RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 MRPS27Q92552 414 aaKnown RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 STMN2Q93045 179 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 C9orf84Q5VXU9 1444 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 TNNC1P63316 161 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 PLCB3Q01970 1234 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 ZSCAN23Q3MJ62 389 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 NUDT16Q96DE0 195 aaKnown RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 SEC62Q99442 399 aaKnown RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 CLGNO14967 610 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 TRMT1LQ7Z2T5 733 aaKnown RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 PPP1R42Q7Z4L9 355 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 ZGPATQ8N5A5 531 aaKnown RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC114Q96M63 670 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 MIS18AQ9NYP9 233 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 MTUS1Q9ULD2 1270 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 ANKRD24Q8TF21 1146 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 CCT6BQ92526 530 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 GJC1P36383 396 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 ASIC1P78348 528 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC117Q8IWD4 279 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 FAM200AQ8TCP9 573 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-205ENST00000461221 SSH1Q8WYL5 1049 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 TSGA10Q9BZW7 698 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 GDPD2Q9HCC8 539 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 FAM184BQ9ULE4 1060 aa10.19□□□□□ -0.78
BRCA1-205ENST00000461221 ZBTB43O43298 467 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 TSPY3P0CV98 308 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 TSPY8P0CW00 308 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 AFMP43652 599 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 VAV2P52735 878 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 BMP2KLQ5H9B9 411 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 INTS8Q75QN2 995 aaKnown RBP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 MIPOL1Q8TD10 442 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 IFT74Q96LB3 600 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 ATP6V0A2Q9Y487 856 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 ERICH3Q5RHP9 1530 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 HMGB1P1B2RPK0 211 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 CALCOCO2Q13137 446 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 NEK11Q8NG66 645 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 C6orf50Q9HD87 102 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 TMEM110-MUSTN1A8MSY1 372 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 NOLC1Q14978 699 aaKnown RBP eCLIP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 ANO6Q4KMQ2 910 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 ESR2Q92731 530 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC42Q96M95 316 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 CASQ2O14958 399 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 RTN1Q16799 776 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 IFIT1BQ5T764 474 aaKnown RBP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 CACNA2D3Q8IZS8 1091 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 CEP120Q8N960 986 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 ALG1Q9BT22 464 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 ARID4AP29374 1257 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-205ENST00000461221 PPP1R7Q15435 360 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 LDHAL6AQ6ZMR3 332 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 CSRNP2Q9H175 543 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 NKIRAS1Q9NYS0 192 aa10.18□□□□□ -0.78
BRCA1-205ENST00000461221 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 SYT1P21579 422 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 VCX3BQ9H321 246 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 KCNK9Q9NPC2 374 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 FEZ2Q9UHY8 353 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-205ENST00000461221 LUC7L2Q9Y383 392 aaKnown RBP10.17□□□□□ -0.78
BRCA1-205ENST00000461221 HCLS1P14317 486 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-205ENST00000461221 SEL1L2Q5TEA6 688 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 PIK3R4Q99570 1358 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
BRCA1-205ENST00000461221 CRCPO75575 148 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 CALM1P0DP23 149 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 CALM2P0DP24 149 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 CALM3P0DP25 149 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 ATP11AP98196 1134 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 TBC1D9Q6ZT07 1266 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 SMARCC2Q8TAQ2 1214 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 FAM76AQ8TAV0 307 aa10.17□□□□□ -0.78
BRCA1-205ENST00000461221 FGD5Q6ZNL6 1462 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 HAND2P61296 217 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 CLUL1Q15846 466 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 INF2Q27J81 1249 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 GIMAP6Q6P9H5 292 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 HS2ST1Q7LGA3 356 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 VPS52Q8N1B4 723 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 HDAC9Q9UKV0 1011 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 EHBP1L1Q8N3D4 1523 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 RTL9Q8NET4 1388 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 TTC22Q5TAA0 569 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 FYB2Q5VWT5 728 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 AFAP1L2Q8N4X5 818 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 GABPB2Q8TAK5 448 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-205ENST00000461221 PRPF31Q8WWY3 499 aaKnown RBP10.16□□□□□ -0.78
BRCA1-205ENST00000461221 MAK16Q9BXY0 300 aaKnown RBP10.16□□□□□ -0.78
BRCA1-205ENST00000461221 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-205ENST00000461221 PTGS1P23219 599 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 ST5P78524 1137 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms