RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
CTDSP1-206ENST00000464255 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
CTDSP1-206ENST00000464255 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
CTDSP1-206ENST00000464255 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
CTDSP1-206ENST00000464255 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 F6X3S4 739 aa16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 PSMD14O00487 310 aa16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 PGAP2Q9UHJ9 254 aa16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 ZBTB12Q9Y330 459 aaPredicted RBP16.73■□□□□ 0.27
CTDSP1-206ENST00000464255 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 ECE2O60344 883 aa16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 CSF1RP07333 972 aa16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 ANKRD18AQ8IVF6 992 aa16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 BSDC1Q9NW68 430 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 CNOT7Q9UIV1 285 aaKnown RBP16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 MINPP1Q9UNW1 487 aa16.72■□□□□ 0.27
CTDSP1-206ENST00000464255 UFL1O94874 794 aa16.71■□□□□ 0.27
CTDSP1-206ENST00000464255 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
CTDSP1-206ENST00000464255 EYA3Q99504 573 aa16.71■□□□□ 0.27
CTDSP1-206ENST00000464255 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
CTDSP1-206ENST00000464255 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
CTDSP1-206ENST00000464255 SCN9AQ15858 1988 aa16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 CNTNAP1P78357 1384 aa16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 TRAF5O00463 557 aa16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 CST9Q5W186 159 aa16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 DPF2Q92785 391 aa16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 XDHP47989 1333 aa16.7■□□□□ 0.26
CTDSP1-206ENST00000464255 EGFRP00533 1210 aa16.69■□□□□ 0.26
CTDSP1-206ENST00000464255 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-206ENST00000464255 FOXO4P98177 505 aa16.69■□□□□ 0.26
CTDSP1-206ENST00000464255 MICALL2Q8IY33 904 aa16.69■□□□□ 0.26
CTDSP1-206ENST00000464255 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-206ENST00000464255 BCL2L13Q9BXK5 485 aa16.69■□□□□ 0.26
CTDSP1-206ENST00000464255 VEGFBP49765 207 aa16.68■□□□□ 0.26
CTDSP1-206ENST00000464255 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
CTDSP1-206ENST00000464255 MYH3P11055 1940 aa16.68■□□□□ 0.26
CTDSP1-206ENST00000464255 RASSF10A6NK89 507 aa16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 ITGA6P23229 1130 aa16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 SLFN5Q08AF3 891 aa16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-206ENST00000464255 RPS12P25398 132 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 TXNRD3Q86VQ6 643 aa16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 TRMT2AQ8IZ69 625 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 GMLQ99445 158 aa16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 GLIS2Q9BZE0 524 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-206ENST00000464255 E9PSI1 815 aa16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 H7C1D1 291 aa16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 HSPA1AP0DMV8 641 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 HSPA1BP0DMV9 641 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 COL13A1Q5TAT6 717 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 DLK2Q6UY11 383 aa16.65■□□□□ 0.26
CTDSP1-206ENST00000464255 KLRK1P26718 216 aa16.64■□□□□ 0.25
CTDSP1-206ENST00000464255 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
CTDSP1-206ENST00000464255 TBC1D10BQ4KMP7 808 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-206ENST00000464255 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
CTDSP1-206ENST00000464255 ZNF609O15014 1411 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 GRM8O00222 908 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 ALDH1L1O75891 902 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 IGHMBP2P38935 993 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 ZNF280AP59817 542 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 RSBN1LQ6PCB5 846 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 SSH1Q8WYL5 1049 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 IRS2Q9Y4H2 1338 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 MED23Q9ULK4 1368 aa16.63■□□□□ 0.25
CTDSP1-206ENST00000464255 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
CTDSP1-206ENST00000464255 SNAP23O00161 211 aa16.62■□□□□ 0.25
CTDSP1-206ENST00000464255 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
CTDSP1-206ENST00000464255 LEMD3Q9Y2U8 911 aa16.62■□□□□ 0.25
CTDSP1-206ENST00000464255 ASTN2O75129 1339 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-206ENST00000464255 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 CHRNDQ07001 517 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 CDC37L1Q7L3B6 337 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 MXD3Q9BW11 206 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 UTYO14607 1347 aa16.61■□□□□ 0.25
CTDSP1-206ENST00000464255 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
CTDSP1-206ENST00000464255 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
CTDSP1-206ENST00000464255 G3V3G9 751 aa16.6■□□□□ 0.25
CTDSP1-206ENST00000464255 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-206ENST00000464255 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-206ENST00000464255 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms