RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 GTF3C2Q8WUA4 911 aaPredicted RBP9.02□□□□□ -0.97
FAM228B-201ENST00000460686 NUDT16Q96DE0 195 aaKnown RBP9.02□□□□□ -0.97
FAM228B-201ENST00000460686 USP21Q9UK80 565 aa9.02□□□□□ -0.97
FAM228B-201ENST00000460686 CARNS1A5YM72 827 aa9.01□□□□□ -0.97
FAM228B-201ENST00000460686 SELPP16109 830 aa9.01□□□□□ -0.97
FAM228B-201ENST00000460686 HYAL2Q12891 473 aa9.01□□□□□ -0.97
FAM228B-201ENST00000460686 TTC16Q8NEE8 873 aa9.01□□□□□ -0.97
FAM228B-201ENST00000460686 OR13H1Q8NG92 308 aa9.01□□□□□ -0.97
FAM228B-201ENST00000460686 HOXD8P13378 290 aaPredicted RBP9□□□□□ -0.97
FAM228B-201ENST00000460686 PCSK2P16519 638 aa9□□□□□ -0.97
FAM228B-201ENST00000460686 DNM1Q05193 864 aaKnown RBP9□□□□□ -0.97
FAM228B-201ENST00000460686 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
FAM228B-201ENST00000460686 DTWD1Q8N5C7 304 aa9□□□□□ -0.97
FAM228B-201ENST00000460686 EDEM1Q92611 657 aa9□□□□□ -0.97
FAM228B-201ENST00000460686 SPACA7Q96KW9 195 aa9□□□□□ -0.97
FAM228B-201ENST00000460686 ARID3AQ99856 593 aa9□□□□□ -0.97
FAM228B-201ENST00000460686 MTMR7Q9Y216 660 aa9□□□□□ -0.97
FAM228B-201ENST00000460686 MPSTP25325 297 aa8.99□□□□□ -0.97
FAM228B-201ENST00000460686 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
FAM228B-201ENST00000460686 MTMR3Q13615 1198 aa8.99□□□□□ -0.97
FAM228B-201ENST00000460686 MBTPS1Q14703 1052 aa8.99□□□□□ -0.97
FAM228B-201ENST00000460686 ZNF438Q7Z4V0 828 aa8.99□□□□□ -0.97
FAM228B-201ENST00000460686 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
FAM228B-201ENST00000460686 SEMA6BQ9H3T3 888 aa8.99□□□□□ -0.97
FAM228B-201ENST00000460686 ABI2Q9NYB9 513 aaPredicted RBP8.99□□□□□ -0.97
FAM228B-201ENST00000460686 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
FAM228B-201ENST00000460686 AAMPQ13685 434 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 ADGRE1Q14246 886 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 COL13A1Q5TAT6 717 aaPredicted RBP8.98□□□□□ -0.97
FAM228B-201ENST00000460686 FBXO11Q86XK2 927 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 IL22RA1Q8N6P7 574 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 ELP3Q9H9T3 547 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 TPSG1Q9NRR2 321 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 TRIM33Q9UPN9 1127 aa8.98□□□□□ -0.97
FAM228B-201ENST00000460686 DCAF1Q9Y4B6 1507 aa8.97□□□□□ -0.97
FAM228B-201ENST00000460686 RPLP1P05386 114 aaKnown RBP8.97□□□□□ -0.97
FAM228B-201ENST00000460686 EIF1AXP47813 144 aaKnown RBP8.97□□□□□ -0.97
FAM228B-201ENST00000460686 C8orf34Q49A92 452 aa8.97□□□□□ -0.97
FAM228B-201ENST00000460686 PDE12Q6L8Q7 609 aaKnown RBP8.97□□□□□ -0.97
FAM228B-201ENST00000460686 ERICH6Q7L0X2 663 aa8.97□□□□□ -0.97
FAM228B-201ENST00000460686 TXNRD3Q86VQ6 643 aa8.97□□□□□ -0.97
FAM228B-201ENST00000460686 TMEM63CQ9P1W3 806 aa8.97□□□□□ -0.97
FAM228B-201ENST00000460686 SUPT5HO00267 1087 aaKnown RBP8.96□□□□□ -0.98
FAM228B-201ENST00000460686 ABL1P00519 1130 aa8.96□□□□□ -0.98
FAM228B-201ENST00000460686 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.98
FAM228B-201ENST00000460686 ATP11AP98196 1134 aa8.96□□□□□ -0.98
FAM228B-201ENST00000460686 ILDR2Q71H61 639 aa8.96□□□□□ -0.98
FAM228B-201ENST00000460686 NCAPG2Q86XI2 1143 aa8.96□□□□□ -0.98
FAM228B-201ENST00000460686 UNC13AQ9UPW8 1703 aa8.95□□□□□ -0.98
FAM228B-201ENST00000460686 SMNDC1O75940 238 aaKnown RBP eCLIP8.95□□□□□ -0.98
FAM228B-201ENST00000460686 PDGFAP04085 211 aa8.95□□□□□ -0.98
FAM228B-201ENST00000460686 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
FAM228B-201ENST00000460686 ALKBH2Q6NS38 261 aa8.95□□□□□ -0.98
FAM228B-201ENST00000460686 LOC100996750A0A140TA64 210 aa8.94□□□□□ -0.98
FAM228B-201ENST00000460686 DEAF1O75398 565 aaPredicted RBP8.94□□□□□ -0.98
FAM228B-201ENST00000460686 MZF1P28698 734 aaPredicted RBP8.94□□□□□ -0.98
FAM228B-201ENST00000460686 KRTAP4-6Q9BYQ5 205 aa8.94□□□□□ -0.98
FAM228B-201ENST00000460686 LACRTQ9GZZ8 138 aa8.94□□□□□ -0.98
FAM228B-201ENST00000460686 KANSL3Q9P2N6 904 aa8.94□□□□□ -0.98
FAM228B-201ENST00000460686 BICRAQ9NZM4 1560 aa8.94□□□□□ -0.98
FAM228B-201ENST00000460686 A6NHS1 94 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 RSPO4Q2I0M5 234 aaPredicted RBP8.93□□□□□ -0.98
FAM228B-201ENST00000460686 PHLDB3Q6NSJ2 640 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 IGF2-ASQ6U949 168 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 RASSF4Q9H2L5 321 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 GGNBP2Q9H3C7 697 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 ANO2Q9NQ90 1003 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 POLIQ9UNA4 740 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 USTQ9Y2C2 406 aa8.93□□□□□ -0.98
FAM228B-201ENST00000460686 FAM13AO94988 1023 aa8.92□□□□□ -0.98
FAM228B-201ENST00000460686 ZNF211Q13398 564 aaPredicted RBP8.92□□□□□ -0.98
FAM228B-201ENST00000460686 B4GALNT3Q6L9W6 998 aa8.92□□□□□ -0.98
FAM228B-201ENST00000460686 CACTIN-AS1Q8N1I8 211 aa8.92□□□□□ -0.98
FAM228B-201ENST00000460686 CNTN3Q9P232 1028 aa8.92□□□□□ -0.98
FAM228B-201ENST00000460686 PPME1Q9Y570 386 aa8.92□□□□□ -0.98
FAM228B-201ENST00000460686 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 KIF4AO95239 1232 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 CES1P23141 567 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 CDC25BP30305 580 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 IREB2P48200 963 aaKnown RBP8.91□□□□□ -0.98
FAM228B-201ENST00000460686 SF3B2Q13435 895 aaKnown RBP8.91□□□□□ -0.98
FAM228B-201ENST00000460686 NKAPLQ5M9Q1 402 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 C1orf127Q8N9H9 656 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 WFDC12Q8WWY7 111 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 PBX4Q9BYU1 374 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 MUC3BQ9H195 1237 aa8.91□□□□□ -0.98
FAM228B-201ENST00000460686 LINC01387J3KSC0 135 aa8.9□□□□□ -0.98
FAM228B-201ENST00000460686 DLL1O00548 723 aa8.9□□□□□ -0.98
FAM228B-201ENST00000460686 CDC27P30260 824 aa8.9□□□□□ -0.98
FAM228B-201ENST00000460686 FKBP4Q02790 459 aaKnown RBP eCLIP8.9□□□□□ -0.98
FAM228B-201ENST00000460686 XKR5Q6UX68 686 aa8.9□□□□□ -0.98
FAM228B-201ENST00000460686 MAP4K3Q8IVH8 894 aa8.9□□□□□ -0.98
FAM228B-201ENST00000460686 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
FAM228B-201ENST00000460686 SRA1Q9HD15 236 aaKnown RBP8.9□□□□□ -0.98
FAM228B-201ENST00000460686 DYRK3O43781 588 aa8.89□□□□□ -0.99
FAM228B-201ENST00000460686 SETDB1Q15047 1291 aa8.89□□□□□ -0.99
FAM228B-201ENST00000460686 TXNDC11Q6PKC3 985 aa8.89□□□□□ -0.99
FAM228B-201ENST00000460686 CEP120Q8N960 986 aa8.89□□□□□ -0.99
FAM228B-201ENST00000460686 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms