RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
COMMD6-206ENST00000460675 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
COMMD6-206ENST00000460675 AKAP11Q9UKA4 1901 aa13.71□□□□□ -0.21
COMMD6-206ENST00000460675 SLC10A3P09131 477 aa13.71□□□□□ -0.21
COMMD6-206ENST00000460675 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
COMMD6-206ENST00000460675 CTU1Q7Z7A3 348 aaKnown RBP13.71□□□□□ -0.21
COMMD6-206ENST00000460675 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
COMMD6-206ENST00000460675 GGA3Q9NZ52 723 aa13.71□□□□□ -0.21
COMMD6-206ENST00000460675 RTL9Q8NET4 1388 aa13.71□□□□□ -0.22
COMMD6-206ENST00000460675 ASTN2O75129 1339 aaPredicted RBP13.7□□□□□ -0.22
COMMD6-206ENST00000460675 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 CDCA5Q96FF9 252 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 CHPF2Q9P2E5 772 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
COMMD6-206ENST00000460675 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
COMMD6-206ENST00000460675 VIL1P09327 827 aaKnown RBP13.69□□□□□ -0.22
COMMD6-206ENST00000460675 RPS8P62241 208 aaKnown RBP13.69□□□□□ -0.22
COMMD6-206ENST00000460675 LMOD3Q0VAK6 560 aa13.69□□□□□ -0.22
COMMD6-206ENST00000460675 SCARF1Q14162 830 aa13.69□□□□□ -0.22
COMMD6-206ENST00000460675 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
COMMD6-206ENST00000460675 DDX60Q8IY21 1712 aaKnown RBP13.68□□□□□ -0.22
COMMD6-206ENST00000460675 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
COMMD6-206ENST00000460675 TNRC18O15417 2968 aaPredicted RBP13.68□□□□□ -0.22
COMMD6-206ENST00000460675 TMPOP42166 694 aaKnown RBP13.68□□□□□ -0.22
COMMD6-206ENST00000460675 NEUROD2Q15784 382 aa13.68□□□□□ -0.22
COMMD6-206ENST00000460675 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
COMMD6-206ENST00000460675 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
COMMD6-206ENST00000460675 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
COMMD6-206ENST00000460675 ANKIB1Q9P2G1 1089 aa13.68□□□□□ -0.22
COMMD6-206ENST00000460675 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
COMMD6-206ENST00000460675 UFL1O94874 794 aa13.67□□□□□ -0.22
COMMD6-206ENST00000460675 HDGFL1Q5TGJ6 251 aa13.67□□□□□ -0.22
COMMD6-206ENST00000460675 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
COMMD6-206ENST00000460675 HPS5Q9UPZ3 1129 aa13.67□□□□□ -0.22
COMMD6-206ENST00000460675 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
COMMD6-206ENST00000460675 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
COMMD6-206ENST00000460675 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
COMMD6-206ENST00000460675 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
COMMD6-206ENST00000460675 CHL1O00533 1208 aa13.65□□□□□ -0.22
COMMD6-206ENST00000460675 TBC1D8O95759 1140 aa13.65□□□□□ -0.22
COMMD6-206ENST00000460675 ZNF280AP59817 542 aaPredicted RBP13.65□□□□□ -0.22
COMMD6-206ENST00000460675 FKBP1BP68106 108 aa13.65□□□□□ -0.22
COMMD6-206ENST00000460675 RSBN1LQ6PCB5 846 aaPredicted RBP13.65□□□□□ -0.22
COMMD6-206ENST00000460675 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.22
COMMD6-206ENST00000460675 SCAF8Q9UPN6 1271 aaKnown RBP13.65□□□□□ -0.22
COMMD6-206ENST00000460675 COL4A1P02462 1669 aa13.65□□□□□ -0.22
COMMD6-206ENST00000460675 SCN9AQ15858 1988 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 UBE2Q2LH0YL09 131 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 TTLL12Q14166 644 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-206ENST00000460675 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
COMMD6-206ENST00000460675 MOB2Q70IA6 237 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 ZNF296Q8WUU4 475 aaPredicted RBP13.64□□□□□ -0.23
COMMD6-206ENST00000460675 MYOZ2Q9NPC6 264 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
COMMD6-206ENST00000460675 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
COMMD6-206ENST00000460675 TRIM28Q13263 835 aaKnown RBP13.63□□□□□ -0.23
COMMD6-206ENST00000460675 PRAMEF18Q5VWM3 479 aa13.63□□□□□ -0.23
COMMD6-206ENST00000460675 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
COMMD6-206ENST00000460675 USP17L3A6NCW0 530 aa13.62□□□□□ -0.23
COMMD6-206ENST00000460675 USP17L4A6NCW7 530 aa13.62□□□□□ -0.23
COMMD6-206ENST00000460675 HOXB7P09629 217 aa13.62□□□□□ -0.23
COMMD6-206ENST00000460675 CCDC152Q4G0S7 254 aa13.62□□□□□ -0.23
COMMD6-206ENST00000460675 USP17L1Q7RTZ2 530 aa13.62□□□□□ -0.23
COMMD6-206ENST00000460675 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
COMMD6-206ENST00000460675 CCDC85AQ96PX6 553 aaPredicted RBP13.62□□□□□ -0.23
COMMD6-206ENST00000460675 PITPNM2Q9BZ72 1349 aa13.62□□□□□ -0.23
COMMD6-206ENST00000460675 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
COMMD6-206ENST00000460675 DUSP27Q5VZP5 1158 aa13.61□□□□□ -0.23
COMMD6-206ENST00000460675 JARID2Q92833 1246 aaPredicted RBP13.61□□□□□ -0.23
COMMD6-206ENST00000460675 GMLQ99445 158 aa13.61□□□□□ -0.23
COMMD6-206ENST00000460675 XDHP47989 1333 aa13.61□□□□□ -0.23
COMMD6-206ENST00000460675 PAPPA2Q9BXP8 1791 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 GPR25O00155 361 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 PDE8AO60658 829 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 NF2P35240 595 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 TM4SF4P48230 202 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 NBPF9Q3BBW0 867 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 PODNQ7Z5L7 613 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 ANKRD18AQ8IVF6 992 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 MYD88Q99836 296 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
COMMD6-206ENST00000460675 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
COMMD6-206ENST00000460675 FBXO46Q6PJ61 603 aaPredicted RBP13.59□□□□□ -0.23
COMMD6-206ENST00000460675 OGFOD1Q8N543 542 aa13.59□□□□□ -0.23
COMMD6-206ENST00000460675 PHAXQ9H814 394 aaKnown RBP13.59□□□□□ -0.23
COMMD6-206ENST00000460675 ZNF609O15014 1411 aa13.58□□□□□ -0.24
COMMD6-206ENST00000460675 FKTNO75072 461 aa13.58□□□□□ -0.24
COMMD6-206ENST00000460675 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
COMMD6-206ENST00000460675 PRKG1Q13976 671 aa13.58□□□□□ -0.24
COMMD6-206ENST00000460675 CCDC191Q8NCU4 936 aa13.58□□□□□ -0.24
COMMD6-206ENST00000460675 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
COMMD6-206ENST00000460675 MXD3Q9BW11 206 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms