RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 GPRC5DQ9NZD1 345 aa19.52■□□□□ 0.72
VARS-219ENST00000461328 GGA1Q9UJY5 639 aa19.52■□□□□ 0.72
VARS-219ENST00000461328 ADAMTSL1Q8N6G6 1762 aa19.52■□□□□ 0.71
VARS-219ENST00000461328 MYH3P11055 1940 aa19.51■□□□□ 0.71
VARS-219ENST00000461328 YDJCA8MPS7 323 aa19.51■□□□□ 0.71
VARS-219ENST00000461328 MAP1SQ66K74 1059 aaPredicted RBP19.51■□□□□ 0.71
VARS-219ENST00000461328 SSH1Q8WYL5 1049 aa19.51■□□□□ 0.71
VARS-219ENST00000461328 ADARB2Q9NS39 739 aaKnown RBP19.51■□□□□ 0.71
VARS-219ENST00000461328 SMC4Q9NTJ3 1288 aa19.51■□□□□ 0.71
VARS-219ENST00000461328 RTL9Q8NET4 1388 aa19.51■□□□□ 0.71
VARS-219ENST00000461328 G3V3G9 751 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 CASP7P55210 303 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 DOK7Q18PE1 504 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 BEND3Q5T5X7 828 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 DCAF8Q5TAQ9 597 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 USP50Q70EL3 339 aaPredicted RBP19.5■□□□□ 0.71
VARS-219ENST00000461328 CNTROBQ8N137 903 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 MRPL50Q8N5N7 158 aaKnown RBP19.5■□□□□ 0.71
VARS-219ENST00000461328 PLA2G12BQ9BX93 195 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 XDHP47989 1333 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 PASKQ96RG2 1323 aa19.5■□□□□ 0.71
VARS-219ENST00000461328 ECE2O60344 883 aa19.49■□□□□ 0.71
VARS-219ENST00000461328 ITGBL1O95965 494 aaPredicted RBP19.49■□□□□ 0.71
VARS-219ENST00000461328 CREBZFQ9NS37 354 aa19.49■□□□□ 0.71
VARS-219ENST00000461328 IGHMBP2P38935 993 aaKnown RBP19.48■□□□□ 0.71
VARS-219ENST00000461328 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
VARS-219ENST00000461328 TRMT2AQ8IZ69 625 aaKnown RBP19.48■□□□□ 0.71
VARS-219ENST00000461328 SRCIN1Q9C0H9 1055 aa19.48■□□□□ 0.71
VARS-219ENST00000461328 BSDC1Q9NW68 430 aaPredicted RBP19.48■□□□□ 0.71
VARS-219ENST00000461328 PTPRCP08575 1304 aa19.48■□□□□ 0.71
VARS-219ENST00000461328 CT47B1P0C2W7 299 aaPredicted RBP19.47■□□□□ 0.71
VARS-219ENST00000461328 ITGA6P23229 1130 aa19.47■□□□□ 0.71
VARS-219ENST00000461328 ATP2B4P23634 1241 aa19.47■□□□□ 0.71
VARS-219ENST00000461328 ALDH1L2Q3SY69 923 aa19.47■□□□□ 0.71
VARS-219ENST00000461328 C9orf78Q9NZ63 289 aaPredicted RBP19.47■□□□□ 0.71
VARS-219ENST00000461328 SPEF2Q9C093 1822 aa19.46■□□□□ 0.71
VARS-219ENST00000461328 PSMD14O00487 310 aa19.46■□□□□ 0.71
VARS-219ENST00000461328 ALDH1L1O75891 902 aa19.46■□□□□ 0.71
VARS-219ENST00000461328 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
VARS-219ENST00000461328 ZBTB12Q9Y330 459 aaPredicted RBP19.46■□□□□ 0.71
VARS-219ENST00000461328 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
VARS-219ENST00000461328 TMEM88BA6NKF7 163 aa19.45■□□□□ 0.7
VARS-219ENST00000461328 GRM8O00222 908 aa19.45■□□□□ 0.7
VARS-219ENST00000461328 CSF1RP07333 972 aa19.45■□□□□ 0.7
VARS-219ENST00000461328 JMYQ8N9B5 988 aa19.45■□□□□ 0.7
VARS-219ENST00000461328 MPHOSPH8Q99549 860 aa19.45■□□□□ 0.7
VARS-219ENST00000461328 CNOT7Q9UIV1 285 aaKnown RBP19.45■□□□□ 0.7
VARS-219ENST00000461328 ANKRD18BA2A2Z9 1011 aa19.44■□□□□ 0.7
VARS-219ENST00000461328 H7C1D1 291 aa19.44■□□□□ 0.7
VARS-219ENST00000461328 MICALL2Q8IY33 904 aa19.44■□□□□ 0.7
VARS-219ENST00000461328 KCNQ5Q9NR82 932 aa19.44■□□□□ 0.7
VARS-219ENST00000461328 RPS12P25398 132 aaKnown RBP19.43■□□□□ 0.7
VARS-219ENST00000461328 FOXO4P98177 505 aa19.43■□□□□ 0.7
VARS-219ENST00000461328 DPF2Q92785 391 aa19.43■□□□□ 0.7
VARS-219ENST00000461328 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
VARS-219ENST00000461328 SHTN1A0MZ66 631 aa19.42■□□□□ 0.7
VARS-219ENST00000461328 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
VARS-219ENST00000461328 IFIT5Q13325 482 aaKnown RBP19.42■□□□□ 0.7
VARS-219ENST00000461328 ANKRD2Q9GZV1 360 aa19.42■□□□□ 0.7
VARS-219ENST00000461328 TRPM4Q8TD43 1214 aa19.41■□□□□ 0.7
VARS-219ENST00000461328 MED23Q9ULK4 1368 aa19.41■□□□□ 0.7
VARS-219ENST00000461328 WTIPA6NIX2 430 aaPredicted RBP19.4■□□□□ 0.7
VARS-219ENST00000461328 VIL1P09327 827 aaKnown RBP19.4■□□□□ 0.7
VARS-219ENST00000461328 LMBR1LQ6UX01 489 aa19.4■□□□□ 0.7
VARS-219ENST00000461328 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
VARS-219ENST00000461328 LEMD3Q9Y2U8 911 aa19.4■□□□□ 0.7
VARS-219ENST00000461328 TRAF5O00463 557 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 KCNJ4P48050 445 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 HIRAP54198 1017 aaPredicted RBP19.39■□□□□ 0.69
VARS-219ENST00000461328 CCDC57Q2TAC2 916 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 TAF7LQ5H9L4 462 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 EPHA10Q5JZY3 1008 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 SAMD7Q7Z3H4 446 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 PODNQ7Z5L7 613 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 NOB1Q9ULX3 412 aaKnown RBP19.39■□□□□ 0.69
VARS-219ENST00000461328 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 CNTNAP1P78357 1384 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 SCN9AQ15858 1988 aa19.39■□□□□ 0.69
VARS-219ENST00000461328 ZNF804BA4D1E1 1349 aa19.38■□□□□ 0.69
VARS-219ENST00000461328 RARSP54136 660 aaKnown RBP19.38■□□□□ 0.69
VARS-219ENST00000461328 FMR1Q06787 632 aaKnown RBP eCLIP19.38■□□□□ 0.698e-8■■■□□ 18.4
VARS-219ENST00000461328 CHRNDQ07001 517 aa19.38■□□□□ 0.69
VARS-219ENST00000461328 TBC1D10BQ4KMP7 808 aaPredicted RBP19.38■□□□□ 0.69
VARS-219ENST00000461328 RBM26Q5T8P6 1007 aaKnown RBP19.38■□□□□ 0.69
VARS-219ENST00000461328 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
VARS-219ENST00000461328 PGAP2Q9UHJ9 254 aa19.38■□□□□ 0.69
VARS-219ENST00000461328 ABT1Q9ULW3 272 aaKnown RBP19.38■□□□□ 0.69
VARS-219ENST00000461328 ZBED9Q6R2W3 1325 aa19.37■□□□□ 0.69
VARS-219ENST00000461328 USP17L3A6NCW0 530 aa19.37■□□□□ 0.69
VARS-219ENST00000461328 USP17L4A6NCW7 530 aa19.37■□□□□ 0.69
VARS-219ENST00000461328 RSBN1LQ6PCB5 846 aaPredicted RBP19.37■□□□□ 0.69
VARS-219ENST00000461328 USP17L1Q7RTZ2 530 aa19.37■□□□□ 0.69
VARS-219ENST00000461328 SUCLG2Q96I99 432 aa19.37■□□□□ 0.69
VARS-219ENST00000461328 GLIS2Q9BZE0 524 aaPredicted RBP19.37■□□□□ 0.69
VARS-219ENST00000461328 NBPF7P0C2Y1 421 aaPredicted RBP19.36■□□□□ 0.69
VARS-219ENST00000461328 COA1Q9GZY4 146 aa19.36■□□□□ 0.69
VARS-219ENST00000461328 EGFRP00533 1210 aa19.35■□□□□ 0.69
VARS-219ENST00000461328 KIF4BQ2VIQ3 1234 aa19.35■□□□□ 0.69
VARS-219ENST00000461328 CDC37L1Q7L3B6 337 aa19.35■□□□□ 0.69
VARS-219ENST00000461328 AGBL3Q8NEM8 1001 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms