RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 LILRB5O75023 590 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 RGS9O75916 674 aaPredicted RBP5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 GHRHP01286 108 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 NEFLP07196 543 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 KCNMA1Q12791 1236 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 PDE3BQ13370 1112 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 PERM1Q5SV97 790 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 ELMSAN1Q6PJG2 1045 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 HOMEZQ8IX15 550 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 TTC9Q92623 222 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 SPACA7Q96KW9 195 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 NAGPAQ9UK23 515 aa5.56□□□□□ -1.52
SCARNA18-201ENST00000459004 GNB5O14775 395 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 TNFRSF21O75509 655 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 KIF4AO95239 1232 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 CYP2E1P05181 493 aaPredicted RBP5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 CES1P23141 567 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 C8orf86Q6ZUL3 223 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 C1orf127Q8N9H9 656 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 TMC1Q8TDI8 760 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 SNX29Q8TEQ0 813 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 NUDT8Q8WV74 236 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 FAM129BQ96TA1 746 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 LPIN3Q9BQK8 851 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 RBCK1Q9BYM8 510 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 JPH1Q9HDC5 661 aaPredicted RBP5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 DCTN4Q9UJW0 460 aa5.55□□□□□ -1.52
SCARNA18-201ENST00000459004 PHACTR2O75167 634 aa5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 EIF2AK2P19525 551 aaKnown RBP5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 IRS1P35568 1242 aa5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 COL9A3Q14050 684 aaPredicted RBP5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 COL13A1Q5TAT6 717 aaPredicted RBP5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 NCAPG2Q86XI2 1143 aa5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 SMG9Q9H0W8 520 aaKnown RBP5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 CHRDQ9H2X0 955 aa5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 NOP53Q9NZM5 478 aaKnown RBP5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 SALL4Q9UJQ4 1053 aa5.54□□□□□ -1.52
SCARNA18-201ENST00000459004 SPDYE3A6NKU9 549 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 NID1P14543 1247 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 AFF1P51825 1210 aaKnown RBP5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 PLD4Q96BZ4 506 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 DMRTB1Q96MA1 342 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 PLVAPQ9BX97 442 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 ZFYVE28Q9HCC9 887 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 KANSL3Q9P2N6 904 aa5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 FOXD3Q9UJU5 478 aaPredicted RBP5.53□□□□□ -1.52
SCARNA18-201ENST00000459004 EREGO14944 169 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 MAPK1P28482 360 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 RASSF7Q02833 373 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 GRIK5Q16478 980 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 ALYREFQ86V81 257 aaKnown RBP5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 CACTIN-AS1Q8N1I8 211 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 CEP120Q8N960 986 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 TRIM11Q96F44 468 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 SUV39H2Q9H5I1 410 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 AMOTL2Q9Y2J4 779 aa5.52□□□□□ -1.53
SCARNA18-201ENST00000459004 SMNDC1O75940 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 IGHA2P01877 340 aa5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 MSL1Q68DK7 614 aa5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 TMC7Q7Z402 723 aa5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 ALKBH8Q96BT7 664 aaKnown RBP5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 PBX4Q9BYU1 374 aa5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 NIF3L1Q9GZT8 377 aa5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 RASSF4Q9H2L5 321 aa5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.51□□□□□ -1.53
SCARNA18-201ENST00000459004 GPR182O15218 404 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 EDN3P14138 238 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 GSK3AP49840 483 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 ATP11AP98196 1134 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 TRAPPC3LQ5T215 181 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 CEP135Q66GS9 1140 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 ILDR2Q71H61 639 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 SND1Q7KZF4 910 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 WFDC8Q8IUA0 241 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 ZSCAN29Q8IWY8 852 aaPredicted RBP5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 TMEM151AQ8N4L1 468 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 DNAJC25Q9H1X3 360 aa5.5□□□□□ -1.53
SCARNA18-201ENST00000459004 CPNE3O75131 537 aaKnown RBP5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 GDF11O95390 407 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 COL8A1P27658 744 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 PLCB3Q01970 1234 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 TRIM28Q13263 835 aaKnown RBP5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 PRRT3Q5FWE3 981 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 GDF6Q6KF10 455 aaPredicted RBP5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 GALNT12Q8IXK2 581 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 DMRTC2Q8IXT2 367 aaPredicted RBP5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 ASB16Q96NS5 453 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 DZANK1Q9NVP4 752 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 TRIM33Q9UPN9 1127 aa5.49□□□□□ -1.53
SCARNA18-201ENST00000459004 NFKBIEO00221 500 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 RAC1P63000 192 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 ORC1Q13415 861 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 DSC3Q14574 896 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 DTWD1Q8N5C7 304 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 TMEM102Q8N9M5 508 aaPredicted RBP5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 DCAF5Q96JK2 942 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 CSRNP1Q96S65 589 aa5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 POP1Q99575 1024 aaKnown RBP5.48□□□□□ -1.53
SCARNA18-201ENST00000459004 OSMRQ99650 979 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms