RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HNRNPUQ00839 825 aaKnown RBP eCLIP16.45■□□□□ 0.22
XRN1-203ENST00000463916 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 BSDC1Q9NW68 430 aaPredicted RBP16.45■□□□□ 0.22
XRN1-203ENST00000463916 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 MINPP1Q9UNW1 487 aa16.45■□□□□ 0.22
XRN1-203ENST00000463916 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
XRN1-203ENST00000463916 DBNDD1Q9H9R9 158 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 KCNQ5Q9NR82 932 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 C9orf78Q9NZ63 289 aaPredicted RBP16.44■□□□□ 0.22
XRN1-203ENST00000463916 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 UFL1O94874 794 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 EPHX2P34913 555 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 HTRA3P83110 453 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 DOK7Q18PE1 504 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 KAZALD1Q96I82 304 aa16.44■□□□□ 0.22
XRN1-203ENST00000463916 EPS15P42566 896 aa16.43■□□□□ 0.22
XRN1-203ENST00000463916 GGA1Q9UJY5 639 aa16.43■□□□□ 0.22
XRN1-203ENST00000463916 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
XRN1-203ENST00000463916 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
XRN1-203ENST00000463916 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
XRN1-203ENST00000463916 XDHP47989 1333 aa16.42■□□□□ 0.22
XRN1-203ENST00000463916 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
XRN1-203ENST00000463916 CIAPIN1Q6FI81 312 aa16.42■□□□□ 0.22
XRN1-203ENST00000463916 ZC3H12CQ9C0D7 883 aaKnown RBP16.42■□□□□ 0.22
XRN1-203ENST00000463916 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 EYA3Q99504 573 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 NOB1Q9ULX3 412 aaKnown RBP16.41■□□□□ 0.22
XRN1-203ENST00000463916 UTYO14607 1347 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 ECE2O60344 883 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 IGHMBP2P38935 993 aaKnown RBP16.41■□□□□ 0.22
XRN1-203ENST00000463916 GMPSP49915 693 aaPredicted RBP16.41■□□□□ 0.22
XRN1-203ENST00000463916 APLP1P51693 650 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 CHMP3Q9Y3E7 222 aa16.41■□□□□ 0.22
XRN1-203ENST00000463916 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
XRN1-203ENST00000463916 USP44Q9H0E7 712 aa16.4■□□□□ 0.22
XRN1-203ENST00000463916 GPRC5DQ9NZD1 345 aa16.4■□□□□ 0.22
XRN1-203ENST00000463916 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
XRN1-203ENST00000463916 ANKRD18BA2A2Z9 1011 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 BRPF1P55201 1214 aaPredicted RBP16.39■□□□□ 0.21
XRN1-203ENST00000463916 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
XRN1-203ENST00000463916 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
XRN1-203ENST00000463916 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 ADAMTSL1Q8N6G6 1762 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 SHTN1A0MZ66 631 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 PSMD14O00487 310 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 ATP2B4P23634 1241 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 LMOD1P29536 600 aaPredicted RBP16.39■□□□□ 0.21
XRN1-203ENST00000463916 CCT4P50991 539 aaKnown RBP16.39■□□□□ 0.21
XRN1-203ENST00000463916 TNIP1Q15025 636 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 DNAJC5GQ8N7S2 189 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 SCN9AQ15858 1988 aa16.39■□□□□ 0.21
XRN1-203ENST00000463916 SNAP23O00161 211 aa16.38■□□□□ 0.21
XRN1-203ENST00000463916 PNMA8AQ86V59 439 aaPredicted RBP16.38■□□□□ 0.21
XRN1-203ENST00000463916 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
XRN1-203ENST00000463916 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
XRN1-203ENST00000463916 CHRNDQ07001 517 aa16.38■□□□□ 0.21
XRN1-203ENST00000463916 MAP1SQ66K74 1059 aaPredicted RBP16.38■□□□□ 0.21
XRN1-203ENST00000463916 BICC1Q9H694 974 aaKnown RBP16.38■□□□□ 0.21
XRN1-203ENST00000463916 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
XRN1-203ENST00000463916 KLRK1P26718 216 aa16.37■□□□□ 0.21
XRN1-203ENST00000463916 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
XRN1-203ENST00000463916 TAF5LO75529 589 aa16.36■□□□□ 0.21
XRN1-203ENST00000463916 BCAR3O75815 825 aa16.36■□□□□ 0.21
XRN1-203ENST00000463916 CCDC57Q2TAC2 916 aa16.36■□□□□ 0.21
XRN1-203ENST00000463916 ANKRD44Q8N8A2 993 aa16.36■□□□□ 0.21
XRN1-203ENST00000463916 CNOT7Q9UIV1 285 aaKnown RBP16.36■□□□□ 0.21
XRN1-203ENST00000463916 G3V3G9 751 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
XRN1-203ENST00000463916 RABL6Q3YEC7 729 aaPredicted RBP16.35■□□□□ 0.21
XRN1-203ENST00000463916 DCAF8Q5TAQ9 597 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 USP50Q70EL3 339 aaPredicted RBP16.35■□□□□ 0.21
XRN1-203ENST00000463916 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
XRN1-203ENST00000463916 LEMD3Q9Y2U8 911 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 PASKQ96RG2 1323 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 MED23Q9ULK4 1368 aa16.35■□□□□ 0.21
XRN1-203ENST00000463916 VIL1P09327 827 aaKnown RBP16.34■□□□□ 0.21
XRN1-203ENST00000463916 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
XRN1-203ENST00000463916 CNTROBQ8N137 903 aa16.34■□□□□ 0.21
XRN1-203ENST00000463916 MICALL2Q8IY33 904 aa16.34■□□□□ 0.21
XRN1-203ENST00000463916 TRPM4Q8TD43 1214 aa16.34■□□□□ 0.21
XRN1-203ENST00000463916 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
XRN1-203ENST00000463916 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
XRN1-203ENST00000463916 EGFRP00533 1210 aa16.33■□□□□ 0.21
XRN1-203ENST00000463916 DPF2Q92785 391 aa16.33■□□□□ 0.21
XRN1-203ENST00000463916 API5Q9BZZ5 524 aaKnown RBP16.33■□□□□ 0.21
XRN1-203ENST00000463916 ZBED9Q6R2W3 1325 aa16.33■□□□□ 0.2
XRN1-203ENST00000463916 FMR1Q06787 632 aaKnown RBP eCLIP16.33■□□□□ 0.2
XRN1-203ENST00000463916 TAF7LQ5H9L4 462 aa16.33■□□□□ 0.2
XRN1-203ENST00000463916 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
XRN1-203ENST00000463916 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
XRN1-203ENST00000463916 IRS2Q9Y4H2 1338 aa16.33■□□□□ 0.2
XRN1-203ENST00000463916 ARHGAP45Q92619 1136 aa16.32■□□□□ 0.2
XRN1-203ENST00000463916 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
XRN1-203ENST00000463916 A0A1B0GUL6 1792 aa16.32■□□□□ 0.2
XRN1-203ENST00000463916 PLIN1O60240 522 aa16.31■□□□□ 0.2
XRN1-203ENST00000463916 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
XRN1-203ENST00000463916 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms