RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 ANKRD18BA2A2Z9 1011 aa26.17■■□□□ 1.78
VARS-218ENST00000459667 UFL1O94874 794 aa26.17■■□□□ 1.78
VARS-218ENST00000459667 LMBR1LQ6UX01 489 aa26.17■■□□□ 1.78
VARS-218ENST00000459667 RBM46Q8TBY0 533 aaKnown RBP26.17■■□□□ 1.78
VARS-218ENST00000459667 SUCLG2Q96I99 432 aa26.17■■□□□ 1.78
VARS-218ENST00000459667 GGA1Q9UJY5 639 aa26.17■■□□□ 1.78
VARS-218ENST00000459667 IQCA1LA6NCM1 817 aa26.16■■□□□ 1.78
VARS-218ENST00000459667 GJA3Q9Y6H8 435 aa26.16■■□□□ 1.78
VARS-218ENST00000459667 RIMBP2O15034 1052 aa26.15■■□□□ 1.78
VARS-218ENST00000459667 CCT4P50991 539 aaKnown RBP26.15■■□□□ 1.78
VARS-218ENST00000459667 IFIT5Q13325 482 aaKnown RBP26.15■■□□□ 1.78
VARS-218ENST00000459667 GPR101Q96P66 508 aaPredicted RBP26.15■■□□□ 1.78
VARS-218ENST00000459667 MPHOSPH8Q99549 860 aa26.15■■□□□ 1.78
VARS-218ENST00000459667 MINPP1Q9UNW1 487 aa26.15■■□□□ 1.78
VARS-218ENST00000459667 BCAR3O75815 825 aa26.13■■□□□ 1.77
VARS-218ENST00000459667 ARHGAP45Q92619 1136 aa26.13■■□□□ 1.77
VARS-218ENST00000459667 KAZALD1Q96I82 304 aa26.13■■□□□ 1.77
VARS-218ENST00000459667 USP44Q9H0E7 712 aa26.13■■□□□ 1.77
VARS-218ENST00000459667 ATP2B4P23634 1241 aa26.12■■□□□ 1.77
VARS-218ENST00000459667 CXCL9Q07325 125 aa26.12■■□□□ 1.77
VARS-218ENST00000459667 CCDC57Q2TAC2 916 aa26.12■■□□□ 1.77
VARS-218ENST00000459667 ZC3H12CQ9C0D7 883 aaKnown RBP26.12■■□□□ 1.77
VARS-218ENST00000459667 DBNDD1Q9H9R9 158 aa26.12■■□□□ 1.77
VARS-218ENST00000459667 HACL1Q9UJ83 578 aa26.12■■□□□ 1.77
VARS-218ENST00000459667 BICC1Q9H694 974 aaKnown RBP26.11■■□□□ 1.77
VARS-218ENST00000459667 YDJCA8MPS7 323 aa26.1■■□□□ 1.77
VARS-218ENST00000459667 IPO8O15397 1037 aaKnown RBP26.1■■□□□ 1.77
VARS-218ENST00000459667 TAF7LQ5H9L4 462 aa26.1■■□□□ 1.77
VARS-218ENST00000459667 CIAPIN1Q6FI81 312 aa26.1■■□□□ 1.77
VARS-218ENST00000459667 SMC1BQ8NDV3 1235 aa26.1■■□□□ 1.77
VARS-218ENST00000459667 FRAT1Q92837 279 aaPredicted RBP26.1■■□□□ 1.77
VARS-218ENST00000459667 TAF1DQ9H5J8 278 aaPredicted RBP26.1■■□□□ 1.77
VARS-218ENST00000459667 ECE2O60344 883 aa26.09■■□□□ 1.77
VARS-218ENST00000459667 RAD17O75943 681 aa26.09■■□□□ 1.77
VARS-218ENST00000459667 FSTL1Q12841 308 aa26.09■■□□□ 1.77
VARS-218ENST00000459667 DOK7Q18PE1 504 aa26.09■■□□□ 1.77
VARS-218ENST00000459667 ANKRD2Q9GZV1 360 aa26.09■■□□□ 1.77
VARS-218ENST00000459667 LMOD1P29536 600 aaPredicted RBP26.08■■□□□ 1.77
VARS-218ENST00000459667 TNIP1Q15025 636 aa26.08■■□□□ 1.77
VARS-218ENST00000459667 RABL6Q3YEC7 729 aaPredicted RBP26.08■■□□□ 1.77
VARS-218ENST00000459667 ANKRD44Q8N8A2 993 aa26.08■■□□□ 1.77
VARS-218ENST00000459667 ZNF594Q96JF6 807 aaPredicted RBP26.08■■□□□ 1.77
VARS-218ENST00000459667 G3V3G9 751 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 EPHX2P34913 555 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 SCNN1DP51172 638 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 CHRNDQ07001 517 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 DCAF8Q5TAQ9 597 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 A0A1B0GUL6 1792 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 MED23Q9ULK4 1368 aa26.07■■□□□ 1.76
VARS-218ENST00000459667 TRIM27P14373 513 aa26.06■■□□□ 1.76
VARS-218ENST00000459667 HSPA6P17066 643 aa26.06■■□□□ 1.76
VARS-218ENST00000459667 ATF7IPQ6VMQ6 1270 aa26.06■■□□□ 1.76
VARS-218ENST00000459667 LEMD3Q9Y2U8 911 aa26.06■■□□□ 1.76
VARS-218ENST00000459667 WTIPA6NIX2 430 aaPredicted RBP26.05■■□□□ 1.76
VARS-218ENST00000459667 UBTFL1P0CB47 393 aaPredicted RBP26.05■■□□□ 1.76
VARS-218ENST00000459667 POTEIP0CG38 1075 aa26.05■■□□□ 1.76
VARS-218ENST00000459667 POTEJP0CG39 1038 aa26.05■■□□□ 1.76
VARS-218ENST00000459667 LDHAL6AQ6ZMR3 332 aa26.05■■□□□ 1.76
VARS-218ENST00000459667 GMPSP49915 693 aaPredicted RBP26.04■■□□□ 1.76
VARS-218ENST00000459667 EAPPQ56P03 285 aaPredicted RBP26.04■■□□□ 1.76
VARS-218ENST00000459667 INTS3Q68E01 1043 aaKnown RBP26.04■■□□□ 1.76
VARS-218ENST00000459667 CNNM1Q9NRU3 951 aa26.04■■□□□ 1.76
VARS-218ENST00000459667 ZNF804BA4D1E1 1349 aa26.04■■□□□ 1.76
VARS-218ENST00000459667 PSMD14O00487 310 aa26.03■■□□□ 1.76
VARS-218ENST00000459667 EPS15P42566 896 aa26.03■■□□□ 1.76
VARS-218ENST00000459667 KCNJ4P48050 445 aa26.03■■□□□ 1.76
VARS-218ENST00000459667 ZKSCAN2Q63HK3 967 aa26.03■■□□□ 1.76
VARS-218ENST00000459667 PNMA8AQ86V59 439 aaPredicted RBP26.03■■□□□ 1.76
VARS-218ENST00000459667 TNNQ9UQP3 1299 aa26.03■■□□□ 1.76
VARS-218ENST00000459667 SCN9AQ15858 1988 aa26.03■■□□□ 1.76
VARS-218ENST00000459667 CHADLQ6NUI6 762 aa26.02■■□□□ 1.76
VARS-218ENST00000459667 LDHDQ86WU2 507 aa26.02■■□□□ 1.76
VARS-218ENST00000459667 HELBQ8NG08 1087 aaPredicted RBP26.02■■□□□ 1.76
VARS-218ENST00000459667 KCNQ5Q9NR82 932 aa26.02■■□□□ 1.76
VARS-218ENST00000459667 GPRC5DQ9NZD1 345 aa26.02■■□□□ 1.76
VARS-218ENST00000459667 TAF5LO75529 589 aa26.01■■□□□ 1.75
VARS-218ENST00000459667 ADAMTSL1Q8N6G6 1762 aa26.01■■□□□ 1.75
VARS-218ENST00000459667 CLUAP1Q96AJ1 413 aa26.01■■□□□ 1.75
VARS-218ENST00000459667 MEIS3Q99687 375 aa26■■□□□ 1.75
VARS-218ENST00000459667 HDAC5Q9UQL6 1122 aa26■■□□□ 1.75
VARS-218ENST00000459667 PSME4Q14997 1843 aa26■■□□□ 1.75
VARS-218ENST00000459667 TXNRD3Q86VQ6 643 aa25.99■■□□□ 1.75
VARS-218ENST00000459667 PUS3Q9BZE2 481 aaKnown RBP25.99■■□□□ 1.75
VARS-218ENST00000459667 CLEC11AQ9Y240 323 aa25.99■■□□□ 1.75
VARS-218ENST00000459667 ZBTB12Q9Y330 459 aaPredicted RBP25.99■■□□□ 1.75
VARS-218ENST00000459667 PLIN1O60240 522 aa25.98■■□□□ 1.75
VARS-218ENST00000459667 KLRK1P26718 216 aa25.98■■□□□ 1.75
VARS-218ENST00000459667 PODNQ7Z5L7 613 aa25.98■■□□□ 1.75
VARS-218ENST00000459667 ADARB2Q9NS39 739 aaKnown RBP25.98■■□□□ 1.75
VARS-218ENST00000459667 LRRFIP2Q9Y608 721 aaKnown RBP25.98■■□□□ 1.75
VARS-218ENST00000459667 SNAP23O00161 211 aa25.97■■□□□ 1.75
VARS-218ENST00000459667 USP50Q70EL3 339 aaPredicted RBP25.97■■□□□ 1.75
VARS-218ENST00000459667 COA1Q9GZY4 146 aa25.97■■□□□ 1.75
VARS-218ENST00000459667 GNAI3P08754 354 aa25.96■■□□□ 1.75
VARS-218ENST00000459667 VIL1P09327 827 aaKnown RBP25.96■■□□□ 1.75
VARS-218ENST00000459667 RPS12P25398 132 aaKnown RBP25.96■■□□□ 1.75
VARS-218ENST00000459667 APLP1P51693 650 aa25.96■■□□□ 1.75
VARS-218ENST00000459667 KLHDC4Q8TBB5 520 aa25.96■■□□□ 1.75
VARS-218ENST00000459667 MICALL2Q8IY33 904 aa25.95■■□□□ 1.74
VARS-218ENST00000459667 TMEM57Q8N5G2 664 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms