RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 LINS1Q8NG48 757 aa9.51□□□□□ -0.89
PTPN18-206ENST00000460992 CNKSR1Q969H4 720 aa9.51□□□□□ -0.89
PTPN18-206ENST00000460992 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
PTPN18-206ENST00000460992 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
PTPN18-206ENST00000460992 MRE11P49959 708 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 CTSWP56202 376 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 GCKRQ14397 625 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 TNNQ9UQP3 1299 aa9.5□□□□□ -0.89
PTPN18-206ENST00000460992 ZNF646O15015 1829 aaPredicted RBP9.49□□□□□ -0.89
PTPN18-206ENST00000460992 YY1P25490 414 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 PRELPP51888 382 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 MFAP1P55081 439 aaKnown RBP9.49□□□□□ -0.89
PTPN18-206ENST00000460992 CASP7P55210 303 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 SLC10A5Q5PT55 438 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 CASC1Q6TDU7 716 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 ARHGAP27Q6ZUM4 889 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 RPAP2Q8IXW5 612 aaPredicted RBP9.49□□□□□ -0.89
PTPN18-206ENST00000460992 CELF1Q92879 486 aaKnown RBP9.49□□□□□ -0.89
PTPN18-206ENST00000460992 RBM17Q96I25 401 aaKnown RBP9.49□□□□□ -0.89
PTPN18-206ENST00000460992 SLKQ9H2G2 1235 aaPredicted RBP9.49□□□□□ -0.89
PTPN18-206ENST00000460992 TAOK3Q9H2K8 898 aa9.49□□□□□ -0.89
PTPN18-206ENST00000460992 PSME4Q14997 1843 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 FSD2A1L4K1 749 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 GRM8O00222 908 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
PTPN18-206ENST00000460992 GRAPQ13588 217 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 CLEC17AQ6ZS10 378 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 GRAPLQ8TC17 118 aaPredicted RBP9.48□□□□□ -0.89
PTPN18-206ENST00000460992 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 RTL9Q8NET4 1388 aa9.48□□□□□ -0.89
PTPN18-206ENST00000460992 PDE8AO60658 829 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 CDC45O75419 566 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 DDIT3P35638 169 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
PTPN18-206ENST00000460992 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
PTPN18-206ENST00000460992 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
PTPN18-206ENST00000460992 C7orf43Q8WVR3 580 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 GREM2Q9H772 168 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 RNF181Q9P0P0 153 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 LTBP3Q9NS15 1303 aa9.47□□□□□ -0.89
PTPN18-206ENST00000460992 SCN9AQ15858 1988 aa9.46□□□□□ -0.89
PTPN18-206ENST00000460992 ARAP2Q8WZ64 1704 aa9.46□□□□□ -0.89
PTPN18-206ENST00000460992 WDR90Q96KV7 1748 aa9.46□□□□□ -0.89
PTPN18-206ENST00000460992 H7C1W4 665 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 EPB41L2O43491 1005 aaKnown RBP9.46□□□□□ -0.9
PTPN18-206ENST00000460992 TRAK2O60296 914 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 ALDH1L1O75891 902 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 NBPF7P0C2Y1 421 aaPredicted RBP9.46□□□□□ -0.9
PTPN18-206ENST00000460992 ALDH1B1P30837 517 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 RABEP1Q15276 862 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 EPHA10Q5JZY3 1008 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 SOGA3Q5TF21 947 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 C9orf131Q5VYM1 1079 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 SUCLG2Q96I99 432 aa9.46□□□□□ -0.9
PTPN18-206ENST00000460992 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.9
PTPN18-206ENST00000460992 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
PTPN18-206ENST00000460992 HMMRO75330 724 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 NUCB2P80303 420 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 FKBP4Q02790 459 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPN18-206ENST00000460992 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 ZNF526Q8TF50 670 aaPredicted RBP9.45□□□□□ -0.9
PTPN18-206ENST00000460992 PLA2G12BQ9BX93 195 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 DCTPP1Q9H773 170 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 ZNF277Q9NRM2 450 aaPredicted RBP9.45□□□□□ -0.9
PTPN18-206ENST00000460992 C9orf78Q9NZ63 289 aaPredicted RBP9.45□□□□□ -0.9
PTPN18-206ENST00000460992 BRPF3Q9ULD4 1205 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 ATP6V0A2Q9Y487 856 aa9.45□□□□□ -0.9
PTPN18-206ENST00000460992 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 HSP90AA1P07900 732 aaKnown RBP9.44□□□□□ -0.9
PTPN18-206ENST00000460992 HSP90B1P14625 803 aaKnown RBP9.44□□□□□ -0.9
PTPN18-206ENST00000460992 LMNB1P20700 586 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 RAB3GAP1Q15042 981 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 TTLL11Q8NHH1 800 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 KAZALD1Q96I82 304 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 MEIS3Q99687 375 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 UTYO14607 1347 aa9.44□□□□□ -0.9
PTPN18-206ENST00000460992 ZNF541Q9H0D2 1346 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 REC8O95072 547 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 ITGA6P23229 1130 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 MCM2P49736 904 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 CCT4P50991 539 aaKnown RBP9.43□□□□□ -0.9
PTPN18-206ENST00000460992 FOXO4P98177 505 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 ANKRD44Q8N8A2 993 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
PTPN18-206ENST00000460992 GPR101Q96P66 508 aaPredicted RBP9.43□□□□□ -0.9
PTPN18-206ENST00000460992 CDC5LQ99459 802 aaKnown RBP9.43□□□□□ -0.9
PTPN18-206ENST00000460992 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
PTPN18-206ENST00000460992 BICC1Q9H694 974 aaKnown RBP9.43□□□□□ -0.9
PTPN18-206ENST00000460992 ZC3H4Q9UPT8 1303 aaKnown RBP9.42□□□□□ -0.9
PTPN18-206ENST00000460992 IARSP41252 1262 aaKnown RBP9.42□□□□□ -0.9
PTPN18-206ENST00000460992 GPSM2P81274 684 aa9.42□□□□□ -0.9
PTPN18-206ENST00000460992 AOC3Q16853 763 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms