RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SLC10A5Q5PT55 438 aa10.34□□□□□ -0.75
HPS4-207ENST00000459918 COPS6Q7L5N1 327 aa10.34□□□□□ -0.75
HPS4-207ENST00000459918 XAGE3Q8WTP9 111 aa10.34□□□□□ -0.75
HPS4-207ENST00000459918 EYA3Q99504 573 aa10.34□□□□□ -0.75
HPS4-207ENST00000459918 ECE2O60344 883 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 PROSER3Q2NL68 480 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 CTU1Q7Z7A3 348 aaKnown RBP10.33□□□□□ -0.76
HPS4-207ENST00000459918 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 DPF2Q92785 391 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 RNF186Q9NXI6 227 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 HDAC9Q9UKV0 1011 aa10.33□□□□□ -0.76
HPS4-207ENST00000459918 RPS12P25398 132 aaKnown RBP10.32□□□□□ -0.76
HPS4-207ENST00000459918 RTL5Q5HYW3 569 aaPredicted RBP10.32□□□□□ -0.76
HPS4-207ENST00000459918 LAS1LQ9Y4W2 734 aaKnown RBP10.32□□□□□ -0.76
HPS4-207ENST00000459918 FAM155AB1AL88 458 aaPredicted RBP10.31□□□□□ -0.76
HPS4-207ENST00000459918 EGFRP00533 1210 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 SLC10A3P09131 477 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 RIPK4P57078 832 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 LMOD3Q0VAK6 560 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 TCIRG1Q13488 830 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
HPS4-207ENST00000459918 PRPF38BQ5VTL8 546 aaKnown RBP10.31□□□□□ -0.76
HPS4-207ENST00000459918 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 CDCA5Q96FF9 252 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
HPS4-207ENST00000459918 ANKIB1Q9P2G1 1089 aa10.31□□□□□ -0.76
HPS4-207ENST00000459918 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
HPS4-207ENST00000459918 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
HPS4-207ENST00000459918 GPSM2P81274 684 aa10.3□□□□□ -0.76
HPS4-207ENST00000459918 PDIA6Q15084 440 aa10.3□□□□□ -0.76
HPS4-207ENST00000459918 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
HPS4-207ENST00000459918 CELF1Q92879 486 aaKnown RBP10.3□□□□□ -0.76
HPS4-207ENST00000459918 FAM89AQ96GI7 184 aa10.3□□□□□ -0.76
HPS4-207ENST00000459918 SCN9AQ15858 1988 aa10.3□□□□□ -0.76
HPS4-207ENST00000459918 SPEF2Q9C093 1822 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 UFL1O94874 794 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 HDGFL1Q5TGJ6 251 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 PLEKHF1Q96S99 279 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 POLLQ9UGP5 575 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
HPS4-207ENST00000459918 PSME4Q14997 1843 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 RTL9Q8NET4 1388 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 LRP10Q7Z4F1 713 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 KCNQ5Q9NR82 932 aa10.28□□□□□ -0.76
HPS4-207ENST00000459918 ASTN2O75129 1339 aaPredicted RBP10.28□□□□□ -0.76
HPS4-207ENST00000459918 IRS4O14654 1257 aaPredicted RBP10.27□□□□□ -0.77
HPS4-207ENST00000459918 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
HPS4-207ENST00000459918 HSP90B1P14625 803 aaKnown RBP10.27□□□□□ -0.77
HPS4-207ENST00000459918 NF2P35240 595 aa10.27□□□□□ -0.77
HPS4-207ENST00000459918 MKRN3Q13064 507 aaKnown RBP10.27□□□□□ -0.77
HPS4-207ENST00000459918 SCARF1Q14162 830 aa10.27□□□□□ -0.77
HPS4-207ENST00000459918 PKN2Q16513 984 aaKnown RBP10.27□□□□□ -0.77
HPS4-207ENST00000459918 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
HPS4-207ENST00000459918 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
HPS4-207ENST00000459918 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
HPS4-207ENST00000459918 GGA1Q9UJY5 639 aa10.27□□□□□ -0.77
HPS4-207ENST00000459918 COL4A1P02462 1669 aa10.26□□□□□ -0.77
HPS4-207ENST00000459918 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
HPS4-207ENST00000459918 RPS8P62241 208 aaKnown RBP10.26□□□□□ -0.77
HPS4-207ENST00000459918 FKBP1BP68106 108 aa10.26□□□□□ -0.77
HPS4-207ENST00000459918 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
HPS4-207ENST00000459918 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
HPS4-207ENST00000459918 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
HPS4-207ENST00000459918 MYOZ2Q9NPC6 264 aa10.26□□□□□ -0.77
HPS4-207ENST00000459918 BABAM1Q9NWV8 329 aa10.26□□□□□ -0.77
HPS4-207ENST00000459918 DBF4Q9UBU7 674 aaPredicted RBP10.26□□□□□ -0.77
HPS4-207ENST00000459918 SCAF8Q9UPN6 1271 aaKnown RBP10.26□□□□□ -0.77
HPS4-207ENST00000459918 VIL1P09327 827 aaKnown RBP10.25□□□□□ -0.77
HPS4-207ENST00000459918 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
HPS4-207ENST00000459918 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
HPS4-207ENST00000459918 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
HPS4-207ENST00000459918 MOB2Q70IA6 237 aa10.25□□□□□ -0.77
HPS4-207ENST00000459918 ZNF296Q8WUU4 475 aaPredicted RBP10.25□□□□□ -0.77
HPS4-207ENST00000459918 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 TMPOP42166 694 aaKnown RBP10.24□□□□□ -0.77
HPS4-207ENST00000459918 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
HPS4-207ENST00000459918 CCDC152Q4G0S7 254 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 OGFOD1Q8N543 542 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 AGBL3Q8NEM8 1001 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 GCC1Q96CN9 775 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 HYPKQ9NX55 129 aa10.24□□□□□ -0.77
HPS4-207ENST00000459918 MYH3P11055 1940 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 USP17L3A6NCW0 530 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 PRKG1Q13976 671 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 PRAMEF18Q5VWM3 479 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 ANKRD18AQ8IVF6 992 aa10.23□□□□□ -0.77
HPS4-207ENST00000459918 ISCA1Q9BUE6 129 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms