RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 SLC51AQ86UW1 340 aa9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 EYA3Q99504 573 aa9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 GREM2Q9H772 168 aa9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 SMC4Q9NTJ3 1288 aa9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 BSDC1Q9NW68 430 aaPredicted RBP9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
THUMPD3-208ENST00000464045 UTYO14607 1347 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 GPSM2P81274 684 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 HNRNPUQ00839 825 aaKnown RBP eCLIP9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 WASHC4Q2M389 1173 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 SLC4A10Q6U841 1118 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 C9orf78Q9NZ63 289 aaPredicted RBP9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 ZNRF3Q9ULT6 936 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 CLEC11AQ9Y240 323 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 DUOX1Q9NRD9 1551 aa9.4□□□□□ -0.9
THUMPD3-208ENST00000464045 COL4A5P29400 1685 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 XDHP47989 1333 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 ZBED9Q6R2W3 1325 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 KIF16BQ96L93 1317 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 ITGA6P23229 1130 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 ATP2B4P23634 1241 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 IGHMBP2P38935 993 aaKnown RBP9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 FOXO4P98177 505 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 TBC1D16Q8TBP0 767 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 CCDC85AQ96PX6 553 aaPredicted RBP9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 POLLQ9UGP5 575 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 HACL1Q9UJ83 578 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 GGA1Q9UJY5 639 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 LTBP1Q14766 1721 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 COL4A1P02462 1669 aa9.39□□□□□ -0.91
THUMPD3-208ENST00000464045 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 IFIT5Q13325 482 aaKnown RBP9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 TNIP1Q15025 636 aa9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 PNMA8AQ86V59 439 aaPredicted RBP9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 MPHOSPH8Q99549 860 aa9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 API5Q9BZZ5 524 aaKnown RBP9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 TAF1DQ9H5J8 278 aaPredicted RBP9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
THUMPD3-208ENST00000464045 MYH3P11055 1940 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 UFL1O94874 794 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 EPHX2P34913 555 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 CXCL9Q07325 125 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 ZC3H12CQ9C0D7 883 aaKnown RBP9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 ANKRD2Q9GZV1 360 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 NOB1Q9ULX3 412 aaKnown RBP9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 SCN4AP35499 1836 aa9.37□□□□□ -0.91
THUMPD3-208ENST00000464045 TAF1P21675 1872 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 FOXN1O15353 648 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 IPO8O15397 1037 aaKnown RBP9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 NBPF7P0C2Y1 421 aaPredicted RBP9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 SCNN1DP51172 638 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 GRM1Q13255 1194 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 RABL6Q3YEC7 729 aaPredicted RBP9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 LMBR1LQ6UX01 489 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 HDAC5Q9UQL6 1122 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 MED23Q9ULK4 1368 aa9.36□□□□□ -0.91
THUMPD3-208ENST00000464045 YDJCA8MPS7 323 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 ZNF609O15014 1411 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 ECE2O60344 883 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 RPS12P25398 132 aaKnown RBP9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 VEGFBP49765 207 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 FMR1Q06787 632 aaKnown RBP eCLIP9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 USP50Q70EL3 339 aaPredicted RBP9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 DPF2Q92785 391 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 KAZALD1Q96I82 304 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 SUCLG2Q96I99 432 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 USP44Q9H0E7 712 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 CHMP3Q9Y3E7 222 aa9.35□□□□□ -0.91
THUMPD3-208ENST00000464045 G3V3G9 751 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 RAD17O75943 681 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 CHRNDQ07001 517 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 TAF7LQ5H9L4 462 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 LDHAL6AQ6ZMR3 332 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 PODNQ7Z5L7 613 aa9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 BICC1Q9H694 974 aaKnown RBP9.34□□□□□ -0.91
THUMPD3-208ENST00000464045 DBNDD1Q9H9R9 158 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms