RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	IL1RAPL2	Q9NP60	686 aa		18.97	■□□□□ 0.63
C1S-209	ENST00000461983	STAP2	Q9UGK3	403 aa		18.97	■□□□□ 0.63
C1S-209	ENST00000461983	FPGT-TNNI3K	V9GXZ4	949 aa		18.97	■□□□□ 0.63
C1S-209	ENST00000461983	SMARCA5	O60264	1052 aa	Predicted RBP	18.96	■□□□□ 0.63
C1S-209	ENST00000461983	ZBTB7A	O95365	584 aa		18.96	■□□□□ 0.63
C1S-209	ENST00000461983	MX1	P20591	662 aa		18.96	■□□□□ 0.63
C1S-209	ENST00000461983	PUM3	Q15397	648 aa	Known RBP	18.96	■□□□□ 0.63
C1S-209	ENST00000461983	GRIPAP1	Q4V328	841 aa		18.96	■□□□□ 0.63
C1S-209	ENST00000461983	C2CD5	Q86YS7	1000 aa		18.96	■□□□□ 0.63
C1S-209	ENST00000461983	CCDC24	Q8N4L8	307 aa		18.96	■□□□□ 0.63
C1S-209	ENST00000461983	IFIT1	P09914	478 aa	Known RBP	18.95	■□□□□ 0.62
C1S-209	ENST00000461983	TGFB2	P61812	414 aa		18.95	■□□□□ 0.62
C1S-209	ENST00000461983	LPIN2	Q92539	896 aa		18.95	■□□□□ 0.62
C1S-209	ENST00000461983	PUS3	Q9BZE2	481 aa	Known RBP	18.95	■□□□□ 0.62
C1S-209	ENST00000461983	ECHDC1	Q9NTX5	307 aa		18.95	■□□□□ 0.62
C1S-209	ENST00000461983	SLC5A1	P13866	664 aa		18.94	■□□□□ 0.62
C1S-209	ENST00000461983	PDE1A	P54750	535 aa		18.94	■□□□□ 0.62
C1S-209	ENST00000461983	UBE4A	Q14139	1066 aa		18.94	■□□□□ 0.62
C1S-209	ENST00000461983	GORAB	Q5T7V8	394 aa		18.94	■□□□□ 0.62
C1S-209	ENST00000461983	PLEKHM2	Q8IWE5	1019 aa		18.94	■□□□□ 0.62
C1S-209	ENST00000461983	CELF1	Q92879	486 aa	Known RBP	18.94	■□□□□ 0.62
C1S-209	ENST00000461983	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.94	■□□□□ 0.62
C1S-209	ENST00000461983	SPON1	Q9HCB6	807 aa		18.94	■□□□□ 0.62
C1S-209	ENST00000461983	GLRX3	O76003	335 aa	Known RBP	18.93	■□□□□ 0.62
C1S-209	ENST00000461983	PDE4A	P27815	886 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	ATP2B3	Q16720	1220 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	CCDC158	Q5M9N0	1113 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	CC2D2B	Q6DHV5	1058 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	SP8	Q8IXZ3	490 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	EAF2	Q96CJ1	260 aa	Predicted RBP	18.93	■□□□□ 0.62
C1S-209	ENST00000461983	NEUROD6	Q96NK8	337 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	MINPP1	Q9UNW1	487 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.93	■□□□□ 0.62
C1S-209	ENST00000461983	CD2AP	Q9Y5K6	639 aa		18.93	■□□□□ 0.62
C1S-209	ENST00000461983	KCNJ4	P48050	445 aa		18.92	■□□□□ 0.62
C1S-209	ENST00000461983	CHRND	Q07001	517 aa		18.92	■□□□□ 0.62
C1S-209	ENST00000461983	BMP2KL	Q5H9B9	411 aa		18.92	■□□□□ 0.62
C1S-209	ENST00000461983	LEMD3	Q9Y2U8	911 aa		18.92	■□□□□ 0.62
C1S-209	ENST00000461983	C10orf71	Q711Q0	1435 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983	CASZ1	Q86V15	1759 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983		A0A1B0GUL7	405 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983	TICAM2	Q86XR7	235 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.91	■□□□□ 0.62
C1S-209	ENST00000461983	VGLL2	Q8N8G2	317 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
C1S-209	ENST00000461983	BCL11A	Q9H165	835 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983	LRP5	O75197	1615 aa		18.91	■□□□□ 0.62
C1S-209	ENST00000461983	PSD	A5PKW4	1024 aa	Predicted RBP	18.9	■□□□□ 0.62
C1S-209	ENST00000461983	PPEF1	O14829	653 aa	Predicted RBP	18.9	■□□□□ 0.62
C1S-209	ENST00000461983	ANKIB1	Q9P2G1	1089 aa		18.9	■□□□□ 0.62
C1S-209	ENST00000461983	ATP6V0A2	Q9Y487	856 aa		18.9	■□□□□ 0.62
C1S-209	ENST00000461983	XDH	P47989	1333 aa		18.9	■□□□□ 0.62
C1S-209	ENST00000461983	SALL3	Q9BXA9	1300 aa		18.9	■□□□□ 0.62
C1S-209	ENST00000461983	UQCRFS1P1	P0C7P4	283 aa		18.89	■□□□□ 0.61
C1S-209	ENST00000461983	ATP5J	P18859	108 aa		18.89	■□□□□ 0.61
C1S-209	ENST00000461983	ATP2B4	P23634	1241 aa		18.89	■□□□□ 0.61
C1S-209	ENST00000461983	CAVIN4	Q5BKX8	364 aa		18.89	■□□□□ 0.61
C1S-209	ENST00000461983	SOGA3	Q5TF21	947 aa		18.89	■□□□□ 0.61
C1S-209	ENST00000461983	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
C1S-209	ENST00000461983	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.89	■□□□□ 0.61
C1S-209	ENST00000461983	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.89	■□□□□ 0.61
C1S-209	ENST00000461983	GNL3L	Q9NVN8	582 aa	Known RBP	18.89	■□□□□ 0.61
C1S-209	ENST00000461983	FGFR2	P21802	821 aa		18.88	■□□□□ 0.61
C1S-209	ENST00000461983	TIMM10	P62072	90 aa		18.88	■□□□□ 0.61
C1S-209	ENST00000461983	TTC22	Q5TAA0	569 aa		18.88	■□□□□ 0.61
C1S-209	ENST00000461983	PODXL2	Q9NZ53	605 aa		18.88	■□□□□ 0.61
C1S-209	ENST00000461983	ZNF609	O15014	1411 aa		18.88	■□□□□ 0.61
C1S-209	ENST00000461983	CASC1	Q6TDU7	716 aa		18.87	■□□□□ 0.61
C1S-209	ENST00000461983	TTLL6	Q8N841	843 aa		18.87	■□□□□ 0.61
C1S-209	ENST00000461983	XAGE2	Q96GT9	111 aa		18.87	■□□□□ 0.61
C1S-209	ENST00000461983	SGIP1	Q9BQI5	828 aa		18.87	■□□□□ 0.61
C1S-209	ENST00000461983	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.87	■□□□□ 0.61
C1S-209	ENST00000461983	DBNL	Q9UJU6	430 aa	Known RBP	18.87	■□□□□ 0.61
C1S-209	ENST00000461983	ZBTB22	O15209	634 aa		18.86	■□□□□ 0.61
C1S-209	ENST00000461983	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.86	■□□□□ 0.61
C1S-209	ENST00000461983	TTC39A	Q5SRH9	613 aa		18.86	■□□□□ 0.61
C1S-209	ENST00000461983	PIM2	Q9P1W9	311 aa		18.86	■□□□□ 0.61
C1S-209	ENST00000461983	GGA1	Q9UJY5	639 aa		18.86	■□□□□ 0.61
C1S-209	ENST00000461983	ZNF804B	A4D1E1	1349 aa		18.85	■□□□□ 0.61
C1S-209	ENST00000461983	C15orf52	Q6ZUT6	534 aa	Known RBP	18.85	■□□□□ 0.61
C1S-209	ENST00000461983	VPS37D	Q86XT2	251 aa		18.85	■□□□□ 0.61
C1S-209	ENST00000461983	CNTROB	Q8N137	903 aa		18.85	■□□□□ 0.61
C1S-209	ENST00000461983	HELB	Q8NG08	1087 aa	Predicted RBP	18.85	■□□□□ 0.61
C1S-209	ENST00000461983	DBNDD2	Q9BQY9	259 aa		18.85	■□□□□ 0.61
C1S-209	ENST00000461983	TAF5L	O75529	589 aa		18.84	■□□□□ 0.61
C1S-209	ENST00000461983	PTGER2	P43116	358 aa		18.84	■□□□□ 0.61
C1S-209	ENST00000461983	PRPF40B	Q6NWY9	871 aa	Known RBP	18.84	■□□□□ 0.61
C1S-209	ENST00000461983	SUPT20H	Q8NEM7	779 aa		18.84	■□□□□ 0.61
C1S-209	ENST00000461983	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.84	■□□□□ 0.61
C1S-209	ENST00000461983	EYA3	Q99504	573 aa		18.84	■□□□□ 0.61
C1S-209	ENST00000461983	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.84	■□□□□ 0.61
C1S-209	ENST00000461983	HIP1	O00291	1037 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	SEMA3E	O15041	775 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	IGSF3	O75054	1194 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	RTKN2	Q8IZC4	609 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	MPND	Q8N594	471 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	PI4K2B	Q8TCG2	481 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	EVI5L	Q96CN4	794 aa		18.83	■□□□□ 0.6
C1S-209	ENST00000461983	ANKRD31	Q8N7Z5	1873 aa		18.82	■□□□□ 0.6
C1S-209	ENST00000461983	TRIM6-TRIM34	B2RNG4	842 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms