RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 COL22A1Q8NFW1 1626 aaPredicted RBP9.15□□□□□ -0.94
VPS8-216ENST00000463687 MED1Q15648 1581 aaPredicted RBP9.15□□□□□ -0.95
VPS8-216ENST00000463687 PTCD1O75127 700 aaKnown RBP9.14□□□□□ -0.95
VPS8-216ENST00000463687 DKK1O94907 266 aa9.14□□□□□ -0.95
VPS8-216ENST00000463687 CHRNA2Q15822 529 aa9.14□□□□□ -0.95
VPS8-216ENST00000463687 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
VPS8-216ENST00000463687 POTEAQ6S8J7 498 aa9.14□□□□□ -0.95
VPS8-216ENST00000463687 QTRT2Q9H974 415 aaKnown RBP9.14□□□□□ -0.95
VPS8-216ENST00000463687 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
VPS8-216ENST00000463687 TRPM3Q9HCF6 1732 aaPredicted RBP9.14□□□□□ -0.95
VPS8-216ENST00000463687 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
VPS8-216ENST00000463687 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
VPS8-216ENST00000463687 DXOO77932 396 aaKnown RBP9.13□□□□□ -0.95
VPS8-216ENST00000463687 SF3A1Q15459 793 aaKnown RBP9.13□□□□□ -0.95
VPS8-216ENST00000463687 TSNAXIP1Q2TAA8 658 aa9.13□□□□□ -0.95
VPS8-216ENST00000463687 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
VPS8-216ENST00000463687 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.13□□□□□ -0.95
VPS8-216ENST00000463687 SLIT2O94813 1529 aa9.13□□□□□ -0.95
VPS8-216ENST00000463687 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
VPS8-216ENST00000463687 NSD2O96028 1365 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
VPS8-216ENST00000463687 RXRBP28702 533 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 MMP16P51512 607 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 EVA1CP58658 441 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 RBM6P78332 1123 aaKnown RBP9.12□□□□□ -0.95
VPS8-216ENST00000463687 USP4Q13107 963 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 VPS72Q15906 364 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 CCDC24Q8N4L8 307 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 MKNK1Q9BUB5 465 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 BCL9LQ86UU0 1499 aa9.12□□□□□ -0.95
VPS8-216ENST00000463687 SLIT3O75094 1523 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 ALS2Q96Q42 1657 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 RECKO95980 971 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 FBLN1P23142 703 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 MORC1Q86VD1 984 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 STRN4Q9NRL3 753 aa9.11□□□□□ -0.95
VPS8-216ENST00000463687 PPP1R1BQ9UD71 204 aaPredicted RBP9.11□□□□□ -0.95
VPS8-216ENST00000463687 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
VPS8-216ENST00000463687 DNMT3AQ9Y6K1 912 aaPredicted RBP9.11□□□□□ -0.95
VPS8-216ENST00000463687 MAP3K19Q56UN5 1328 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 MAGEB6P1A0A0J9YX57 407 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
VPS8-216ENST00000463687 GGCXP38435 758 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 AMPHP49418 695 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
VPS8-216ENST00000463687 RRS1Q15050 365 aaKnown RBP9.1□□□□□ -0.95
VPS8-216ENST00000463687 NAALADL2Q58DX5 795 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 ZNF787Q6DD87 383 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 IP6K1Q92551 441 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 SEPT3Q9UH03 358 aa9.1□□□□□ -0.95
VPS8-216ENST00000463687 ATRNO75882 1429 aa9.09□□□□□ -0.95
VPS8-216ENST00000463687 CC2D1BQ5T0F9 858 aaKnown RBP9.09□□□□□ -0.95
VPS8-216ENST00000463687 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
VPS8-216ENST00000463687 UBXN4Q92575 508 aa9.09□□□□□ -0.95
VPS8-216ENST00000463687 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
VPS8-216ENST00000463687 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
VPS8-216ENST00000463687 NPC1L1Q9UHC9 1359 aa9.09□□□□□ -0.95
VPS8-216ENST00000463687 SPATA31A5Q5VU36 1347 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 SPATA31A7Q8IWB4 1347 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 NRKQ7Z2Y5 1582 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 PIK3C2AO00443 1686 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
VPS8-216ENST00000463687 HOXC9P31274 260 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 TNNT2P45379 298 aaPredicted RBP9.08□□□□□ -0.96
VPS8-216ENST00000463687 ARHGAP4P98171 946 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 DDX10Q13206 875 aaKnown RBP9.08□□□□□ -0.96
VPS8-216ENST00000463687 AGERQ15109 404 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 POLKQ9UBT6 870 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 KIF24Q5T7B8 1368 aa9.08□□□□□ -0.96
VPS8-216ENST00000463687 SPATA31A1Q5TZJ5 1347 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 WDR17Q8IZU2 1322 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 NFAT5O94916 1531 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 M0R2N6 131 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 LGR5O75473 907 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 FAM13AO94988 1023 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 WEE1P30291 646 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 FGD1P98174 961 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 PLA2G2CQ5R387 149 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 TOM1L2Q6ZVM7 507 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 BPHLQ86WA6 291 aaPredicted RBP9.07□□□□□ -0.96
VPS8-216ENST00000463687 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 THRAP3Q9Y2W1 955 aaKnown RBP9.07□□□□□ -0.96
VPS8-216ENST00000463687 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 MON2Q7Z3U7 1717 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 RTL1A6NKG5 1358 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
VPS8-216ENST00000463687 PPM1GO15355 546 aaPredicted RBP9.06□□□□□ -0.96
VPS8-216ENST00000463687 MTMR3Q13615 1198 aa9.06□□□□□ -0.96
VPS8-216ENST00000463687 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
VPS8-216ENST00000463687 HSP90AB2PQ58FF8 381 aa9.06□□□□□ -0.96
VPS8-216ENST00000463687 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
VPS8-216ENST00000463687 ILDR2Q71H61 639 aa9.06□□□□□ -0.96
VPS8-216ENST00000463687 SLC10A4Q96EP9 437 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms