RNA–Protein interactions for RNA: ENST00000464117.1

SHISA4-202, Transcript of shisa family member 4, humanhuman

TSL 2

Gene SHISA4, Length 914 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-202ENST00000464117 TTLL11Q8NHH1 800 aa25.49■■□□□ 1.67
SHISA4-202ENST00000464117 CNOT7Q9UIV1 285 aaKnown RBP25.49■■□□□ 1.67
SHISA4-202ENST00000464117 RTL9Q8NET4 1388 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 RASSF10A6NK89 507 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 H7C1D1 291 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 H7C1W4 665 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 PSMD14O00487 310 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 UFL1O94874 794 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 ZC3H15Q8WU90 426 aaKnown RBP25.48■■□□□ 1.67
SHISA4-202ENST00000464117 DNAAF4Q8WXU2 420 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 MYH16Q9H6N6 1097 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 PGAP2Q9UHJ9 254 aa25.48■■□□□ 1.67
SHISA4-202ENST00000464117 MYH3P11055 1940 aa25.47■■□□□ 1.67
SHISA4-202ENST00000464117 XDHP47989 1333 aa25.47■■□□□ 1.67
SHISA4-202ENST00000464117 RPS12P25398 132 aaKnown RBP25.47■■□□□ 1.67
SHISA4-202ENST00000464117 DOK7Q18PE1 504 aa25.47■■□□□ 1.67
SHISA4-202ENST00000464117 VEGFBP49765 207 aa25.46■■□□□ 1.67
SHISA4-202ENST00000464117 GCKRQ14397 625 aa25.46■■□□□ 1.67
SHISA4-202ENST00000464117 UBE3BQ7Z3V4 1068 aa25.46■■□□□ 1.67
SHISA4-202ENST00000464117 LINS1Q8NG48 757 aa25.46■■□□□ 1.67
SHISA4-202ENST00000464117 GPR101Q96P66 508 aaPredicted RBP25.46■■□□□ 1.67
SHISA4-202ENST00000464117 DEFB115Q30KQ5 88 aa25.45■■□□□ 1.66
SHISA4-202ENST00000464117 MICALL2Q8IY33 904 aa25.45■■□□□ 1.66
SHISA4-202ENST00000464117 PLA2G12BQ9BX93 195 aa25.45■■□□□ 1.66
SHISA4-202ENST00000464117 GREM2Q9H772 168 aa25.45■■□□□ 1.66
SHISA4-202ENST00000464117 SPINK5Q9NQ38 1064 aaPredicted RBP25.45■■□□□ 1.66
SHISA4-202ENST00000464117 ABT1Q9ULW3 272 aaKnown RBP25.45■■□□□ 1.66
SHISA4-202ENST00000464117 ZBTB12Q9Y330 459 aaPredicted RBP25.45■■□□□ 1.66
SHISA4-202ENST00000464117 G3V3G9 751 aa25.44■■□□□ 1.66
SHISA4-202ENST00000464117 ATP2B4P23634 1241 aa25.44■■□□□ 1.66
SHISA4-202ENST00000464117 HIRAP54198 1017 aaPredicted RBP25.44■■□□□ 1.66
SHISA4-202ENST00000464117 DCAF8Q5TAQ9 597 aa25.44■■□□□ 1.66
SHISA4-202ENST00000464117 TRPM4Q8TD43 1214 aa25.44■■□□□ 1.66
SHISA4-202ENST00000464117 BSDC1Q9NW68 430 aaPredicted RBP25.44■■□□□ 1.66
SHISA4-202ENST00000464117 TRPM7Q96QT4 1865 aa25.43■■□□□ 1.66
SHISA4-202ENST00000464117 TRAF5O00463 557 aa25.43■■□□□ 1.66
SHISA4-202ENST00000464117 COL13A1Q5TAT6 717 aaPredicted RBP25.43■■□□□ 1.66
SHISA4-202ENST00000464117 FMR1Q06787 632 aaKnown RBP eCLIP25.42■■□□□ 1.66
SHISA4-202ENST00000464117 KCNQ5Q9NR82 932 aa25.42■■□□□ 1.66
SHISA4-202ENST00000464117 SHTN1A0MZ66 631 aa25.41■■□□□ 1.66
SHISA4-202ENST00000464117 VIL1P09327 827 aaKnown RBP25.41■■□□□ 1.66
SHISA4-202ENST00000464117 CASP7P55210 303 aa25.41■■□□□ 1.66
SHISA4-202ENST00000464117 CST9Q5W186 159 aa25.41■■□□□ 1.66
SHISA4-202ENST00000464117 CDC37L1Q7L3B6 337 aa25.4■■□□□ 1.66
SHISA4-202ENST00000464117 GLIS2Q9BZE0 524 aaPredicted RBP25.4■■□□□ 1.66
SHISA4-202ENST00000464117 MINPP1Q9UNW1 487 aa25.4■■□□□ 1.66
SHISA4-202ENST00000464117 SCN9AQ15858 1988 aa25.4■■□□□ 1.66
SHISA4-202ENST00000464117 IGHMBP2P38935 993 aaKnown RBP25.39■■□□□ 1.66
SHISA4-202ENST00000464117 WDR33Q9C0J8 1336 aaKnown RBP25.38■■□□□ 1.65
SHISA4-202ENST00000464117 CSF1RP07333 972 aa25.38■■□□□ 1.65
SHISA4-202ENST00000464117 SAMD7Q7Z3H4 446 aa25.38■■□□□ 1.65
SHISA4-202ENST00000464117 TLL2Q9Y6L7 1015 aa25.38■■□□□ 1.65
SHISA4-202ENST00000464117 ZNF521Q96K83 1311 aa25.37■■□□□ 1.65
SHISA4-202ENST00000464117 ZNF609O15014 1411 aa25.37■■□□□ 1.65
SHISA4-202ENST00000464117 MED23Q9ULK4 1368 aa25.37■■□□□ 1.65
SHISA4-202ENST00000464117 ITGA6P23229 1130 aa25.37■■□□□ 1.65
SHISA4-202ENST00000464117 PODNQ7Z5L7 613 aa25.37■■□□□ 1.65
SHISA4-202ENST00000464117 CELF2O95319 508 aaKnown RBP25.36■■□□□ 1.65
SHISA4-202ENST00000464117 ECE1P42892 770 aa25.36■■□□□ 1.65
SHISA4-202ENST00000464117 TBC1D10BQ4KMP7 808 aaPredicted RBP25.36■■□□□ 1.65
SHISA4-202ENST00000464117 BEND3Q5T5X7 828 aa25.36■■□□□ 1.65
SHISA4-202ENST00000464117 AGBL3Q8NEM8 1001 aa25.36■■□□□ 1.65
SHISA4-202ENST00000464117 AIDAQ96BJ3 306 aa25.36■■□□□ 1.65
SHISA4-202ENST00000464117 SPEF2Q9C093 1822 aa25.35■■□□□ 1.65
SHISA4-202ENST00000464117 F6X3S4 739 aa25.35■■□□□ 1.65
SHISA4-202ENST00000464117 CCT4P50991 539 aaKnown RBP25.35■■□□□ 1.65
SHISA4-202ENST00000464117 FAM161AQ3B820 660 aa25.35■■□□□ 1.65
SHISA4-202ENST00000464117 RSBN1LQ6PCB5 846 aaPredicted RBP25.35■■□□□ 1.65
SHISA4-202ENST00000464117 WBP1LQ9NX94 342 aa25.35■■□□□ 1.65
SHISA4-202ENST00000464117 CAPNS2Q96L46 248 aa25.34■■□□□ 1.65
SHISA4-202ENST00000464117 MPHOSPH8Q99549 860 aa25.34■■□□□ 1.65
SHISA4-202ENST00000464117 ANKRD2Q9GZV1 360 aa25.34■■□□□ 1.65
SHISA4-202ENST00000464117 LEMD3Q9Y2U8 911 aa25.34■■□□□ 1.65
SHISA4-202ENST00000464117 PSME4Q14997 1843 aa25.34■■□□□ 1.65
SHISA4-202ENST00000464117 FOXN1O15353 648 aa25.33■■□□□ 1.65
SHISA4-202ENST00000464117 EGFRP00533 1210 aa25.33■■□□□ 1.65
SHISA4-202ENST00000464117 MAP2K1Q02750 393 aaPredicted RBP25.33■■□□□ 1.65
SHISA4-202ENST00000464117 PAXIP1Q6ZW49 1069 aaPredicted RBP25.33■■□□□ 1.65
SHISA4-202ENST00000464117 SAPCD2Q86UD0 394 aa25.33■■□□□ 1.65
SHISA4-202ENST00000464117 TNS4Q8IZW8 715 aa25.33■■□□□ 1.65
SHISA4-202ENST00000464117 USP17L3A6NCW0 530 aa25.32■■□□□ 1.64
SHISA4-202ENST00000464117 USP17L4A6NCW7 530 aa25.32■■□□□ 1.64
SHISA4-202ENST00000464117 ZNF280AP59817 542 aaPredicted RBP25.32■■□□□ 1.64
SHISA4-202ENST00000464117 KIF4BQ2VIQ3 1234 aa25.32■■□□□ 1.64
SHISA4-202ENST00000464117 RBM26Q5T8P6 1007 aaKnown RBP25.32■■□□□ 1.64
SHISA4-202ENST00000464117 USP17L1Q7RTZ2 530 aa25.32■■□□□ 1.64
SHISA4-202ENST00000464117 USP48Q86UV5 1035 aa25.32■■□□□ 1.64
SHISA4-202ENST00000464117 DCPSQ96C86 337 aaKnown RBP25.32■■□□□ 1.64
SHISA4-202ENST00000464117 HHIPL1Q96JK4 782 aa25.32■■□□□ 1.64
SHISA4-202ENST00000464117 ANKRD18BA2A2Z9 1011 aa25.31■■□□□ 1.64
SHISA4-202ENST00000464117 WTIPA6NIX2 430 aaPredicted RBP25.31■■□□□ 1.64
SHISA4-202ENST00000464117 CTCFP49711 727 aaPredicted RBP25.31■■□□□ 1.64
SHISA4-202ENST00000464117 KRT26Q7Z3Y9 468 aa25.31■■□□□ 1.64
SHISA4-202ENST00000464117 THSD7BQ9C0I4 1608 aa25.3■■□□□ 1.64
SHISA4-202ENST00000464117 FOXO4P98177 505 aa25.3■■□□□ 1.64
SHISA4-202ENST00000464117 CYP4F22Q6NT55 531 aa25.3■■□□□ 1.64
SHISA4-202ENST00000464117 GMLQ99445 158 aa25.3■■□□□ 1.64
SHISA4-202ENST00000464117 COA1Q9GZY4 146 aa25.3■■□□□ 1.64
SHISA4-202ENST00000464117 ZNF408Q9H9D4 720 aa25.3■■□□□ 1.64
SHISA4-202ENST00000464117 GRM8O00222 908 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms