RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 LGR6Q9HBX8 967 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 POLR3EQ9NVU0 708 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 ADAMTS8Q9UP79 889 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 ARFGEF1Q9Y6D6 1849 aa6.84□□□□□ -1.31
PDCD4-204ENST00000462577 MYH3P11055 1940 aa6.84□□□□□ -1.32
PDCD4-204ENST00000462577 CHD4Q14839 1912 aa6.84□□□□□ -1.32
PDCD4-204ENST00000462577 ANKRD31Q8N7Z5 1873 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 SPDYE5A6NIY4 337 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 CCER2I3L3R5 266 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 GDF9O60383 454 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 LMOD3Q0VAK6 560 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 FOXC1Q12948 553 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 NUDT12Q9BQG2 462 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 LRRC4BQ9NT99 713 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 ASAP1Q9ULH1 1129 aa6.83□□□□□ -1.32
PDCD4-204ENST00000462577 CNTNAP4Q9C0A0 1308 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 LOC102724428A0A0B4J2F2 783 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 CFAP99D6REC4 459 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 TMPOP42166 694 aaKnown RBP6.82□□□□□ -1.32
PDCD4-204ENST00000462577 SIK1P57059 783 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 QPCTQ16769 361 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 PTCRAQ6ISU1 281 aaPredicted RBP6.82□□□□□ -1.32
PDCD4-204ENST00000462577 RTF1Q92541 710 aaKnown RBP6.82□□□□□ -1.32
PDCD4-204ENST00000462577 ZBTB3Q9H5J0 574 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 MRS2Q9HD23 443 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 BABAM1Q9NWV8 329 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 PKD2L1Q9P0L9 805 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 CCNL1Q9UK58 526 aaPredicted RBP6.82□□□□□ -1.32
PDCD4-204ENST00000462577 HEG1Q9ULI3 1381 aa6.82□□□□□ -1.32
PDCD4-204ENST00000462577 CLK2P49760 499 aaKnown RBP6.81□□□□□ -1.32
PDCD4-204ENST00000462577 PRR20EP86478 221 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 PRR20CP86479 221 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 PRR20DP86480 221 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 PRR20BP86481 221 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 PRR20AP86496 221 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 TEFQ10587 303 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 TRIM32Q13049 653 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 SLC15A2Q16348 729 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 CCDC27Q2M243 656 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 RC3H1Q5TC82 1133 aaKnown RBP6.81□□□□□ -1.32
PDCD4-204ENST00000462577 PRPF38BQ5VTL8 546 aaKnown RBP6.81□□□□□ -1.32
PDCD4-204ENST00000462577 SLC4A9Q96Q91 983 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 STK32BQ9NY57 414 aa6.81□□□□□ -1.32
PDCD4-204ENST00000462577 LCE2BO14633 110 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 LILRB3O75022 631 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 CCNYL3P0C7X3 344 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 COL11A2P13942 1736 aaPredicted RBP6.8□□□□□ -1.32
PDCD4-204ENST00000462577 RIPK4P57078 832 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 ITPK1Q13572 414 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 NEUROD2Q15784 382 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 ZNF827Q17R98 1081 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 TUSC1Q2TAM9 212 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 CCDC88AQ3V6T2 1871 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 DIEXFQ68CQ4 756 aaKnown RBP6.8□□□□□ -1.32
PDCD4-204ENST00000462577 DESI1Q6ICB0 168 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 ZNF790Q6PG37 636 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 MCM10Q7L590 875 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 DDX60Q8IY21 1712 aaKnown RBP6.8□□□□□ -1.32
PDCD4-204ENST00000462577 CCDC146Q8IYE0 955 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 NGEFQ8N5V2 710 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
PDCD4-204ENST00000462577 PNPLA7Q6ZV29 1317 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 R3HDM1Q15032 1099 aaKnown RBP6.79□□□□□ -1.32
PDCD4-204ENST00000462577 TAF7Q15545 349 aaPredicted RBP6.79□□□□□ -1.32
PDCD4-204ENST00000462577 PTPRNQ16849 979 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
PDCD4-204ENST00000462577 TTC5Q8N0Z6 440 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 LINC00116Q8NCU8 138 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 FLAD1Q8NFF5 587 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 SLC16A10Q8TF71 515 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 TSC1Q92574 1164 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 FMNL2Q96PY5 1086 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 TEX13AQ9BXU3 409 aaPredicted RBP6.79□□□□□ -1.32
PDCD4-204ENST00000462577 EVA1BQ9NVM1 165 aa6.79□□□□□ -1.32
PDCD4-204ENST00000462577 DICER1Q9UPY3 1922 aaKnown RBP6.79□□□□□ -1.32
PDCD4-204ENST00000462577 BTBD11A6QL63 1104 aa6.78□□□□□ -1.32
PDCD4-204ENST00000462577 APAF1O14727 1248 aa6.78□□□□□ -1.32
PDCD4-204ENST00000462577 CYP19A1P11511 503 aaPredicted RBP6.78□□□□□ -1.32
PDCD4-204ENST00000462577 SSFA2P28290 1259 aa6.78□□□□□ -1.32
PDCD4-204ENST00000462577 CALD1Q05682 793 aaKnown RBP6.78□□□□□ -1.32
PDCD4-204ENST00000462577 SLC39A6Q13433 755 aa6.78□□□□□ -1.32
PDCD4-204ENST00000462577 DCTN1Q14203 1278 aa6.78□□□□□ -1.32
PDCD4-204ENST00000462577 SKIV2LQ15477 1246 aaKnown RBP6.78□□□□□ -1.32
PDCD4-204ENST00000462577 LYPD8Q6UX82 237 aa6.78□□□□□ -1.32
PDCD4-204ENST00000462577 PROCA1Q8NCQ7 364 aaPredicted RBP6.78□□□□□ -1.32
PDCD4-204ENST00000462577 ZNF496Q96IT1 587 aaPredicted RBP6.78□□□□□ -1.32
PDCD4-204ENST00000462577 IL16Q14005 1332 aa6.77□□□□□ -1.32
PDCD4-204ENST00000462577 SBF1O95248 1867 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 ZNF853P0CG23 659 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 KCNQ4P56696 695 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 SKOR1P84550 965 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 KCNH2Q12809 1159 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 SH3D19Q5HYK7 790 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 TRAF7Q6Q0C0 670 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 A0A1B0GUL6 1792 aa6.77□□□□□ -1.33
PDCD4-204ENST00000462577 SOS1Q07889 1333 aaPredicted RBP6.76□□□□□ -1.33
PDCD4-204ENST00000462577 ERBB4Q15303 1308 aa6.76□□□□□ -1.33
PDCD4-204ENST00000462577 SPEF2Q9C093 1822 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms