RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ZBTB12Q9Y330 459 aaPredicted RBP24.14■■□□□ 1.45
SF3A1-205ENST00000463818 ECE2O60344 883 aa24.13■■□□□ 1.45
SF3A1-205ENST00000463818 UFL1O94874 794 aa24.13■■□□□ 1.45
SF3A1-205ENST00000463818 HIRAP54198 1017 aaPredicted RBP24.13■■□□□ 1.45
SF3A1-205ENST00000463818 CTSWP56202 376 aa24.13■■□□□ 1.45
SF3A1-205ENST00000463818 DEFB115Q30KQ5 88 aa24.13■■□□□ 1.45
SF3A1-205ENST00000463818 TTLL11Q8NHH1 800 aa24.13■■□□□ 1.45
SF3A1-205ENST00000463818 SPINK5Q9NQ38 1064 aaPredicted RBP24.13■■□□□ 1.45
SF3A1-205ENST00000463818 GGA1Q9UJY5 639 aa24.13■■□□□ 1.45
SF3A1-205ENST00000463818 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
SF3A1-205ENST00000463818 H7C1D1 291 aa24.12■■□□□ 1.45
SF3A1-205ENST00000463818 TRAF5O00463 557 aa24.12■■□□□ 1.45
SF3A1-205ENST00000463818 FKBP5Q13451 457 aaPredicted RBP24.12■■□□□ 1.45
SF3A1-205ENST00000463818 DPF2Q92785 391 aa24.12■■□□□ 1.45
SF3A1-205ENST00000463818 PGAP2Q9UHJ9 254 aa24.12■■□□□ 1.45
SF3A1-205ENST00000463818 ABT1Q9ULW3 272 aaKnown RBP24.12■■□□□ 1.45
SF3A1-205ENST00000463818 RASSF10A6NK89 507 aa24.11■■□□□ 1.45
SF3A1-205ENST00000463818 MICALL2Q8IY33 904 aa24.11■■□□□ 1.45
SF3A1-205ENST00000463818 TRPM4Q8TD43 1214 aa24.11■■□□□ 1.45
SF3A1-205ENST00000463818 DNAAF4Q8WXU2 420 aa24.11■■□□□ 1.45
SF3A1-205ENST00000463818 CDC5LQ99459 802 aaKnown RBP24.11■■□□□ 1.45
SF3A1-205ENST00000463818 G3V3G9 751 aa24.1■■□□□ 1.45
SF3A1-205ENST00000463818 GCKRQ14397 625 aa24.1■■□□□ 1.45
SF3A1-205ENST00000463818 DCAF8Q5TAQ9 597 aa24.1■■□□□ 1.45
SF3A1-205ENST00000463818 UBE3BQ7Z3V4 1068 aa24.1■■□□□ 1.45
SF3A1-205ENST00000463818 ZC3H15Q8WU90 426 aaKnown RBP24.1■■□□□ 1.45
SF3A1-205ENST00000463818 GREM2Q9H772 168 aa24.1■■□□□ 1.45
SF3A1-205ENST00000463818 LRRC37AA6NMS7 1700 aa24.1■■□□□ 1.45
SF3A1-205ENST00000463818 CST9Q5W186 159 aa24.09■■□□□ 1.45
SF3A1-205ENST00000463818 GLIS2Q9BZE0 524 aaPredicted RBP24.08■■□□□ 1.45
SF3A1-205ENST00000463818 MYH16Q9H6N6 1097 aa24.08■■□□□ 1.45
SF3A1-205ENST00000463818 BSDC1Q9NW68 430 aaPredicted RBP24.08■■□□□ 1.45
SF3A1-205ENST00000463818 XDHP47989 1333 aa24.08■■□□□ 1.44
SF3A1-205ENST00000463818 RTL9Q8NET4 1388 aa24.07■■□□□ 1.44
SF3A1-205ENST00000463818 ATP2B4P23634 1241 aa24.07■■□□□ 1.44
SF3A1-205ENST00000463818 SAMD7Q7Z3H4 446 aa24.07■■□□□ 1.44
SF3A1-205ENST00000463818 LINS1Q8NG48 757 aa24.07■■□□□ 1.44
SF3A1-205ENST00000463818 PCNTO95613 3336 aa24.07■■□□□ 1.44
SF3A1-205ENST00000463818 VIL1P09327 827 aaKnown RBP24.06■■□□□ 1.44
SF3A1-205ENST00000463818 RPS12P25398 132 aaKnown RBP24.06■■□□□ 1.44
SF3A1-205ENST00000463818 PLA2G12BQ9BX93 195 aa24.06■■□□□ 1.44
SF3A1-205ENST00000463818 MINPP1Q9UNW1 487 aa24.06■■□□□ 1.44
SF3A1-205ENST00000463818 CASP7P55210 303 aa24.05■■□□□ 1.44
SF3A1-205ENST00000463818 TBC1D10BQ4KMP7 808 aaPredicted RBP24.05■■□□□ 1.44
SF3A1-205ENST00000463818 RBM26Q5T8P6 1007 aaKnown RBP24.05■■□□□ 1.44
SF3A1-205ENST00000463818 CDC37L1Q7L3B6 337 aa24.05■■□□□ 1.44
SF3A1-205ENST00000463818 WTIPA6NIX2 430 aaPredicted RBP24.04■■□□□ 1.44
SF3A1-205ENST00000463818 CELF2O95319 508 aaKnown RBP24.04■■□□□ 1.44
SF3A1-205ENST00000463818 WDR33Q9C0J8 1336 aaKnown RBP24.04■■□□□ 1.44
SF3A1-205ENST00000463818 F6X3S4 739 aa24.03■■□□□ 1.44
SF3A1-205ENST00000463818 CSF1RP07333 972 aa24.03■■□□□ 1.44
SF3A1-205ENST00000463818 USP48Q86UV5 1035 aa24.03■■□□□ 1.44
SF3A1-205ENST00000463818 TLL2Q9Y6L7 1015 aa24.03■■□□□ 1.44
SF3A1-205ENST00000463818 FOXN1O15353 648 aa24.02■■□□□ 1.44
SF3A1-205ENST00000463818 EGFRP00533 1210 aa24.02■■□□□ 1.44
SF3A1-205ENST00000463818 ITGA6P23229 1130 aa24.02■■□□□ 1.44
SF3A1-205ENST00000463818 IGHMBP2P38935 993 aaKnown RBP24.02■■□□□ 1.44
SF3A1-205ENST00000463818 PAXIP1Q6ZW49 1069 aaPredicted RBP24.02■■□□□ 1.44
SF3A1-205ENST00000463818 WBP1LQ9NX94 342 aa24.02■■□□□ 1.44
SF3A1-205ENST00000463818 BEND3Q5T5X7 828 aa24.01■■□□□ 1.43
SF3A1-205ENST00000463818 TNS4Q8IZW8 715 aa24.01■■□□□ 1.43
SF3A1-205ENST00000463818 CCT4P50991 539 aaKnown RBP24■■□□□ 1.43
SF3A1-205ENST00000463818 CYP4F22Q6NT55 531 aa24■■□□□ 1.43
SF3A1-205ENST00000463818 PODNQ7Z5L7 613 aa24■■□□□ 1.43
SF3A1-205ENST00000463818 AIDAQ96BJ3 306 aa24■■□□□ 1.43
SF3A1-205ENST00000463818 CAPNS2Q96L46 248 aa24■■□□□ 1.43
SF3A1-205ENST00000463818 ZNF408Q9H9D4 720 aa24■■□□□ 1.43
SF3A1-205ENST00000463818 ECE1P42892 770 aa23.99■■□□□ 1.43
SF3A1-205ENST00000463818 FAM161AQ3B820 660 aa23.99■■□□□ 1.43
SF3A1-205ENST00000463818 RSBN1LQ6PCB5 846 aaPredicted RBP23.99■■□□□ 1.43
SF3A1-205ENST00000463818 AGBL3Q8NEM8 1001 aa23.99■■□□□ 1.43
SF3A1-205ENST00000463818 MPHOSPH8Q99549 860 aa23.99■■□□□ 1.43
SF3A1-205ENST00000463818 GRM1Q13255 1194 aa23.98■■□□□ 1.43
SF3A1-205ENST00000463818 DLK2Q6UY11 383 aa23.98■■□□□ 1.43
SF3A1-205ENST00000463818 SAPCD2Q86UD0 394 aa23.98■■□□□ 1.43
SF3A1-205ENST00000463818 LEMD3Q9Y2U8 911 aa23.98■■□□□ 1.43
SF3A1-205ENST00000463818 ZNF521Q96K83 1311 aa23.98■■□□□ 1.43
SF3A1-205ENST00000463818 USP17L3A6NCW0 530 aa23.97■■□□□ 1.43
SF3A1-205ENST00000463818 USP17L4A6NCW7 530 aa23.97■■□□□ 1.43
SF3A1-205ENST00000463818 CTCFP49711 727 aaPredicted RBP23.97■■□□□ 1.43
SF3A1-205ENST00000463818 MAP2K1Q02750 393 aaPredicted RBP23.97■■□□□ 1.43
SF3A1-205ENST00000463818 KIF4BQ2VIQ3 1234 aa23.97■■□□□ 1.43
SF3A1-205ENST00000463818 USP17L1Q7RTZ2 530 aa23.97■■□□□ 1.43
SF3A1-205ENST00000463818 KRT26Q7Z3Y9 468 aa23.97■■□□□ 1.43
SF3A1-205ENST00000463818 DCPSQ96C86 337 aaKnown RBP23.97■■□□□ 1.43
SF3A1-205ENST00000463818 ANKRD18BA2A2Z9 1011 aa23.96■■□□□ 1.43
SF3A1-205ENST00000463818 ZNF280AP59817 542 aaPredicted RBP23.96■■□□□ 1.43
SF3A1-205ENST00000463818 FOXO4P98177 505 aa23.96■■□□□ 1.43
SF3A1-205ENST00000463818 GMLQ99445 158 aa23.96■■□□□ 1.43
SF3A1-205ENST00000463818 ANKRD2Q9GZV1 360 aa23.96■■□□□ 1.43
SF3A1-205ENST00000463818 MED23Q9ULK4 1368 aa23.95■■□□□ 1.42
SF3A1-205ENST00000463818 TXNRD3Q86VQ6 643 aa23.95■■□□□ 1.42
SF3A1-205ENST00000463818 ZNF804BA4D1E1 1349 aa23.94■■□□□ 1.42
SF3A1-205ENST00000463818 PRDM10Q9NQV6 1147 aa23.94■■□□□ 1.42
SF3A1-205ENST00000463818 USP17L8P0C7I0 530 aa23.93■■□□□ 1.42
SF3A1-205ENST00000463818 IFIT5Q13325 482 aaKnown RBP23.93■■□□□ 1.42
SF3A1-205ENST00000463818 SCARF1Q14162 830 aa23.93■■□□□ 1.42
SF3A1-205ENST00000463818 SLC4A10Q6U841 1118 aa23.93■■□□□ 1.42
SF3A1-205ENST00000463818 HHIPL1Q96JK4 782 aa23.93■■□□□ 1.42
SF3A1-205ENST00000463818 COA1Q9GZY4 146 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms