RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 POLLQ9UGP5 575 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 PTPRCP08575 1304 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
HDAC1-203ENST00000463172 RAD17O75943 681 aa16.58■□□□□ 0.24
HDAC1-203ENST00000463172 SCNN1DP51172 638 aa16.58■□□□□ 0.24
HDAC1-203ENST00000463172 ADARB2Q9NS39 739 aaKnown RBP16.58■□□□□ 0.24
HDAC1-203ENST00000463172 GPRC5DQ9NZD1 345 aa16.58■□□□□ 0.24
HDAC1-203ENST00000463172 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
HDAC1-203ENST00000463172 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 GRM8O00222 908 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 ECE2O60344 883 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 ITGA6P23229 1130 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 GMPSP49915 693 aaPredicted RBP16.57■□□□□ 0.24
HDAC1-203ENST00000463172 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 ANKRD2Q9GZV1 360 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
HDAC1-203ENST00000463172 H7C1D1 291 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 CSF1RP07333 972 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 POTEJP0CG39 1038 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 RPS12P25398 132 aaKnown RBP16.56■□□□□ 0.24
HDAC1-203ENST00000463172 EPS15P42566 896 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 CASP7P55210 303 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 IFIT5Q13325 482 aaKnown RBP16.56■□□□□ 0.24
HDAC1-203ENST00000463172 MRPL50Q8N5N7 158 aaKnown RBP16.56■□□□□ 0.24
HDAC1-203ENST00000463172 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 CHMP3Q9Y3E7 222 aa16.56■□□□□ 0.24
HDAC1-203ENST00000463172 DOK7Q18PE1 504 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 MINPP1Q9UNW1 487 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 LEMD3Q9Y2U8 911 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 COL4A1P02462 1669 aa16.55■□□□□ 0.24
HDAC1-203ENST00000463172 KCNJ4P48050 445 aa16.54■□□□□ 0.24
HDAC1-203ENST00000463172 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
HDAC1-203ENST00000463172 DNAJC5GQ8N7S2 189 aa16.54■□□□□ 0.24
HDAC1-203ENST00000463172 DPF2Q92785 391 aa16.54■□□□□ 0.24
HDAC1-203ENST00000463172 SMC4Q9NTJ3 1288 aa16.54■□□□□ 0.24
HDAC1-203ENST00000463172 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 YDJCA8MPS7 323 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 PSMD14O00487 310 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
HDAC1-203ENST00000463172 HTRA3P83110 453 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 MAP1SQ66K74 1059 aaPredicted RBP16.53■□□□□ 0.24
HDAC1-203ENST00000463172 PODNQ7Z5L7 613 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 SSH1Q8WYL5 1049 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
HDAC1-203ENST00000463172 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
HDAC1-203ENST00000463172 MED23Q9ULK4 1368 aa16.52■□□□□ 0.24
HDAC1-203ENST00000463172 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
HDAC1-203ENST00000463172 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.24
HDAC1-203ENST00000463172 GPR101Q96P66 508 aaPredicted RBP16.52■□□□□ 0.24
HDAC1-203ENST00000463172 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
HDAC1-203ENST00000463172 FOXO4P98177 505 aa16.51■□□□□ 0.23
HDAC1-203ENST00000463172 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
HDAC1-203ENST00000463172 MICALL2Q8IY33 904 aa16.51■□□□□ 0.23
HDAC1-203ENST00000463172 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
HDAC1-203ENST00000463172 PSME4Q14997 1843 aa16.5■□□□□ 0.23
HDAC1-203ENST00000463172 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
HDAC1-203ENST00000463172 COA1Q9GZY4 146 aa16.5■□□□□ 0.23
HDAC1-203ENST00000463172 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
HDAC1-203ENST00000463172 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
HDAC1-203ENST00000463172 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
HDAC1-203ENST00000463172 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
HDAC1-203ENST00000463172 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
HDAC1-203ENST00000463172 MIER1Q8N108 512 aa16.49■□□□□ 0.23
HDAC1-203ENST00000463172 AGBL3Q8NEM8 1001 aa16.49■□□□□ 0.23
HDAC1-203ENST00000463172 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
HDAC1-203ENST00000463172 CNNM1Q9NRU3 951 aa16.49■□□□□ 0.23
HDAC1-203ENST00000463172 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
HDAC1-203ENST00000463172 SCN9AQ15858 1988 aa16.48■□□□□ 0.23
HDAC1-203ENST00000463172 CHRNDQ07001 517 aa16.48■□□□□ 0.23
HDAC1-203ENST00000463172 RSBN1LQ6PCB5 846 aaPredicted RBP16.48■□□□□ 0.23
HDAC1-203ENST00000463172 LDHAL6AQ6ZMR3 332 aa16.48■□□□□ 0.23
HDAC1-203ENST00000463172 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
HDAC1-203ENST00000463172 UTYO14607 1347 aa16.47■□□□□ 0.23
HDAC1-203ENST00000463172 MYO3BQ8WXR4 1341 aa16.47■□□□□ 0.23
HDAC1-203ENST00000463172 MMP14P50281 582 aa16.47■□□□□ 0.23
HDAC1-203ENST00000463172 CDC37L1Q7L3B6 337 aa16.47■□□□□ 0.23
HDAC1-203ENST00000463172 ABT1Q9ULW3 272 aaKnown RBP16.47■□□□□ 0.23
HDAC1-203ENST00000463172 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
HDAC1-203ENST00000463172 ZNF609O15014 1411 aa16.46■□□□□ 0.23
HDAC1-203ENST00000463172 NBPF7P0C2Y1 421 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-203ENST00000463172 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
HDAC1-203ENST00000463172 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC1-203ENST00000463172 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
HDAC1-203ENST00000463172 SUCLG2Q96I99 432 aa16.46■□□□□ 0.23
HDAC1-203ENST00000463172 KCNQ5Q9NR82 932 aa16.46■□□□□ 0.23
HDAC1-203ENST00000463172 PGAP2Q9UHJ9 254 aa16.46■□□□□ 0.23
HDAC1-203ENST00000463172 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
HDAC1-203ENST00000463172 TBC1D10BQ4KMP7 808 aaPredicted RBP16.45■□□□□ 0.22
HDAC1-203ENST00000463172 EPHA10Q5JZY3 1008 aa16.45■□□□□ 0.22
HDAC1-203ENST00000463172 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
HDAC1-203ENST00000463172 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
HDAC1-203ENST00000463172 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
HDAC1-203ENST00000463172 TRPM4Q8TD43 1214 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms