RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
SCFD1-203ENST00000458591 SCAND2PQ9GZW5 306 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-203ENST00000458591 ALDH8A1Q9H2A2 487 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-203ENST00000458591 HMG20BQ9P0W2 317 aa16.72■□□□□ 0.27
SCFD1-203ENST00000458591 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
SCFD1-203ENST00000458591 MEGF6O75095 1541 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 H3BQV1 296 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 CTDNEP1O95476 244 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 FGD1P98174 961 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 IFFO2Q5TF58 517 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 TTC5Q8N0Z6 440 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 CLSTN2Q9H4D0 955 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 SLIT3O75094 1523 aa16.71■□□□□ 0.27
SCFD1-203ENST00000458591 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.26
SCFD1-203ENST00000458591 DRC7Q8IY82 874 aa16.71■□□□□ 0.26
SCFD1-203ENST00000458591 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.26
SCFD1-203ENST00000458591 OVOS2A0A0G2JMS6 1433 aa16.71■□□□□ 0.26
SCFD1-203ENST00000458591 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
SCFD1-203ENST00000458591 CASP7P55210 303 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SCFD1-203ENST00000458591 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 PROSER2Q86WR7 435 aaPredicted RBP16.7■□□□□ 0.26
SCFD1-203ENST00000458591 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 PRIMPOLQ96LW4 560 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 HAUS7Q99871 368 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
SCFD1-203ENST00000458591 RIOK3O14730 519 aaKnown RBP16.7■□□□□ 0.26
SCFD1-203ENST00000458591 RABL6Q3YEC7 729 aaPredicted RBP16.7■□□□□ 0.26
SCFD1-203ENST00000458591 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
SCFD1-203ENST00000458591 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 ADD1P35611 737 aaKnown RBP16.69■□□□□ 0.26
SCFD1-203ENST00000458591 ARID5BQ14865 1188 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
SCFD1-203ENST00000458591 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 GOLPH3LQ9H4A5 285 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
SCFD1-203ENST00000458591 FOXO4P98177 505 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 C11orf57Q6ZUT1 292 aaPredicted RBP16.69■□□□□ 0.26
SCFD1-203ENST00000458591 ATG9AQ7Z3C6 839 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
SCFD1-203ENST00000458591 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
SCFD1-203ENST00000458591 PHRF1Q9P1Y6 1649 aaKnown RBP16.68■□□□□ 0.26
SCFD1-203ENST00000458591 ZNF165P49910 485 aa16.68■□□□□ 0.26
SCFD1-203ENST00000458591 RAB11FIP4Q86YS3 637 aa16.68■□□□□ 0.26
SCFD1-203ENST00000458591 NSUN7Q8NE18 718 aaKnown RBP16.68■□□□□ 0.26
SCFD1-203ENST00000458591 PUS3Q9BZE2 481 aaKnown RBP16.68■□□□□ 0.26
SCFD1-203ENST00000458591 MRC1P22897 1456 aa16.68■□□□□ 0.26
SCFD1-203ENST00000458591 ZNF75DP51815 510 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 KRT32Q14532 448 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 KBTBD3Q8NAB2 608 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
SCFD1-203ENST00000458591 HSP90AB3PQ58FF7 597 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 RBM43Q6ZSC3 357 aaKnown RBP16.67■□□□□ 0.26
SCFD1-203ENST00000458591 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
SCFD1-203ENST00000458591 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 USP28Q96RU2 1077 aa16.67■□□□□ 0.26
SCFD1-203ENST00000458591 PTPDC1A2A3K4 754 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 A1BGP04217 495 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 CABP4P57796 275 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 PAG1Q9NWQ8 432 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 PLA2G4DQ86XP0 818 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
SCFD1-203ENST00000458591 SMARCC2Q8TAQ2 1214 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
SCFD1-203ENST00000458591 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
SCFD1-203ENST00000458591 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 E7EWF7 191 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 M0R2C6 588 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 PFKFB2O60825 505 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCFD1-203ENST00000458591 ZSCAN25Q6NSZ9 544 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
SCFD1-203ENST00000458591 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
SCFD1-203ENST00000458591 TDRD7Q8NHU6 1098 aaKnown RBP16.65■□□□□ 0.26
SCFD1-203ENST00000458591 CACTINQ8WUQ7 758 aaKnown RBP16.65■□□□□ 0.26
SCFD1-203ENST00000458591 GJB4Q9NTQ9 266 aa16.65■□□□□ 0.26
SCFD1-203ENST00000458591 HSPD1P10809 573 aaKnown RBP16.64■□□□□ 0.25
SCFD1-203ENST00000458591 HAND2P61296 217 aa16.64■□□□□ 0.25
SCFD1-203ENST00000458591 PLBD2Q8NHP8 589 aa16.64■□□□□ 0.25
SCFD1-203ENST00000458591 TPM3P06753 285 aa16.64■□□□□ 0.25
SCFD1-203ENST00000458591 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
SCFD1-203ENST00000458591 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
SCFD1-203ENST00000458591 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
SCFD1-203ENST00000458591 C1orf167Q5SNV9 1468 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 H7C1W4 665 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 ATP2B3Q16720 1220 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 CLIP2Q9UDT6 1046 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 MAST3O60307 1309 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 CBX1P83916 185 aa16.63■□□□□ 0.25
SCFD1-203ENST00000458591 SNW1Q13573 536 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms