RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ABCC1P33527 1531 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 POGZQ7Z3K3 1410 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
CD46-211ENST00000464082 PLAURQ03405 335 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 MSL1Q68DK7 614 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 BTLAQ7Z6A9 289 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 GSX2Q9BZM3 304 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 KIAA1024Q9UPX6 916 aa8.65□□□□□ -1.02
CD46-211ENST00000464082 MADDQ8WXG6 1647 aa8.65□□□□□ -1.03
CD46-211ENST00000464082 SAMD9LQ8IVG5 1584 aa8.65□□□□□ -1.03
CD46-211ENST00000464082 ARHGEF12Q9NZN5 1544 aa8.64□□□□□ -1.03
CD46-211ENST00000464082 YEATS2Q9ULM3 1422 aa8.64□□□□□ -1.03
CD46-211ENST00000464082 GRIK5Q16478 980 aa8.64□□□□□ -1.03
CD46-211ENST00000464082 FMNL2Q96PY5 1086 aa8.64□□□□□ -1.03
CD46-211ENST00000464082 ARHGAP5Q13017 1502 aa8.64□□□□□ -1.03
CD46-211ENST00000464082 ZFYVE16Q7Z3T8 1539 aa8.64□□□□□ -1.03
CD46-211ENST00000464082 KIDINS220Q9ULH0 1771 aa8.63□□□□□ -1.03
CD46-211ENST00000464082 ABCA6Q8N139 1617 aa8.63□□□□□ -1.03
CD46-211ENST00000464082 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
CD46-211ENST00000464082 COBLO75128 1261 aa8.63□□□□□ -1.03
CD46-211ENST00000464082 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
CD46-211ENST00000464082 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.63□□□□□ -1.03
CD46-211ENST00000464082 FER1L4A9Z1Z3 1794 aa8.63□□□□□ -1.03
CD46-211ENST00000464082 SCAPERQ9BY12 1400 aa8.63□□□□□ -1.03
CD46-211ENST00000464082 RIMS1Q86UR5 1692 aaKnown RBP8.62□□□□□ -1.03
CD46-211ENST00000464082 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 HECW2Q9P2P5 1572 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 DIP2CQ9Y2E4 1556 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 LZTS3O60299 673 aaPredicted RBP8.62□□□□□ -1.03
CD46-211ENST00000464082 CPB1P15086 417 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 NFKB1P19838 968 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 TXKP42681 527 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 MAGI2Q86UL8 1455 aa8.62□□□□□ -1.03
CD46-211ENST00000464082 GPATCH8Q9UKJ3 1502 aaKnown RBP8.61□□□□□ -1.03
CD46-211ENST00000464082 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
CD46-211ENST00000464082 FSTP19883 344 aa8.61□□□□□ -1.03
CD46-211ENST00000464082 IGF2-ASQ6U949 168 aa8.61□□□□□ -1.03
CD46-211ENST00000464082 DTWD1Q8N5C7 304 aa8.61□□□□□ -1.03
CD46-211ENST00000464082 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
CD46-211ENST00000464082 KRTAP4-7Q9BYR0 210 aa8.61□□□□□ -1.03
CD46-211ENST00000464082 CDK11AQ9UQ88 783 aaPredicted RBP8.61□□□□□ -1.03
CD46-211ENST00000464082 EHBP1L1Q8N3D4 1523 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 DEAF1O75398 565 aaPredicted RBP8.6□□□□□ -1.03
CD46-211ENST00000464082 CD97P48960 835 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 PNMA5Q96PV4 448 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 ALG2Q9H553 416 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 CHMP3Q9Y3E7 222 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 REREQ9P2R6 1566 aa8.6□□□□□ -1.03
CD46-211ENST00000464082 ZNF518AQ6AHZ1 1483 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 ZBTB42B2RXF5 422 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 C21orf2O43822 256 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 ALX3O95076 343 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 MED26O95402 600 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 CLDN10P78369 228 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 CCINQ13939 588 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 PERM1Q5SV97 790 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 LCE1DQ5T752 114 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 CCDC102BQ68D86 513 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 TRAPPC8Q9Y2L5 1435 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 SYCP2Q9BX26 1530 aa8.59□□□□□ -1.03
CD46-211ENST00000464082 PTPRMP28827 1452 aa8.58□□□□□ -1.04
CD46-211ENST00000464082 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
CD46-211ENST00000464082 INO80Q9ULG1 1556 aaPredicted RBP8.58□□□□□ -1.04
CD46-211ENST00000464082 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
CD46-211ENST00000464082 EFCAB2Q5VUJ9 269 aa8.58□□□□□ -1.04
CD46-211ENST00000464082 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
CD46-211ENST00000464082 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
CD46-211ENST00000464082 VPS8Q8N3P4 1428 aa8.57□□□□□ -1.04
CD46-211ENST00000464082 PPP1R12BO60237 982 aaPredicted RBP8.57□□□□□ -1.04
CD46-211ENST00000464082 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
CD46-211ENST00000464082 IRAK1P51617 712 aa8.57□□□□□ -1.04
CD46-211ENST00000464082 WFDC8Q8IUA0 241 aa8.57□□□□□ -1.04
CD46-211ENST00000464082 TSEN2Q8NCE0 465 aaKnown RBP8.57□□□□□ -1.04
CD46-211ENST00000464082 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
CD46-211ENST00000464082 ATP10AO60312 1499 aa8.57□□□□□ -1.04
CD46-211ENST00000464082 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
CD46-211ENST00000464082 DLL1O00548 723 aa8.56□□□□□ -1.04
CD46-211ENST00000464082 TAL1P17542 331 aaPredicted RBP8.56□□□□□ -1.04
CD46-211ENST00000464082 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
CD46-211ENST00000464082 FRRS1LQ9P0K9 344 aa8.56□□□□□ -1.04
CD46-211ENST00000464082 ZFATQ9P243 1243 aa8.56□□□□□ -1.04
CD46-211ENST00000464082 C9orf84Q5VXU9 1444 aa8.55□□□□□ -1.04
CD46-211ENST00000464082 MLLT1Q03111 559 aaPredicted RBP8.55□□□□□ -1.04
CD46-211ENST00000464082 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
CD46-211ENST00000464082 AFAP1Q8N556 730 aa8.55□□□□□ -1.04
CD46-211ENST00000464082 AKTIPQ9H8T0 292 aa8.55□□□□□ -1.04
CD46-211ENST00000464082 PLXNC1O60486 1568 aa8.55□□□□□ -1.04
CD46-211ENST00000464082 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
CD46-211ENST00000464082 SETD1BQ9UPS6 1966 aaKnown RBP8.54□□□□□ -1.04
CD46-211ENST00000464082 C3P01024 1663 aa8.54□□□□□ -1.04
CD46-211ENST00000464082 NCOA2Q15596 1464 aa8.54□□□□□ -1.04
CD46-211ENST00000464082 MBD5Q9P267 1494 aa8.54□□□□□ -1.04
CD46-211ENST00000464082 ELMSAN1Q6PJG2 1045 aa8.54□□□□□ -1.04
CD46-211ENST00000464082 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
CD46-211ENST00000464082 BCS1LQ9Y276 419 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms