RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 CLASRPQ8N2M8 674 aaKnown RBP15.38■□□□□ 0.05
ZNF3-211ENST00000460331 ANKRD2Q9GZV1 360 aa15.38■□□□□ 0.05
ZNF3-211ENST00000460331 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
ZNF3-211ENST00000460331 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 PPEF1O14829 653 aaPredicted RBP15.37■□□□□ 0.05
ZNF3-211ENST00000460331 DPEP1P16444 411 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 NUCB1Q02818 461 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 SP8Q8IXZ3 490 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 TTLL6Q8N841 843 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 GPR108Q9NPR9 543 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 PIM2Q9P1W9 311 aa15.37■□□□□ 0.05
ZNF3-211ENST00000460331 KIF13BQ9NQT8 1826 aa15.36■□□□□ 0.05
ZNF3-211ENST00000460331 SASH1O94885 1247 aa15.36■□□□□ 0.05
ZNF3-211ENST00000460331 CHRNDQ07001 517 aa15.36■□□□□ 0.05
ZNF3-211ENST00000460331 TFCP2Q12800 502 aa15.36■□□□□ 0.05
ZNF3-211ENST00000460331 CC2D2BQ6DHV5 1058 aa15.36■□□□□ 0.05
ZNF3-211ENST00000460331 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
ZNF3-211ENST00000460331 PDE8BO95263 885 aa15.35■□□□□ 0.05
ZNF3-211ENST00000460331 GRIPAP1Q4V328 841 aa15.35■□□□□ 0.05
ZNF3-211ENST00000460331 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
ZNF3-211ENST00000460331 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
ZNF3-211ENST00000460331 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
ZNF3-211ENST00000460331 ANKIB1Q9P2G1 1089 aa15.34■□□□□ 0.05
ZNF3-211ENST00000460331 LRP5O75197 1615 aa15.34■□□□□ 0.05
ZNF3-211ENST00000460331 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
ZNF3-211ENST00000460331 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.04
ZNF3-211ENST00000460331 KCNA3P22001 575 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 KCNJ4P48050 445 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 UBE4AQ14139 1066 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.04
ZNF3-211ENST00000460331 TNNI3KQ59H18 835 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
ZNF3-211ENST00000460331 SOGA3Q5TF21 947 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 LNPKQ9C0E8 428 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 FPGT-TNNI3KV9GXZ4 949 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 XDHP47989 1333 aa15.33■□□□□ 0.04
ZNF3-211ENST00000460331 COL11A2P13942 1736 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-211ENST00000460331 IFIT1P09914 478 aaKnown RBP15.32■□□□□ 0.04
ZNF3-211ENST00000460331 SLC5A1P13866 664 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 ATP2B4P23634 1241 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 ATP2B3Q16720 1220 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 AACSQ86V21 672 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 VGLL2Q8N8G2 317 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 HELBQ8NG08 1087 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-211ENST00000460331 LPIN2Q92539 896 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
ZNF3-211ENST00000460331 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
ZNF3-211ENST00000460331 NSFL1CQ9UNZ2 370 aaKnown RBP15.32■□□□□ 0.04
ZNF3-211ENST00000460331 TAF5LO75529 589 aa15.31■□□□□ 0.04
ZNF3-211ENST00000460331 MPNDQ8N594 471 aa15.31■□□□□ 0.04
ZNF3-211ENST00000460331 GPATCH3Q96I76 525 aa15.31■□□□□ 0.04
ZNF3-211ENST00000460331 PODXL2Q9NZ53 605 aa15.31■□□□□ 0.04
ZNF3-211ENST00000460331 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
ZNF3-211ENST00000460331 TAF1P21675 1872 aa15.31■□□□□ 0.04
ZNF3-211ENST00000460331 A0A1B0GUL7 405 aa15.3■□□□□ 0.04
ZNF3-211ENST00000460331 GORABQ5T7V8 394 aa15.3■□□□□ 0.04
ZNF3-211ENST00000460331 EAF2Q96CJ1 260 aaPredicted RBP15.3■□□□□ 0.04
ZNF3-211ENST00000460331 SYT17Q9BSW7 474 aa15.3■□□□□ 0.04
ZNF3-211ENST00000460331 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
ZNF3-211ENST00000460331 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
ZNF3-211ENST00000460331 ZNF804BA4D1E1 1349 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 FGFR2P21802 821 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 TIMM10P62072 90 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 GPSM2P81274 684 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 DPP8Q6V1X1 898 aaPredicted RBP15.29■□□□□ 0.04
ZNF3-211ENST00000460331 RTKN2Q8IZC4 609 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 SUPT20HQ8NEM7 779 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 C7orf43Q8WVR3 580 aa15.29■□□□□ 0.04
ZNF3-211ENST00000460331 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
ZNF3-211ENST00000460331 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
ZNF3-211ENST00000460331 COL4A1P02462 1669 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 C21orf2O43822 256 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 CAVIN4Q5BKX8 364 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 CCDC158Q5M9N0 1113 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 C16orf71Q8IYS4 520 aaPredicted RBP15.28■□□□□ 0.04
ZNF3-211ENST00000460331 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 EYA3Q99504 573 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
ZNF3-211ENST00000460331 ZNF609O15014 1411 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 TTC41PQ6P2S7 1318 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 KIAA1551Q9HCM1 1747 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 C6orf229H3BNL8 230 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 ERC2O15083 957 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 UFL1O94874 794 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 MX1P20591 662 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 XAGE2Q96GT9 111 aa15.27■□□□□ 0.04
ZNF3-211ENST00000460331 SLX4Q8IY92 1834 aa15.27■□□□□ 0.03
ZNF3-211ENST00000460331 RGS3P49796 1198 aa15.26■□□□□ 0.03
ZNF3-211ENST00000460331 C15orf52Q6ZUT6 534 aaKnown RBP15.26■□□□□ 0.03
ZNF3-211ENST00000460331 VPS37DQ86XT2 251 aa15.26■□□□□ 0.03
ZNF3-211ENST00000460331 PLEKHM2Q8IWE5 1019 aa15.26■□□□□ 0.03
ZNF3-211ENST00000460331 TBC1D16Q8TBP0 767 aa15.26■□□□□ 0.03
ZNF3-211ENST00000460331 DBNDD2Q9BQY9 259 aa15.26■□□□□ 0.03
ZNF3-211ENST00000460331 ECHDC1Q9NTX5 307 aa15.26■□□□□ 0.03
ZNF3-211ENST00000460331 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
ZNF3-211ENST00000460331 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms