RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 ERCC4Q92889 916 aaPredicted RBP6.93□□□□□ -1.3
PTBP3-207ENST00000458258 GJD4Q96KN9 370 aaPredicted RBP6.93□□□□□ -1.3
PTBP3-207ENST00000458258 PRDM1O75626 825 aa6.93□□□□□ -1.3
PTBP3-207ENST00000458258 ME3Q16798 604 aa6.93□□□□□ -1.3
PTBP3-207ENST00000458258 DDR1Q08345 913 aa6.93□□□□□ -1.3
PTBP3-207ENST00000458258 RGPD5Q99666 1765 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 HSPA4P34932 840 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 GUCY1B3Q02153 619 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 TTC14Q96N46 770 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 HMG20BQ9P0W2 317 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 DYNLL1P63167 89 aaKnown RBP6.92□□□□□ -1.3
PTBP3-207ENST00000458258 MRC1P22897 1456 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 DDX58O95786 925 aaKnown RBP6.92□□□□□ -1.3
PTBP3-207ENST00000458258 TM4SF1P30408 202 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 RASGRF1Q13972 1273 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 TOB2Q14106 344 aaPredicted RBP6.92□□□□□ -1.3
PTBP3-207ENST00000458258 FNBP4Q8N3X1 1017 aaPredicted RBP6.92□□□□□ -1.3
PTBP3-207ENST00000458258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.92□□□□□ -1.3
PTBP3-207ENST00000458258 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
PTBP3-207ENST00000458258 MCM4P33991 863 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 ZKSCAN3Q9BRR0 538 aa6.92□□□□□ -1.3
PTBP3-207ENST00000458258 ROBO1Q9Y6N7 1651 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 hCG_1642624A0A1W2PR95 340 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 RIC1Q4ADV7 1423 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 PCCAP05165 728 aaPredicted RBP6.91□□□□□ -1.3
PTBP3-207ENST00000458258 SHROOM1Q2M3G4 852 aaPredicted RBP6.91□□□□□ -1.3
PTBP3-207ENST00000458258 CCNL1Q9UK58 526 aaPredicted RBP6.91□□□□□ -1.3
PTBP3-207ENST00000458258 SLC27A2O14975 620 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 CASTP20810 708 aaKnown RBP6.91□□□□□ -1.3
PTBP3-207ENST00000458258 ANTXR2P58335 489 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 SHISA4Q96DD7 197 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 EPB41L4AQ9HCS5 686 aaPredicted RBP6.91□□□□□ -1.3
PTBP3-207ENST00000458258 CREB3L3Q68CJ9 461 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 CCDC102BQ68D86 513 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
PTBP3-207ENST00000458258 JCADQ9P266 1359 aa6.91□□□□□ -1.3
PTBP3-207ENST00000458258 CYP2D6P10635 497 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 CCT2P78371 535 aaKnown RBP6.9□□□□□ -1.3
PTBP3-207ENST00000458258 CCDC82Q8N4S0 544 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 MAP4K1Q92918 833 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 LTN1O94822 1766 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.3
PTBP3-207ENST00000458258 TBC1D10CQ8IV04 446 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 ZBTB38Q8NAP3 1195 aaPredicted RBP6.9□□□□□ -1.3
PTBP3-207ENST00000458258 BRF1Q92994 677 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 TFIP11Q9UBB9 837 aaKnown RBP6.9□□□□□ -1.3
PTBP3-207ENST00000458258 METTL24Q5JXM2 366 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 AEBP2Q6ZN18 517 aaPredicted RBP6.9□□□□□ -1.3
PTBP3-207ENST00000458258 CCDC191Q8NCU4 936 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 PHRF1Q9P1Y6 1649 aaKnown RBP6.9□□□□□ -1.3
PTBP3-207ENST00000458258 PRDX5P30044 214 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 CTDSPL2Q05D32 466 aa6.9□□□□□ -1.3
PTBP3-207ENST00000458258 COL1A1P02452 1464 aaPredicted RBP6.9□□□□□ -1.31
PTBP3-207ENST00000458258 IDH1O75874 414 aaKnown RBP6.9□□□□□ -1.31
PTBP3-207ENST00000458258 IFIT1P09914 478 aaKnown RBP6.9□□□□□ -1.31
PTBP3-207ENST00000458258 RAD50Q92878 1312 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 APOBRQ0VD83 1088 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 GPT2Q8TD30 523 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 SDR42E1Q8WUS8 393 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 MRVI1Q9Y6F6 885 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 CCDC171Q6TFL3 1326 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 CHRNDQ07001 517 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 VPS72Q15906 364 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 CPVLQ9H3G5 476 aa6.9□□□□□ -1.31
PTBP3-207ENST00000458258 CLEC10AQ8IUN9 316 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 ARMT1Q9H993 441 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 CTSWP56202 376 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 CTDNEP1O95476 244 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 FGFR2P21802 821 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
PTBP3-207ENST00000458258 GLRX3O76003 335 aaKnown RBP6.89□□□□□ -1.31
PTBP3-207ENST00000458258 AAMPQ13685 434 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 DIXDC1Q155Q3 683 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 C5P01031 1676 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 HSPD1P10809 573 aaKnown RBP6.89□□□□□ -1.31
PTBP3-207ENST00000458258 ATP5JP18859 108 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 LCORLQ8N3X6 602 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 DIAPH3Q9NSV4 1193 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 CNNM1Q9NRU3 951 aa6.89□□□□□ -1.31
PTBP3-207ENST00000458258 NMT2O60551 498 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 STARD3NLO95772 234 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 BAG4O95429 457 aaKnown RBP6.88□□□□□ -1.31
PTBP3-207ENST00000458258 MCTP1Q6DN14 999 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 TOGARAM1Q9Y4F4 1720 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 RAB11FIP3O75154 756 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 FDPSP14324 419 aaKnown RBP6.88□□□□□ -1.31
PTBP3-207ENST00000458258 CHAF1AQ13111 956 aaPredicted RBP6.88□□□□□ -1.31
PTBP3-207ENST00000458258 WASHC4Q2M389 1173 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
PTBP3-207ENST00000458258 CYB5R4Q7L1T6 521 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 PAG1Q9NWQ8 432 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 TMEM63CQ9P1W3 806 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 CEP126Q9P2H0 1117 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 TXNRD1Q16881 649 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 CCDC57Q2TAC2 916 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 IFIT5Q13325 482 aaKnown RBP6.88□□□□□ -1.31
PTBP3-207ENST00000458258 HSCBQ8IWL3 235 aa6.88□□□□□ -1.31
PTBP3-207ENST00000458258 RPAP1Q9BWH6 1393 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms