RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RASSF7Q02833 373 aa14.7□□□□□ -0.06
CPNE1-221ENST00000462352 MPNDQ8N594 471 aa14.7□□□□□ -0.06
CPNE1-221ENST00000462352 TAOK3Q9H2K8 898 aa14.7□□□□□ -0.06
CPNE1-221ENST00000462352 CNNM1Q9NRU3 951 aa14.7□□□□□ -0.06
CPNE1-221ENST00000462352 NSFL1CQ9UNZ2 370 aaKnown RBP14.7□□□□□ -0.06
CPNE1-221ENST00000462352 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
CPNE1-221ENST00000462352 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
CPNE1-221ENST00000462352 DPP8Q6V1X1 898 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-221ENST00000462352 SSH3Q8TE77 659 aa14.69□□□□□ -0.06
CPNE1-221ENST00000462352 PSMD1Q99460 953 aa14.69□□□□□ -0.06
CPNE1-221ENST00000462352 COPRSQ9NQ92 184 aa14.69□□□□□ -0.06
CPNE1-221ENST00000462352 PA2G4Q9UQ80 394 aaKnown RBP14.69□□□□□ -0.06
CPNE1-221ENST00000462352 LTBP3Q9NS15 1303 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 IRX6P78412 446 aaPredicted RBP14.68□□□□□ -0.06
CPNE1-221ENST00000462352 CHRNDQ07001 517 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 POLA2Q14181 598 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 LRRC24Q50LG9 513 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 RPAP2Q8IXW5 612 aaPredicted RBP14.68□□□□□ -0.06
CPNE1-221ENST00000462352 RTFDC1Q9BY42 306 aaPredicted RBP14.68□□□□□ -0.06
CPNE1-221ENST00000462352 SIL1Q9H173 461 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 ANKIB1Q9P2G1 1089 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 RIPOR2Q9Y4F9 1068 aa14.68□□□□□ -0.06
CPNE1-221ENST00000462352 XDHP47989 1333 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 LTBP1Q14766 1721 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 EYA2O00167 538 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 PRELPP51888 382 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 EXOC6Q8TAG9 804 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 ANKRD2Q9GZV1 360 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 POLLQ9UGP5 575 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 FBXO3Q9UK99 471 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 DUOX1Q9NRD9 1551 aa14.67□□□□□ -0.06
CPNE1-221ENST00000462352 TAF5LO75529 589 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 CIAO1O76071 339 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 ATG9AQ7Z3C6 839 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 SIRT2Q8IXJ6 389 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 SUPT20HQ8NEM7 779 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 HELBQ8NG08 1087 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-221ENST00000462352 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 ZNF277Q9NRM2 450 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-221ENST00000462352 GGA1Q9UJY5 639 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 MROH5Q6ZUA9 1318 aa14.66□□□□□ -0.06
CPNE1-221ENST00000462352 C6orf229H3BNL8 230 aa14.65□□□□□ -0.06
CPNE1-221ENST00000462352 UFL1O94874 794 aa14.65□□□□□ -0.06
CPNE1-221ENST00000462352 LMNB1P20700 586 aa14.65□□□□□ -0.06
CPNE1-221ENST00000462352 ATP2B4P23634 1241 aa14.65□□□□□ -0.06
CPNE1-221ENST00000462352 WTIPA6NIX2 430 aaPredicted RBP14.64□□□□□ -0.07
CPNE1-221ENST00000462352 HMMRO75330 724 aa14.64□□□□□ -0.07
CPNE1-221ENST00000462352 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
CPNE1-221ENST00000462352 IARSP41252 1262 aaKnown RBP14.64□□□□□ -0.07
CPNE1-221ENST00000462352 AAMPQ13685 434 aa14.64□□□□□ -0.07
CPNE1-221ENST00000462352 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
CPNE1-221ENST00000462352 GPR101Q96P66 508 aaPredicted RBP14.64□□□□□ -0.07
CPNE1-221ENST00000462352 LEMD3Q9Y2U8 911 aa14.64□□□□□ -0.07
CPNE1-221ENST00000462352 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
CPNE1-221ENST00000462352 A0A1B0GUL6 1792 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 SNAP23O00161 211 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 SURF6O75683 361 aaKnown RBP14.63□□□□□ -0.07
CPNE1-221ENST00000462352 G3BP1Q13283 466 aaKnown RBP eCLIP14.63□□□□□ -0.07
CPNE1-221ENST00000462352 AOC3Q16853 763 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 WASHC4Q2M389 1173 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 C9orf131Q5VYM1 1079 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 VGLL2Q8N8G2 317 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 EYA3Q99504 573 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 RNF181Q9P0P0 153 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 SBF1O95248 1867 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 ZNF804BA4D1E1 1349 aa14.63□□□□□ -0.07
CPNE1-221ENST00000462352 RIMBP2O15034 1052 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 PPIP5K2O43314 1243 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 PDE8BO95263 885 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 KCNJ4P48050 445 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 KIAA2012Q0VF49 1180 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 LARGE2Q8N3Y3 721 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 VPS33BQ9H267 617 aa14.62□□□□□ -0.07
CPNE1-221ENST00000462352 NOP58Q9Y2X3 529 aaKnown RBP14.62□□□□□ -0.07
CPNE1-221ENST00000462352 MED23Q9ULK4 1368 aa14.61□□□□□ -0.07
CPNE1-221ENST00000462352 UBE4AQ14139 1066 aa14.61□□□□□ -0.07
CPNE1-221ENST00000462352 ZC3H12CQ9C0D7 883 aaKnown RBP14.61□□□□□ -0.07
CPNE1-221ENST00000462352 CEP126Q9P2H0 1117 aa14.61□□□□□ -0.07
CPNE1-221ENST00000462352 EXOC6BQ9Y2D4 811 aa14.61□□□□□ -0.07
CPNE1-221ENST00000462352 SASH1O94885 1247 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 KLRK1P26718 216 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 TFCP2Q12800 502 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 OS9Q13438 667 aaPredicted RBP14.6□□□□□ -0.07
CPNE1-221ENST00000462352 TXNRD3Q86VQ6 643 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 COL4A5P29400 1685 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 CCDC88AQ3V6T2 1871 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 IRS2Q9Y4H2 1338 aa14.6□□□□□ -0.07
CPNE1-221ENST00000462352 FGFR2P21802 821 aa14.59□□□□□ -0.07
CPNE1-221ENST00000462352 PUM3Q15397 648 aaKnown RBP14.59□□□□□ -0.07
CPNE1-221ENST00000462352 C15orf52Q6ZUT6 534 aaKnown RBP14.59□□□□□ -0.07
CPNE1-221ENST00000462352 JDP2Q8WYK2 163 aa14.59□□□□□ -0.07
CPNE1-221ENST00000462352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.59□□□□□ -0.07
CPNE1-221ENST00000462352 CHD4Q14839 1912 aa14.58□□□□□ -0.07
CPNE1-221ENST00000462352 DICER1Q9UPY3 1922 aaKnown RBP14.58□□□□□ -0.07
CPNE1-221ENST00000462352 ATP2B3Q16720 1220 aa14.58□□□□□ -0.08
CPNE1-221ENST00000462352 DOK7Q18PE1 504 aa14.58□□□□□ -0.08
CPNE1-221ENST00000462352 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
CPNE1-221ENST00000462352 NIM1KQ8IY84 436 aa14.58□□□□□ -0.08
CPNE1-221ENST00000462352 LPIN2Q92539 896 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms