RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 STK31Q9BXU1 1019 aa19.81■□□□□ 0.76
SKA3-204ENST00000462482 GGA1Q9UJY5 639 aa19.81■□□□□ 0.76
SKA3-204ENST00000462482 PCNTO95613 3336 aa19.81■□□□□ 0.76
SKA3-204ENST00000462482 NEXNQ0ZGT2 675 aa19.8■□□□□ 0.76
SKA3-204ENST00000462482 USP48Q86UV5 1035 aa19.8■□□□□ 0.76
SKA3-204ENST00000462482 DCPSQ96C86 337 aaKnown RBP19.8■□□□□ 0.76
SKA3-204ENST00000462482 METTL22Q9BUU2 404 aaPredicted RBP19.8■□□□□ 0.76
SKA3-204ENST00000462482 TBC1D10BQ4KMP7 808 aaPredicted RBP19.79■□□□□ 0.76
SKA3-204ENST00000462482 RBM26Q5T8P6 1007 aaKnown RBP19.79■□□□□ 0.76
SKA3-204ENST00000462482 SAMD7Q7Z3H4 446 aa19.79■□□□□ 0.76
SKA3-204ENST00000462482 ANKRD18AQ8IVF6 992 aa19.79■□□□□ 0.76
SKA3-204ENST00000462482 SEC31BQ9NQW1 1179 aa19.79■□□□□ 0.76
SKA3-204ENST00000462482 PODXL2Q9NZ53 605 aa19.79■□□□□ 0.76
SKA3-204ENST00000462482 CA12O43570 354 aa19.78■□□□□ 0.76
SKA3-204ENST00000462482 KRT26Q7Z3Y9 468 aa19.78■□□□□ 0.76
SKA3-204ENST00000462482 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
SKA3-204ENST00000462482 SHTN1A0MZ66 631 aa19.77■□□□□ 0.76
SKA3-204ENST00000462482 AOC2O75106 756 aa19.77■□□□□ 0.76
SKA3-204ENST00000462482 CCDC85AQ96PX6 553 aaPredicted RBP19.77■□□□□ 0.76
SKA3-204ENST00000462482 CDC5LQ99459 802 aaKnown RBP19.77■□□□□ 0.76
SKA3-204ENST00000462482 DUOX1Q9NRD9 1551 aa19.77■□□□□ 0.76
SKA3-204ENST00000462482 LAMB2P55268 1798 aa19.76■□□□□ 0.75
SKA3-204ENST00000462482 HUNKP57058 714 aa19.76■□□□□ 0.75
SKA3-204ENST00000462482 KSR2Q6VAB6 950 aa19.76■□□□□ 0.75
SKA3-204ENST00000462482 JARID2Q92833 1246 aaPredicted RBP19.76■□□□□ 0.75
SKA3-204ENST00000462482 XDHP47989 1333 aa19.76■□□□□ 0.75
SKA3-204ENST00000462482 VIL1P09327 827 aaKnown RBP19.75■□□□□ 0.75
SKA3-204ENST00000462482 ATP2B4P23634 1241 aa19.75■□□□□ 0.75
SKA3-204ENST00000462482 NOGQ13253 232 aa19.75■□□□□ 0.75
SKA3-204ENST00000462482 KIF4BQ2VIQ3 1234 aa19.75■□□□□ 0.75
SKA3-204ENST00000462482 SULF1Q8IWU6 871 aa19.75■□□□□ 0.75
SKA3-204ENST00000462482 C2orf69Q8N8R5 385 aa19.75■□□□□ 0.75
SKA3-204ENST00000462482 PI4KAP2A4QPH2 592 aa19.74■□□□□ 0.75
SKA3-204ENST00000462482 BRPF1P55201 1214 aaPredicted RBP19.74■□□□□ 0.75
SKA3-204ENST00000462482 PI4KAP1Q8N8J0 262 aa19.74■□□□□ 0.75
SKA3-204ENST00000462482 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
SKA3-204ENST00000462482 KCNQ5Q9NR82 932 aa19.74■□□□□ 0.75
SKA3-204ENST00000462482 LRRC37AA6NMS7 1700 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 RTL9Q8NET4 1388 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 CTSWP56202 376 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 TSPYL6Q8N831 410 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 AGBL3Q8NEM8 1001 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 ABHD8Q96I13 439 aa19.73■□□□□ 0.75
SKA3-204ENST00000462482 GBA2Q9HCG7 927 aaPredicted RBP19.73■□□□□ 0.75
SKA3-204ENST00000462482 DDX60Q8IY21 1712 aaKnown RBP19.73■□□□□ 0.75
SKA3-204ENST00000462482 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
SKA3-204ENST00000462482 RSBN1LQ6PCB5 846 aaPredicted RBP19.71■□□□□ 0.75
SKA3-204ENST00000462482 PODNQ7Z5L7 613 aa19.71■□□□□ 0.75
SKA3-204ENST00000462482 GGA3Q9NZ52 723 aa19.71■□□□□ 0.75
SKA3-204ENST00000462482 TSKSQ9UJT2 592 aa19.71■□□□□ 0.75
SKA3-204ENST00000462482 ADM5C9JUS6 153 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 EGFRP00533 1210 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 RGMBQ6NW40 437 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 WWC1Q8IX03 1113 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 CCDC102AQ96A19 550 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 IL16Q14005 1332 aa19.7■□□□□ 0.74
SKA3-204ENST00000462482 USP17L3A6NCW0 530 aa19.69■□□□□ 0.74
SKA3-204ENST00000462482 USP17L4A6NCW7 530 aa19.69■□□□□ 0.74
SKA3-204ENST00000462482 IGKV5-2P06315 115 aa19.69■□□□□ 0.74
SKA3-204ENST00000462482 USP17L8P0C7I0 530 aa19.69■□□□□ 0.74
SKA3-204ENST00000462482 IGHMBP2P38935 993 aaKnown RBP19.69■□□□□ 0.74
SKA3-204ENST00000462482 USP17L1Q7RTZ2 530 aa19.69■□□□□ 0.74
SKA3-204ENST00000462482 TTLL11Q8NHH1 800 aa19.69■□□□□ 0.74
SKA3-204ENST00000462482 BSDC1Q9NW68 430 aaPredicted RBP19.69■□□□□ 0.74
SKA3-204ENST00000462482 ZNF280AP59817 542 aaPredicted RBP19.68■□□□□ 0.74
SKA3-204ENST00000462482 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
SKA3-204ENST00000462482 MYH16Q9H6N6 1097 aa19.68■□□□□ 0.74
SKA3-204ENST00000462482 THSD7BQ9C0I4 1608 aa19.68■□□□□ 0.74
SKA3-204ENST00000462482 NEURL1BA8MQ27 555 aa19.67■□□□□ 0.74
SKA3-204ENST00000462482 ZNF157P51786 506 aaPredicted RBP19.67■□□□□ 0.74
SKA3-204ENST00000462482 SCARF1Q14162 830 aa19.67■□□□□ 0.74
SKA3-204ENST00000462482 DLK2Q6UY11 383 aa19.67■□□□□ 0.74
SKA3-204ENST00000462482 UBE3BQ7Z3V4 1068 aa19.67■□□□□ 0.74
SKA3-204ENST00000462482 GREM2Q9H772 168 aa19.67■□□□□ 0.74
SKA3-204ENST00000462482 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
SKA3-204ENST00000462482 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
SKA3-204ENST00000462482 ANGEL2Q5VTE6 544 aaKnown RBP19.66■□□□□ 0.74
SKA3-204ENST00000462482 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 FBXW7Q969H0 707 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 MYOZ2Q9NPC6 264 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 MINPP1Q9UNW1 487 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 TAF1P21675 1872 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 TRPM7Q96QT4 1865 aa19.66■□□□□ 0.74
SKA3-204ENST00000462482 CCDC85CA6NKD9 419 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 CCT4P50991 539 aaKnown RBP19.65■□□□□ 0.74
SKA3-204ENST00000462482 FLIIQ13045 1269 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 CDCA5Q96FF9 252 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 MPHOSPH8Q99549 860 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 ANKRD2Q9GZV1 360 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 LEMD3Q9Y2U8 911 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 MED23Q9ULK4 1368 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 COL4A1P02462 1669 aa19.65■□□□□ 0.74
SKA3-204ENST00000462482 H7C1W4 665 aa19.64■□□□□ 0.73
SKA3-204ENST00000462482 ANP32CO43423 234 aa19.64■□□□□ 0.73
SKA3-204ENST00000462482 GCKRQ14397 625 aa19.64■□□□□ 0.73
SKA3-204ENST00000462482 G2E3Q7L622 706 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms