RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 DUOX1Q9NRD9 1551 aa14.06□□□□□ -0.16
SSBP1-202ENST00000461433 LRRC24Q50LG9 513 aa14.06□□□□□ -0.16
SSBP1-202ENST00000461433 CC2D2BQ6DHV5 1058 aa14.06□□□□□ -0.16
SSBP1-202ENST00000461433 LDHAL6AQ6ZMR3 332 aa14.06□□□□□ -0.16
SSBP1-202ENST00000461433 RPAP2Q8IXW5 612 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-202ENST00000461433 MPHOSPH8Q99549 860 aa14.06□□□□□ -0.16
SSBP1-202ENST00000461433 PCDHB15Q9Y5E8 787 aa14.06□□□□□ -0.16
SSBP1-202ENST00000461433 SBF1O95248 1867 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 NFKBIEO00221 500 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 GPSM2P81274 684 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 CCDC93Q567U6 631 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 ATG9AQ7Z3C6 839 aa14.05□□□□□ -0.16
SSBP1-202ENST00000461433 WTIPA6NIX2 430 aaPredicted RBP14.04□□□□□ -0.16
SSBP1-202ENST00000461433 GRIN3BO60391 1043 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 PRELPP51888 382 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 RTKN2Q8IZC4 609 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 PODXL2Q9NZ53 605 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 EYA2O00167 538 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 CHRNDQ07001 517 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 MPNDQ8N594 471 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
SSBP1-202ENST00000461433 SIL1Q9H173 461 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 CNNM1Q9NRU3 951 aa14.04□□□□□ -0.16
SSBP1-202ENST00000461433 CIAO1O76071 339 aa14.03□□□□□ -0.16
SSBP1-202ENST00000461433 AAMPQ13685 434 aa14.03□□□□□ -0.16
SSBP1-202ENST00000461433 HELBQ8NG08 1087 aaPredicted RBP14.03□□□□□ -0.16
SSBP1-202ENST00000461433 PSMD1Q99460 953 aa14.03□□□□□ -0.16
SSBP1-202ENST00000461433 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
SSBP1-202ENST00000461433 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
SSBP1-202ENST00000461433 NSFL1CQ9UNZ2 370 aaKnown RBP14.03□□□□□ -0.16
SSBP1-202ENST00000461433 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
SSBP1-202ENST00000461433 LTBP3Q9NS15 1303 aa14.03□□□□□ -0.16
SSBP1-202ENST00000461433 FKBP4Q02790 459 aaKnown RBP eCLIP14.02□□□□□ -0.16
SSBP1-202ENST00000461433 RASSF7Q02833 373 aa14.02□□□□□ -0.16
SSBP1-202ENST00000461433 DPP8Q6V1X1 898 aaPredicted RBP14.02□□□□□ -0.16
SSBP1-202ENST00000461433 VGLL2Q8N8G2 317 aa14.02□□□□□ -0.16
SSBP1-202ENST00000461433 TMX4Q9H1E5 349 aaPredicted RBP14.02□□□□□ -0.16
SSBP1-202ENST00000461433 TAF5LO75529 589 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 TBC1D16Q8TBP0 767 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 TAOK3Q9H2K8 898 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 ANKIB1Q9P2G1 1089 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.01□□□□□ -0.17
SSBP1-202ENST00000461433 XDHP47989 1333 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 MROH5Q6ZUA9 1318 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 SNAP23O00161 211 aa14.01□□□□□ -0.17
SSBP1-202ENST00000461433 DICER1Q9UPY3 1922 aaKnown RBP14□□□□□ -0.17
SSBP1-202ENST00000461433 COL4A5P29400 1685 aa14□□□□□ -0.17
SSBP1-202ENST00000461433 SURF6O75683 361 aaKnown RBP14□□□□□ -0.17
SSBP1-202ENST00000461433 SASH1O94885 1247 aa14□□□□□ -0.17
SSBP1-202ENST00000461433 IL15P40933 162 aaPredicted RBP14□□□□□ -0.17
SSBP1-202ENST00000461433 GPR101Q96P66 508 aaPredicted RBP14□□□□□ -0.17
SSBP1-202ENST00000461433 ZNF277Q9NRM2 450 aaPredicted RBP14□□□□□ -0.17
SSBP1-202ENST00000461433 IRS2Q9Y4H2 1338 aa14□□□□□ -0.17
SSBP1-202ENST00000461433 HMMRO75330 724 aa13.99□□□□□ -0.17
SSBP1-202ENST00000461433 PDE8BO95263 885 aa13.99□□□□□ -0.17
SSBP1-202ENST00000461433 ATP2B4P23634 1241 aa13.99□□□□□ -0.17
SSBP1-202ENST00000461433 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
SSBP1-202ENST00000461433 GGA1Q9UJY5 639 aa13.99□□□□□ -0.17
SSBP1-202ENST00000461433 LEMD3Q9Y2U8 911 aa13.99□□□□□ -0.17
SSBP1-202ENST00000461433 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 C6orf229H3BNL8 230 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 UFL1O94874 794 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 EXOC6BQ9Y2D4 811 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 ZNF804BA4D1E1 1349 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 LMNB1P20700 586 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 FGFR2P21802 821 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 KLRK1P26718 216 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
SSBP1-202ENST00000461433 TFCP2Q12800 502 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 G3BP1Q13283 466 aaKnown RBP eCLIP13.98□□□□□ -0.17
SSBP1-202ENST00000461433 CHD4Q14839 1912 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 TXNRD3Q86VQ6 643 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 SUPT20HQ8NEM7 779 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 DCTPP1Q9H773 170 aa13.98□□□□□ -0.17
SSBP1-202ENST00000461433 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
SSBP1-202ENST00000461433 HDAC1Q13547 482 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-202ENST00000461433 UBE4AQ14139 1066 aa13.97□□□□□ -0.17
SSBP1-202ENST00000461433 AOC3Q16853 763 aa13.97□□□□□ -0.17
SSBP1-202ENST00000461433 WASHC4Q2M389 1173 aa13.97□□□□□ -0.17
SSBP1-202ENST00000461433 VPS33BQ9H267 617 aa13.97□□□□□ -0.17
SSBP1-202ENST00000461433 CEP126Q9P2H0 1117 aa13.97□□□□□ -0.17
SSBP1-202ENST00000461433 IGHDP01880 384 aa13.96□□□□□ -0.17
SSBP1-202ENST00000461433 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.17
SSBP1-202ENST00000461433 MED23Q9ULK4 1368 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 ARAP2Q8WZ64 1704 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 RIMBP2O15034 1052 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 PPIP5K2O43314 1243 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 KCNJ4P48050 445 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-202ENST00000461433 PUM3Q15397 648 aaKnown RBP13.95□□□□□ -0.18
SSBP1-202ENST00000461433 EYA3Q99504 573 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms