RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 XDHP47989 1333 aa23.79■■□□□ 1.4
COL9A3-203ENST00000462700 ANKRD18BA2A2Z9 1011 aa23.78■■□□□ 1.4
COL9A3-203ENST00000462700 IQCA1LA6NCM1 817 aa23.78■■□□□ 1.4
COL9A3-203ENST00000462700 UFL1O94874 794 aa23.78■■□□□ 1.4
COL9A3-203ENST00000462700 GPR101Q96P66 508 aaPredicted RBP23.78■■□□□ 1.4
COL9A3-203ENST00000462700 MINPP1Q9UNW1 487 aa23.78■■□□□ 1.4
COL9A3-203ENST00000462700 CHMP3Q9Y3E7 222 aa23.78■■□□□ 1.4
COL9A3-203ENST00000462700 GJA3Q9Y6H8 435 aa23.78■■□□□ 1.4
COL9A3-203ENST00000462700 RIMBP2O15034 1052 aa23.77■■□□□ 1.4
COL9A3-203ENST00000462700 IFIT5Q13325 482 aaKnown RBP23.77■■□□□ 1.4
COL9A3-203ENST00000462700 KAZALD1Q96I82 304 aa23.77■■□□□ 1.4
COL9A3-203ENST00000462700 CCT4P50991 539 aaKnown RBP23.76■■□□□ 1.39
COL9A3-203ENST00000462700 CXCL9Q07325 125 aa23.76■■□□□ 1.39
COL9A3-203ENST00000462700 ARHGAP45Q92619 1136 aa23.76■■□□□ 1.39
COL9A3-203ENST00000462700 MPHOSPH8Q99549 860 aa23.76■■□□□ 1.39
COL9A3-203ENST00000462700 USP44Q9H0E7 712 aa23.76■■□□□ 1.39
COL9A3-203ENST00000462700 SPEF2Q9C093 1822 aa23.75■■□□□ 1.39
COL9A3-203ENST00000462700 ATP2B4P23634 1241 aa23.75■■□□□ 1.39
COL9A3-203ENST00000462700 YDJCA8MPS7 323 aa23.74■■□□□ 1.39
COL9A3-203ENST00000462700 BCAR3O75815 825 aa23.74■■□□□ 1.39
COL9A3-203ENST00000462700 FSTL1Q12841 308 aa23.74■■□□□ 1.39
COL9A3-203ENST00000462700 CCDC57Q2TAC2 916 aa23.74■■□□□ 1.39
COL9A3-203ENST00000462700 ZC3H12CQ9C0D7 883 aaKnown RBP23.74■■□□□ 1.39
COL9A3-203ENST00000462700 TAF1DQ9H5J8 278 aaPredicted RBP23.74■■□□□ 1.39
COL9A3-203ENST00000462700 DBNDD1Q9H9R9 158 aa23.74■■□□□ 1.39
COL9A3-203ENST00000462700 HACL1Q9UJ83 578 aa23.74■■□□□ 1.39
COL9A3-203ENST00000462700 SCN4AP35499 1836 aa23.73■■□□□ 1.39
COL9A3-203ENST00000462700 CIAPIN1Q6FI81 312 aa23.73■■□□□ 1.39
COL9A3-203ENST00000462700 SMC1BQ8NDV3 1235 aa23.73■■□□□ 1.39
COL9A3-203ENST00000462700 BICC1Q9H694 974 aaKnown RBP23.73■■□□□ 1.39
COL9A3-203ENST00000462700 ECE2O60344 883 aa23.72■■□□□ 1.39
COL9A3-203ENST00000462700 RAD17O75943 681 aa23.72■■□□□ 1.39
COL9A3-203ENST00000462700 SCNN1DP51172 638 aa23.72■■□□□ 1.39
COL9A3-203ENST00000462700 DOK7Q18PE1 504 aa23.72■■□□□ 1.39
COL9A3-203ENST00000462700 RABL6Q3YEC7 729 aaPredicted RBP23.72■■□□□ 1.39
COL9A3-203ENST00000462700 HSPA6P17066 643 aa23.71■■□□□ 1.39
COL9A3-203ENST00000462700 EPHX2P34913 555 aa23.71■■□□□ 1.39
COL9A3-203ENST00000462700 ANKRD2Q9GZV1 360 aa23.71■■□□□ 1.39
COL9A3-203ENST00000462700 WTIPA6NIX2 430 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-203ENST00000462700 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
COL9A3-203ENST00000462700 POTEIP0CG38 1075 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 POTEJP0CG39 1038 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 LMOD1P29536 600 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-203ENST00000462700 CHRNDQ07001 517 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 TNIP1Q15025 636 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 TAF7LQ5H9L4 462 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 ANKRD44Q8N8A2 993 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 FRAT1Q92837 279 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-203ENST00000462700 ZNF594Q96JF6 807 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-203ENST00000462700 LEMD3Q9Y2U8 911 aa23.7■■□□□ 1.38
COL9A3-203ENST00000462700 MED23Q9ULK4 1368 aa23.69■■□□□ 1.38
COL9A3-203ENST00000462700 TRIM27P14373 513 aa23.69■■□□□ 1.38
COL9A3-203ENST00000462700 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
COL9A3-203ENST00000462700 INTS3Q68E01 1043 aaKnown RBP23.68■■□□□ 1.38
COL9A3-203ENST00000462700 LDHAL6AQ6ZMR3 332 aa23.68■■□□□ 1.38
COL9A3-203ENST00000462700 ZNF804BA4D1E1 1349 aa23.67■■□□□ 1.38
COL9A3-203ENST00000462700 G3V3G9 751 aa23.67■■□□□ 1.38
COL9A3-203ENST00000462700 EPS15P42566 896 aa23.67■■□□□ 1.38
COL9A3-203ENST00000462700 GMPSP49915 693 aaPredicted RBP23.67■■□□□ 1.38
COL9A3-203ENST00000462700 EAPPQ56P03 285 aaPredicted RBP23.67■■□□□ 1.38
COL9A3-203ENST00000462700 DCAF8Q5TAQ9 597 aa23.67■■□□□ 1.38
COL9A3-203ENST00000462700 LDHDQ86WU2 507 aa23.67■■□□□ 1.38
COL9A3-203ENST00000462700 PSMD14O00487 310 aa23.66■■□□□ 1.38
COL9A3-203ENST00000462700 UBTFL1P0CB47 393 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-203ENST00000462700 CHADLQ6NUI6 762 aa23.66■■□□□ 1.38
COL9A3-203ENST00000462700 PNMA8AQ86V59 439 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-203ENST00000462700 KCNQ5Q9NR82 932 aa23.66■■□□□ 1.38
COL9A3-203ENST00000462700 CNNM1Q9NRU3 951 aa23.66■■□□□ 1.38
COL9A3-203ENST00000462700 GPRC5DQ9NZD1 345 aa23.66■■□□□ 1.38
COL9A3-203ENST00000462700 TNNQ9UQP3 1299 aa23.66■■□□□ 1.38
COL9A3-203ENST00000462700 TAF5LO75529 589 aa23.64■■□□□ 1.37
COL9A3-203ENST00000462700 KCNJ4P48050 445 aa23.64■■□□□ 1.37
COL9A3-203ENST00000462700 ZKSCAN2Q63HK3 967 aa23.64■■□□□ 1.37
COL9A3-203ENST00000462700 HELBQ8NG08 1087 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-203ENST00000462700 ADAMTSL1Q8N6G6 1762 aa23.64■■□□□ 1.37
COL9A3-203ENST00000462700 KLRK1P26718 216 aa23.63■■□□□ 1.37
COL9A3-203ENST00000462700 PODNQ7Z5L7 613 aa23.63■■□□□ 1.37
COL9A3-203ENST00000462700 TXNRD3Q86VQ6 643 aa23.63■■□□□ 1.37
COL9A3-203ENST00000462700 CLUAP1Q96AJ1 413 aa23.63■■□□□ 1.37
COL9A3-203ENST00000462700 MEIS3Q99687 375 aa23.63■■□□□ 1.37
COL9A3-203ENST00000462700 PUS3Q9BZE2 481 aaKnown RBP23.63■■□□□ 1.37
COL9A3-203ENST00000462700 ZBTB12Q9Y330 459 aaPredicted RBP23.63■■□□□ 1.37
COL9A3-203ENST00000462700 SNAP23O00161 211 aa23.62■■□□□ 1.37
COL9A3-203ENST00000462700 USP50Q70EL3 339 aaPredicted RBP23.62■■□□□ 1.37
COL9A3-203ENST00000462700 ADARB2Q9NS39 739 aaKnown RBP23.62■■□□□ 1.37
COL9A3-203ENST00000462700 A0A1B0GUL6 1792 aa23.62■■□□□ 1.37
COL9A3-203ENST00000462700 VIL1P09327 827 aaKnown RBP23.61■■□□□ 1.37
COL9A3-203ENST00000462700 RPS12P25398 132 aaKnown RBP23.61■■□□□ 1.37
COL9A3-203ENST00000462700 APLP1P51693 650 aa23.61■■□□□ 1.37
COL9A3-203ENST00000462700 DPF2Q92785 391 aa23.61■■□□□ 1.37
COL9A3-203ENST00000462700 COA1Q9GZY4 146 aa23.61■■□□□ 1.37
COL9A3-203ENST00000462700 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
COL9A3-203ENST00000462700 CLEC11AQ9Y240 323 aa23.61■■□□□ 1.37
COL9A3-203ENST00000462700 IRS2Q9Y4H2 1338 aa23.6■■□□□ 1.37
COL9A3-203ENST00000462700 SCN9AQ15858 1988 aa23.6■■□□□ 1.37
COL9A3-203ENST00000462700 RIPOR2Q9Y4F9 1068 aa23.6■■□□□ 1.37
COL9A3-203ENST00000462700 LRRFIP2Q9Y608 721 aaKnown RBP23.6■■□□□ 1.37
COL9A3-203ENST00000462700 PLIN1O60240 522 aa23.59■■□□□ 1.37
COL9A3-203ENST00000462700 GNAI3P08754 354 aa23.59■■□□□ 1.37
COL9A3-203ENST00000462700 RFX5P48382 616 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms