RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
UPF3AP2-201ENST00000457924 YDJCA8MPS7 323 aa18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 SLC34A2O95436 690 aa18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 CHRM1P11229 460 aaPredicted RBP18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 NOGQ13253 232 aa18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 MICALL2Q8IY33 904 aa18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 MCOLN1Q9GZU1 580 aa18.77■□□□□ 0.6
UPF3AP2-201ENST00000457924 SHTN1A0MZ66 631 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 PYGBP11216 843 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 DPF2Q92785 391 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 LRRC37AA6NMS7 1700 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
UPF3AP2-201ENST00000457924 HUNKP57058 714 aa18.75■□□□□ 0.59
UPF3AP2-201ENST00000457924 KIF12Q96FN5 646 aa18.75■□□□□ 0.59
UPF3AP2-201ENST00000457924 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
UPF3AP2-201ENST00000457924 NSFL1CQ9UNZ2 370 aaKnown RBP18.74■□□□□ 0.59
UPF3AP2-201ENST00000457924 DDX60Q8IY21 1712 aaKnown RBP18.74■□□□□ 0.59
UPF3AP2-201ENST00000457924 POLR2AP24928 1970 aaKnown RBP18.73■□□□□ 0.59
UPF3AP2-201ENST00000457924 PSMD14O00487 310 aa18.73■□□□□ 0.59
UPF3AP2-201ENST00000457924 DGKZQ13574 1117 aa18.73■□□□□ 0.59
UPF3AP2-201ENST00000457924 SAMD7Q7Z3H4 446 aa18.73■□□□□ 0.59
UPF3AP2-201ENST00000457924 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
UPF3AP2-201ENST00000457924 DBNDD1Q9H9R9 158 aa18.73■□□□□ 0.59
UPF3AP2-201ENST00000457924 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
UPF3AP2-201ENST00000457924 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
UPF3AP2-201ENST00000457924 TBC1D10BQ4KMP7 808 aaPredicted RBP18.72■□□□□ 0.59
UPF3AP2-201ENST00000457924 KRT26Q7Z3Y9 468 aa18.72■□□□□ 0.59
UPF3AP2-201ENST00000457924 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
UPF3AP2-201ENST00000457924 CHPF2Q9P2E5 772 aa18.72■□□□□ 0.59
UPF3AP2-201ENST00000457924 RPS12P25398 132 aaKnown RBP18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 RGMBQ6NW40 437 aa18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 C2orf69Q8N8R5 385 aa18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 CELF1Q92879 486 aaKnown RBP18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 DCPSQ96C86 337 aaKnown RBP18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 FAM89AQ96GI7 184 aa18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 ZIC5Q96T25 663 aa18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 EYA3Q99504 573 aa18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 GBA2Q9HCG7 927 aaPredicted RBP18.71■□□□□ 0.59
UPF3AP2-201ENST00000457924 CHL1O00533 1208 aa18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 ECE2O60344 883 aa18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 ECM2O94769 699 aaPredicted RBP18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 KRT24Q2M2I5 525 aa18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 RBM26Q5T8P6 1007 aaKnown RBP18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 DLK2Q6UY11 383 aa18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 POLLQ9UGP5 575 aa18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
UPF3AP2-201ENST00000457924 GPSM2P81274 684 aa18.69■□□□□ 0.58
UPF3AP2-201ENST00000457924 HDGFL1Q5TGJ6 251 aa18.69■□□□□ 0.58
UPF3AP2-201ENST00000457924 CCDC102AQ96A19 550 aa18.69■□□□□ 0.58
UPF3AP2-201ENST00000457924 ISCA1Q9BUE6 129 aa18.69■□□□□ 0.58
UPF3AP2-201ENST00000457924 FAM155AB1AL88 458 aaPredicted RBP18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 ADM5C9JUS6 153 aa18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 EGFRP00533 1210 aa18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 RALBP1Q15311 655 aa18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 DOK7Q18PE1 504 aa18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 SAGE1Q9NXZ1 904 aa18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 DBF4Q9UBU7 674 aaPredicted RBP18.68■□□□□ 0.58
UPF3AP2-201ENST00000457924 MAP3K13O43283 966 aa18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 HOXB7P09629 217 aa18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 ZNF157P51786 506 aaPredicted RBP18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 KIF4BQ2VIQ3 1234 aa18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 TBC1D16Q8TBP0 767 aa18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 KCNQ5Q9NR82 932 aa18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 RTL9Q8NET4 1388 aa18.67■□□□□ 0.58
UPF3AP2-201ENST00000457924 AKAP11Q9UKA4 1901 aa18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 G3V3G9 751 aa18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 RPS8P62241 208 aaKnown RBP18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 KIF23Q02241 960 aaPredicted RBP18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 SULF1Q8IWU6 871 aa18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 ZC3H12CQ9C0D7 883 aaKnown RBP18.66■□□□□ 0.58
UPF3AP2-201ENST00000457924 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
UPF3AP2-201ENST00000457924 COL4A1P02462 1669 aa18.64■□□□□ 0.57
UPF3AP2-201ENST00000457924 VIL1P09327 827 aaKnown RBP18.64■□□□□ 0.57
UPF3AP2-201ENST00000457924 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
UPF3AP2-201ENST00000457924 SCN9AQ15858 1988 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 TRPA1O75762 1119 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 RNF186Q9NXI6 227 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 GGA3Q9NZ52 723 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 ANKIB1Q9P2G1 1089 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 TRIM35Q9UPQ4 493 aa18.63■□□□□ 0.57
UPF3AP2-201ENST00000457924 SLC10A3P09131 477 aa18.62■□□□□ 0.57
UPF3AP2-201ENST00000457924 CLCN6P51797 869 aa18.62■□□□□ 0.57
UPF3AP2-201ENST00000457924 UFL1O94874 794 aa18.61■□□□□ 0.57
UPF3AP2-201ENST00000457924 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
UPF3AP2-201ENST00000457924 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
UPF3AP2-201ENST00000457924 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms