RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 PCDHB15Q9Y5E8 787 aa23.95■■□□□ 1.43
XPA-202ENST00000462523 CCDC93Q567U6 631 aa23.95■■□□□ 1.42
XPA-202ENST00000462523 COPRSQ9NQ92 184 aa23.95■■□□□ 1.42
XPA-202ENST00000462523 RIPOR2Q9Y4F9 1068 aa23.95■■□□□ 1.42
XPA-202ENST00000462523 NFKBIEO00221 500 aa23.94■■□□□ 1.42
XPA-202ENST00000462523 GPSM2P81274 684 aa23.94■■□□□ 1.42
XPA-202ENST00000462523 RPAP2Q8IXW5 612 aaPredicted RBP23.94■■□□□ 1.42
XPA-202ENST00000462523 ATG9AQ7Z3C6 839 aa23.93■■□□□ 1.42
XPA-202ENST00000462523 SIL1Q9H173 461 aa23.93■■□□□ 1.42
XPA-202ENST00000462523 WTIPA6NIX2 430 aaPredicted RBP23.92■■□□□ 1.42
XPA-202ENST00000462523 SOGA3Q5TF21 947 aa23.92■■□□□ 1.42
XPA-202ENST00000462523 CC2D2BQ6DHV5 1058 aa23.92■■□□□ 1.42
XPA-202ENST00000462523 EYA2O00167 538 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 PRELPP51888 382 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 CHRNDQ07001 517 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 CNNM1Q9NRU3 951 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 SBF1O95248 1867 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 RASSF7Q02833 373 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 ARHGAP27Q6ZUM4 889 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 RTKN2Q8IZC4 609 aa23.91■■□□□ 1.42
XPA-202ENST00000462523 MPNDQ8N594 471 aa23.9■■□□□ 1.42
XPA-202ENST00000462523 HELBQ8NG08 1087 aaPredicted RBP23.9■■□□□ 1.42
XPA-202ENST00000462523 PODXL2Q9NZ53 605 aa23.9■■□□□ 1.42
XPA-202ENST00000462523 NSFL1CQ9UNZ2 370 aaKnown RBP23.9■■□□□ 1.42
XPA-202ENST00000462523 GRIN3BO60391 1043 aa23.89■■□□□ 1.41
XPA-202ENST00000462523 CIAO1O76071 339 aa23.89■■□□□ 1.41
XPA-202ENST00000462523 AAMPQ13685 434 aa23.89■■□□□ 1.41
XPA-202ENST00000462523 VGLL2Q8N8G2 317 aa23.89■■□□□ 1.41
XPA-202ENST00000462523 RTFDC1Q9BY42 306 aaPredicted RBP23.89■■□□□ 1.41
XPA-202ENST00000462523 POLLQ9UGP5 575 aa23.89■■□□□ 1.41
XPA-202ENST00000462523 CCDC88AQ3V6T2 1871 aa23.89■■□□□ 1.41
XPA-202ENST00000462523 XDHP47989 1333 aa23.88■■□□□ 1.41
XPA-202ENST00000462523 LTBP3Q9NS15 1303 aa23.88■■□□□ 1.41
XPA-202ENST00000462523 TAF5LO75529 589 aa23.88■■□□□ 1.41
XPA-202ENST00000462523 FKBP4Q02790 459 aaKnown RBP eCLIP23.88■■□□□ 1.41
XPA-202ENST00000462523 DPP8Q6V1X1 898 aaPredicted RBP23.88■■□□□ 1.41
XPA-202ENST00000462523 PSMD1Q99460 953 aa23.88■■□□□ 1.41
XPA-202ENST00000462523 FBXO3Q9UK99 471 aa23.88■■□□□ 1.41
XPA-202ENST00000462523 SNAP23O00161 211 aa23.87■■□□□ 1.41
XPA-202ENST00000462523 GRIPAP1Q4V328 841 aa23.87■■□□□ 1.41
XPA-202ENST00000462523 TMX4Q9H1E5 349 aaPredicted RBP23.87■■□□□ 1.41
XPA-202ENST00000462523 TAOK3Q9H2K8 898 aa23.87■■□□□ 1.41
XPA-202ENST00000462523 ANKIB1Q9P2G1 1089 aa23.87■■□□□ 1.41
XPA-202ENST00000462523 NOP58Q9Y2X3 529 aaKnown RBP23.87■■□□□ 1.41
XPA-202ENST00000462523 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.87■■□□□ 1.41
XPA-202ENST00000462523 MROH5Q6ZUA9 1318 aa23.87■■□□□ 1.41
XPA-202ENST00000462523 COL4A5P29400 1685 aa23.87■■□□□ 1.41
XPA-202ENST00000462523 TBC1D16Q8TBP0 767 aa23.86■■□□□ 1.41
XPA-202ENST00000462523 GPR101Q96P66 508 aaPredicted RBP23.86■■□□□ 1.41
XPA-202ENST00000462523 ANKRD2Q9GZV1 360 aa23.86■■□□□ 1.41
XPA-202ENST00000462523 HMMRO75330 724 aa23.85■■□□□ 1.41
XPA-202ENST00000462523 SURF6O75683 361 aaKnown RBP23.85■■□□□ 1.41
XPA-202ENST00000462523 IL15P40933 162 aaPredicted RBP23.85■■□□□ 1.41
XPA-202ENST00000462523 METTL24Q5JXM2 366 aa23.85■■□□□ 1.41
XPA-202ENST00000462523 ZNF277Q9NRM2 450 aaPredicted RBP23.85■■□□□ 1.41
XPA-202ENST00000462523 EXOC6BQ9Y2D4 811 aa23.85■■□□□ 1.41
XPA-202ENST00000462523 UFL1O94874 794 aa23.84■■□□□ 1.41
XPA-202ENST00000462523 SASH1O94885 1247 aa23.84■■□□□ 1.41
XPA-202ENST00000462523 GGA1Q9UJY5 639 aa23.84■■□□□ 1.41
XPA-202ENST00000462523 IRS2Q9Y4H2 1338 aa23.83■■□□□ 1.41
XPA-202ENST00000462523 PDE8BO95263 885 aa23.82■■□□□ 1.4
XPA-202ENST00000462523 KLRK1P26718 216 aa23.82■■□□□ 1.4
XPA-202ENST00000462523 DICER1Q9UPY3 1922 aaKnown RBP23.82■■□□□ 1.4
XPA-202ENST00000462523 ZNF804BA4D1E1 1349 aa23.82■■□□□ 1.4
XPA-202ENST00000462523 C6orf229H3BNL8 230 aa23.82■■□□□ 1.4
XPA-202ENST00000462523 ATP2B4P23634 1241 aa23.82■■□□□ 1.4
XPA-202ENST00000462523 LEMD3Q9Y2U8 911 aa23.82■■□□□ 1.4
XPA-202ENST00000462523 TFCP2Q12800 502 aa23.81■■□□□ 1.4
XPA-202ENST00000462523 G3BP1Q13283 466 aaKnown RBP eCLIP23.81■■□□□ 1.4
XPA-202ENST00000462523 TXNRD3Q86VQ6 643 aa23.81■■□□□ 1.4
XPA-202ENST00000462523 DCAF8L1A6NGE4 600 aa23.8■■□□□ 1.4
XPA-202ENST00000462523 FGFR2P21802 821 aa23.8■■□□□ 1.4
XPA-202ENST00000462523 IARSP41252 1262 aaKnown RBP23.8■■□□□ 1.4
XPA-202ENST00000462523 AOC3Q16853 763 aa23.8■■□□□ 1.4
XPA-202ENST00000462523 TIAM2Q8IVF5 1701 aa23.8■■□□□ 1.4
XPA-202ENST00000462523 LMNB1P20700 586 aa23.79■■□□□ 1.4
XPA-202ENST00000462523 HDAC1Q13547 482 aaPredicted RBP23.79■■□□□ 1.4
XPA-202ENST00000462523 SUPT20HQ8NEM7 779 aa23.79■■□□□ 1.4
XPA-202ENST00000462523 CEP126Q9P2H0 1117 aa23.79■■□□□ 1.4
XPA-202ENST00000462523 ARAP2Q8WZ64 1704 aa23.79■■□□□ 1.4
XPA-202ENST00000462523 MED23Q9ULK4 1368 aa23.79■■□□□ 1.4
XPA-202ENST00000462523 KIAA2012Q0VF49 1180 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 UBE4AQ14139 1066 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 WASHC4Q2M389 1173 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 DCTPP1Q9H773 170 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 RIMBP2O15034 1052 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 IGHDP01880 384 aa23.78■■□□□ 1.4
XPA-202ENST00000462523 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
XPA-202ENST00000462523 CHD4Q14839 1912 aa23.77■■□□□ 1.4
XPA-202ENST00000462523 KCNJ4P48050 445 aa23.77■■□□□ 1.4
XPA-202ENST00000462523 PUM3Q15397 648 aaKnown RBP23.77■■□□□ 1.4
XPA-202ENST00000462523 ZNF609O15014 1411 aa23.76■■□□□ 1.39
XPA-202ENST00000462523 C9orf131Q5VYM1 1079 aa23.76■■□□□ 1.39
XPA-202ENST00000462523 C15orf52Q6ZUT6 534 aaKnown RBP23.76■■□□□ 1.39
XPA-202ENST00000462523 EYA3Q99504 573 aa23.76■■□□□ 1.39
XPA-202ENST00000462523 VPS33BQ9H267 617 aa23.76■■□□□ 1.39
XPA-202ENST00000462523 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
XPA-202ENST00000462523 APBB1O00213 710 aa23.75■■□□□ 1.39
XPA-202ENST00000462523 NEFLP07196 543 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms