RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SARM1Q6SZW1 724 aa21.69■■□□□ 1.06
HPS3-204ENST00000462030 CAVIN2O95810 425 aa21.69■■□□□ 1.06
HPS3-204ENST00000462030 CEP135Q66GS9 1140 aa21.69■■□□□ 1.06
HPS3-204ENST00000462030 CCAR1Q8IX12 1150 aaKnown RBP21.69■■□□□ 1.06
HPS3-204ENST00000462030 SIPA1L3O60292 1781 aaPredicted RBP21.68■■□□□ 1.06
HPS3-204ENST00000462030 NEURL1BA8MQ27 555 aa21.68■■□□□ 1.06
HPS3-204ENST00000462030 ATP5JP18859 108 aa21.68■■□□□ 1.06
HPS3-204ENST00000462030 STX1AQ16623 288 aa21.68■■□□□ 1.06
HPS3-204ENST00000462030 STOX1Q6ZVD7 989 aa21.68■■□□□ 1.06
HPS3-204ENST00000462030 SMARCC2Q8TAQ2 1214 aa21.68■■□□□ 1.06
HPS3-204ENST00000462030 DNAJC2Q99543 621 aaKnown RBP21.68■■□□□ 1.06
HPS3-204ENST00000462030 LAMA4Q16363 1823 aa21.68■■□□□ 1.06
HPS3-204ENST00000462030 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
HPS3-204ENST00000462030 MRFAP1L1Q96HT8 127 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 OGFRQ9NZT2 677 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 OVOS2A0A0G2JMS6 1433 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 MYL6BP14649 208 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 TFCP2Q12800 502 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 TNNI3KQ59H18 835 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 USP16Q9Y5T5 823 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 U3KPZ7 1027 aaPredicted RBP21.67■■□□□ 1.06
HPS3-204ENST00000462030 FPGT-TNNI3KV9GXZ4 949 aa21.67■■□□□ 1.06
HPS3-204ENST00000462030 GCKRQ14397 625 aa21.66■■□□□ 1.06
HPS3-204ENST00000462030 NSUN7Q8NE18 718 aaKnown RBP21.66■■□□□ 1.06
HPS3-204ENST00000462030 MYD88Q99836 296 aa21.66■■□□□ 1.06
HPS3-204ENST00000462030 SNW1Q13573 536 aaKnown RBP21.66■■□□□ 1.06
HPS3-204ENST00000462030 RCOR1Q9UKL0 485 aa21.66■■□□□ 1.06
HPS3-204ENST00000462030 CTDNEP1O95476 244 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 RBM6P78332 1123 aaKnown RBP21.65■■□□□ 1.06
HPS3-204ENST00000462030 FGD1P98174 961 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 DHX40Q8IX18 779 aaKnown RBP21.65■■□□□ 1.06
HPS3-204ENST00000462030 USP28Q96RU2 1077 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 CGNQ9P2M7 1197 aaKnown RBP21.65■■□□□ 1.06
HPS3-204ENST00000462030 C5P01031 1676 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 PHRF1Q9P1Y6 1649 aaKnown RBP21.65■■□□□ 1.06
HPS3-204ENST00000462030 PPFIA3O75145 1194 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 KIF20AO95235 890 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 SLC39A6Q13433 755 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 DDX46Q7L014 1031 aaKnown RBP21.65■■□□□ 1.06
HPS3-204ENST00000462030 FILIP1Q7Z7B0 1213 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 KCNH5Q8NCM2 988 aa21.65■■□□□ 1.06
HPS3-204ENST00000462030 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
HPS3-204ENST00000462030 PFKFB2O60825 505 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 SKILP12757 684 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 NEXNQ0ZGT2 675 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 DBNDD2Q9BQY9 259 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 COPRSQ9NQ92 184 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 PTPDC1A2A3K4 754 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 CCDC69A6NI79 296 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 BECN2A8MW95 431 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 CTAGE5O15320 804 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 RFX5P48382 616 aaPredicted RBP21.64■■□□□ 1.05
HPS3-204ENST00000462030 CCZ1BP86790 482 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 CCZ1P86791 482 aaPredicted RBP21.64■■□□□ 1.05
HPS3-204ENST00000462030 PTPN12Q05209 780 aaKnown RBP21.64■■□□□ 1.05
HPS3-204ENST00000462030 APOBRQ0VD83 1088 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 MCMDC2Q4G0Z9 681 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 THEMISQ8N1K5 641 aaPredicted RBP21.64■■□□□ 1.05
HPS3-204ENST00000462030 XAGE3Q8WTP9 111 aa21.64■■□□□ 1.05
HPS3-204ENST00000462030 NAA16Q6N069 864 aaPredicted RBP21.63■■□□□ 1.05
HPS3-204ENST00000462030 CCDC73Q6ZRK6 1079 aa21.63■■□□□ 1.05
HPS3-204ENST00000462030 NYAP1Q6ZVC0 841 aa21.63■■□□□ 1.05
HPS3-204ENST00000462030 DDX41Q9UJV9 622 aaKnown RBP21.63■■□□□ 1.05
HPS3-204ENST00000462030 PSME1Q06323 249 aa21.63■■□□□ 1.05
HPS3-204ENST00000462030 SLFNL1Q499Z3 407 aa21.63■■□□□ 1.05
HPS3-204ENST00000462030 FBXW7Q969H0 707 aa21.63■■□□□ 1.05
HPS3-204ENST00000462030 LLPHQ9BRT6 129 aaKnown RBP21.63■■□□□ 1.05
HPS3-204ENST00000462030 TRMT1Q9NXH9 659 aaKnown RBP21.63■■□□□ 1.05
HPS3-204ENST00000462030 NEMFO60524 1076 aa21.62■■□□□ 1.05
HPS3-204ENST00000462030 CCT2P78371 535 aaKnown RBP21.62■■□□□ 1.05
HPS3-204ENST00000462030 PTPN14Q15678 1187 aa21.62■■□□□ 1.05
HPS3-204ENST00000462030 COPS6Q7L5N1 327 aa21.62■■□□□ 1.05
HPS3-204ENST00000462030 ENGASEQ8NFI3 743 aa21.62■■□□□ 1.05
HPS3-204ENST00000462030 ANKRD24Q8TF21 1146 aa21.62■■□□□ 1.05
HPS3-204ENST00000462030 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.62■■□□□ 1.05
HPS3-204ENST00000462030 ZNF215Q9UL58 517 aaPredicted RBP21.62■■□□□ 1.05
HPS3-204ENST00000462030 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
HPS3-204ENST00000462030 V9GYY5 206 aaPredicted RBP21.62■■□□□ 1.05
HPS3-204ENST00000462030 KINO60870 393 aaKnown RBP21.62■■□□□ 1.05
HPS3-204ENST00000462030 GUCY1B3Q02153 619 aa21.62■■□□□ 1.05
HPS3-204ENST00000462030 METTL22Q9BUU2 404 aaPredicted RBP21.61■■□□□ 1.05
HPS3-204ENST00000462030 NCOA5Q9HCD5 579 aaKnown RBP21.61■■□□□ 1.05
HPS3-204ENST00000462030 RFX7Q2KHR2 1363 aa21.61■■□□□ 1.05
HPS3-204ENST00000462030 A0A0G2JLW4 131 aa21.61■■□□□ 1.05
HPS3-204ENST00000462030 AOPEPQ8N6M6 819 aa21.61■■□□□ 1.05
HPS3-204ENST00000462030 FSIP1Q8NA03 581 aa21.61■■□□□ 1.05
HPS3-204ENST00000462030 HAUS7Q99871 368 aa21.61■■□□□ 1.05
HPS3-204ENST00000462030 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
HPS3-204ENST00000462030 FAM160A1Q05DH4 1040 aa21.6■■□□□ 1.05
HPS3-204ENST00000462030 ESCO1Q5FWF5 840 aa21.6■■□□□ 1.05
HPS3-204ENST00000462030 DHX32Q7L7V1 743 aaKnown RBP21.6■■□□□ 1.05
HPS3-204ENST00000462030 ILDR1Q86SU0 546 aaPredicted RBP21.6■■□□□ 1.05
HPS3-204ENST00000462030 ANO10Q9NW15 660 aa21.6■■□□□ 1.05
HPS3-204ENST00000462030 ARHGEF25Q86VW2 580 aa21.6■■□□□ 1.05
HPS3-204ENST00000462030 KIF18AQ8NI77 898 aa21.6■■□□□ 1.05
HPS3-204ENST00000462030 ME1P48163 572 aa21.59■■□□□ 1.05
HPS3-204ENST00000462030 GCP02774 474 aa21.58■■□□□ 1.05
HPS3-204ENST00000462030 ZNF790Q6PG37 636 aa21.58■■□□□ 1.05
HPS3-204ENST00000462030 CCAR2Q8N163 923 aaKnown RBP21.58■■□□□ 1.05
HPS3-204ENST00000462030 NAP1L2Q9ULW6 460 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms