ENST00000464454 WFDC8Q8IUA0 241 aa7.22□□□□□ -1.25
CLK1-208ENST00000464454 TMEM102Q8N9M5 508 aaPredicted RBP7.22□□□□□ -1.25
CLK1-208ENST00000464454 TRIM11Q96F44 468 aa7.22□□□□□ -1.25
CLK1-208ENST00000464454 OSMRQ99650 979 aa7.22□□□□□ -1.25
CLK1-208ENST00000464454 PLVAPQ9BX97 442 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms