RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ZBTB12Q9Y330 459 aaPredicted RBP27.79■■■□□ 2.04
CPNE1-220ENST00000458038 PDE8AO60658 829 aa27.78■■■□□ 2.04
CPNE1-220ENST00000458038 CWC25Q9NXE8 425 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-220ENST00000458038 POLR2AP24928 1970 aaKnown RBP27.78■■■□□ 2.04
CPNE1-220ENST00000458038 METTL22Q9BUU2 404 aaPredicted RBP27.77■■■□□ 2.04
CPNE1-220ENST00000458038 C8orf58Q8NAV2 365 aa27.76■■■□□ 2.03
CPNE1-220ENST00000458038 ZNF408Q9H9D4 720 aa27.76■■■□□ 2.03
CPNE1-220ENST00000458038 ANKIB1Q9P2G1 1089 aa27.76■■■□□ 2.03
CPNE1-220ENST00000458038 SHTN1A0MZ66 631 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 G3V3G9 751 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 DOK7Q18PE1 504 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 DCAF8Q5TAQ9 597 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 SAMD7Q7Z3H4 446 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 USP48Q86UV5 1035 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 GGA1Q9UJY5 639 aa27.75■■■□□ 2.03
CPNE1-220ENST00000458038 AOC2O75106 756 aa27.74■■■□□ 2.03
CPNE1-220ENST00000458038 VIL1P09327 827 aaKnown RBP27.74■■■□□ 2.03
CPNE1-220ENST00000458038 BRPF1P55201 1214 aaPredicted RBP27.74■■■□□ 2.03
CPNE1-220ENST00000458038 DCPSQ96C86 337 aaKnown RBP27.74■■■□□ 2.03
CPNE1-220ENST00000458038 SEC31BQ9NQW1 1179 aa27.74■■■□□ 2.03
CPNE1-220ENST00000458038 KRT26Q7Z3Y9 468 aa27.73■■■□□ 2.03
CPNE1-220ENST00000458038 RTL9Q8NET4 1388 aa27.73■■■□□ 2.03
CPNE1-220ENST00000458038 COL4A1P02462 1669 aa27.72■■■□□ 2.03
CPNE1-220ENST00000458038 UFL1O94874 794 aa27.72■■■□□ 2.03
CPNE1-220ENST00000458038 NOGQ13253 232 aa27.72■■■□□ 2.03
CPNE1-220ENST00000458038 TBC1D10BQ4KMP7 808 aaPredicted RBP27.72■■■□□ 2.03
CPNE1-220ENST00000458038 ANKRD18AQ8IVF6 992 aa27.71■■■□□ 2.03
CPNE1-220ENST00000458038 ABHD8Q96I13 439 aa27.71■■■□□ 2.03
CPNE1-220ENST00000458038 KCNQ5Q9NR82 932 aa27.71■■■□□ 2.03
CPNE1-220ENST00000458038 SCN9AQ15858 1988 aa27.7■■■□□ 2.03
CPNE1-220ENST00000458038 HUNKP57058 714 aa27.7■■■□□ 2.02
CPNE1-220ENST00000458038 KSR2Q6VAB6 950 aa27.7■■■□□ 2.02
CPNE1-220ENST00000458038 MAP3K2Q9Y2U5 619 aa27.7■■■□□ 2.02
CPNE1-220ENST00000458038 XDHP47989 1333 aa27.69■■■□□ 2.02
CPNE1-220ENST00000458038 ZNF609O15014 1411 aa27.69■■■□□ 2.02
CPNE1-220ENST00000458038 NEXNQ0ZGT2 675 aa27.69■■■□□ 2.02
CPNE1-220ENST00000458038 C2orf69Q8N8R5 385 aa27.69■■■□□ 2.02
CPNE1-220ENST00000458038 AGBL3Q8NEM8 1001 aa27.69■■■□□ 2.02
CPNE1-220ENST00000458038 CDC5LQ99459 802 aaKnown RBP27.69■■■□□ 2.02
CPNE1-220ENST00000458038 STK31Q9BXU1 1019 aa27.69■■■□□ 2.02
CPNE1-220ENST00000458038 CCDC27Q2M243 656 aa27.68■■■□□ 2.02
CPNE1-220ENST00000458038 KIF4BQ2VIQ3 1234 aa27.68■■■□□ 2.02
CPNE1-220ENST00000458038 RBM26Q5T8P6 1007 aaKnown RBP27.68■■■□□ 2.02
CPNE1-220ENST00000458038 EGFRP00533 1210 aa27.67■■■□□ 2.02
CPNE1-220ENST00000458038 ATP2B4P23634 1241 aa27.67■■■□□ 2.02
CPNE1-220ENST00000458038 GBA2Q9HCG7 927 aaPredicted RBP27.67■■■□□ 2.02
CPNE1-220ENST00000458038 MYH3P11055 1940 aa27.67■■■□□ 2.02
CPNE1-220ENST00000458038 PI4KAP2A4QPH2 592 aa27.66■■■□□ 2.02
CPNE1-220ENST00000458038 PODNQ7Z5L7 613 aa27.66■■■□□ 2.02
CPNE1-220ENST00000458038 SULF1Q8IWU6 871 aa27.66■■■□□ 2.02
CPNE1-220ENST00000458038 TSPYL6Q8N831 410 aa27.66■■■□□ 2.02
CPNE1-220ENST00000458038 PI4KAP1Q8N8J0 262 aa27.66■■■□□ 2.02
CPNE1-220ENST00000458038 PSME4Q14997 1843 aa27.66■■■□□ 2.02
CPNE1-220ENST00000458038 CTSWP56202 376 aa27.65■■■□□ 2.02
CPNE1-220ENST00000458038 ZNF280AP59817 542 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-220ENST00000458038 RSBN1LQ6PCB5 846 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-220ENST00000458038 CCDC102AQ96A19 550 aa27.65■■■□□ 2.02
CPNE1-220ENST00000458038 NCBP3Q53F19 620 aaKnown RBP27.64■■■□□ 2.02
CPNE1-220ENST00000458038 RGMBQ6NW40 437 aa27.64■■■□□ 2.02
CPNE1-220ENST00000458038 JARID2Q92833 1246 aaPredicted RBP27.64■■■□□ 2.02
CPNE1-220ENST00000458038 BSDC1Q9NW68 430 aaPredicted RBP27.64■■■□□ 2.02
CPNE1-220ENST00000458038 CASP8AP2Q9UKL3 1982 aa27.63■■■□□ 2.01
CPNE1-220ENST00000458038 IGKV5-2P06315 115 aa27.63■■■□□ 2.01
CPNE1-220ENST00000458038 TTLL11Q8NHH1 800 aa27.63■■■□□ 2.01
CPNE1-220ENST00000458038 CCDC85AQ96PX6 553 aaPredicted RBP27.63■■■□□ 2.01
CPNE1-220ENST00000458038 CACNA1FO60840 1977 aa27.62■■■□□ 2.01
CPNE1-220ENST00000458038 TSKSQ9UJT2 592 aa27.62■■■□□ 2.01
CPNE1-220ENST00000458038 USP17L3A6NCW0 530 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 USP17L4A6NCW7 530 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 ADM5C9JUS6 153 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 USP17L1Q7RTZ2 530 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 WWC1Q8IX03 1113 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 GMLQ99445 158 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 GGA3Q9NZ52 723 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 IL16Q14005 1332 aa27.61■■■□□ 2.01
CPNE1-220ENST00000458038 USP17L8P0C7I0 530 aa27.6■■■□□ 2.01
CPNE1-220ENST00000458038 TWISTNBQ3B726 338 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-220ENST00000458038 DLK2Q6UY11 383 aa27.6■■■□□ 2.01
CPNE1-220ENST00000458038 TSR2Q969E8 191 aaKnown RBP27.6■■■□□ 2.01
CPNE1-220ENST00000458038 MINPP1Q9UNW1 487 aa27.59■■■□□ 2.01
CPNE1-220ENST00000458038 PITPNM2Q9BZ72 1349 aa27.59■■■□□ 2.01
CPNE1-220ENST00000458038 MED23Q9ULK4 1368 aa27.59■■■□□ 2.01
CPNE1-220ENST00000458038 NEURL1BA8MQ27 555 aa27.58■■■□□ 2.01
CPNE1-220ENST00000458038 FAM155AB1AL88 458 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-220ENST00000458038 H7C1W4 665 aa27.58■■■□□ 2.01
CPNE1-220ENST00000458038 MMP14P50281 582 aa27.58■■■□□ 2.01
CPNE1-220ENST00000458038 ZNF157P51786 506 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-220ENST00000458038 SCARF1Q14162 830 aa27.58■■■□□ 2.01
CPNE1-220ENST00000458038 SLC4A2P04920 1241 aa27.57■■■□□ 2
CPNE1-220ENST00000458038 FKBP1BP68106 108 aa27.57■■■□□ 2
CPNE1-220ENST00000458038 GREM2Q9H772 168 aa27.57■■■□□ 2
CPNE1-220ENST00000458038 MYOZ2Q9NPC6 264 aa27.57■■■□□ 2
CPNE1-220ENST00000458038 SAGE1Q9NXZ1 904 aa27.57■■■□□ 2
CPNE1-220ENST00000458038 CWF19L2Q2TBE0 894 aaKnown RBP27.56■■■□□ 2
CPNE1-220ENST00000458038 REM2Q8IYK8 340 aaPredicted RBP27.56■■■□□ 2
CPNE1-220ENST00000458038 AKAP11Q9UKA4 1901 aa27.55■■■□□ 2
CPNE1-220ENST00000458038 CCT4P50991 539 aaKnown RBP27.55■■■□□ 2
CPNE1-220ENST00000458038 ANGEL2Q5VTE6 544 aaKnown RBP27.55■■■□□ 2
CPNE1-220ENST00000458038 CDCA5Q96FF9 252 aa27.55■■■□□ 2
CPNE1-220ENST00000458038 ZIC5Q96T25 663 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms