RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RFC4P35249 363 aa10.8□□□□□ -0.68
RIF1-208ENST00000457745 PARP10Q53GL7 1025 aa10.8□□□□□ -0.68
RIF1-208ENST00000457745 MSL1Q68DK7 614 aa10.8□□□□□ -0.68
RIF1-208ENST00000457745 CCDC8Q9H0W5 538 aaPredicted RBP10.8□□□□□ -0.68
RIF1-208ENST00000457745 ARAP2Q8WZ64 1704 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 EYA2O00167 538 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 ZPR1O75312 459 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 MAP4K4O95819 1239 aaPredicted RBP10.79□□□□□ -0.68
RIF1-208ENST00000457745 MX1P20591 662 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 ADORA1P30542 326 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 NPM2Q86SE8 214 aaKnown RBP10.79□□□□□ -0.68
RIF1-208ENST00000457745 KIF1BPQ96EK5 621 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 IL25Q9H293 177 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 STAP2Q9UGK3 403 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 DBNLQ9UJU6 430 aaKnown RBP10.79□□□□□ -0.68
RIF1-208ENST00000457745 ZNF652Q9Y2D9 606 aa10.79□□□□□ -0.68
RIF1-208ENST00000457745 RBM19Q9Y4C8 960 aaKnown RBP10.79□□□□□ -0.68
RIF1-208ENST00000457745 POLRMTO00411 1230 aaKnown RBP10.78□□□□□ -0.68
RIF1-208ENST00000457745 RGL2O15211 777 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 SDSP20132 328 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
RIF1-208ENST00000457745 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
RIF1-208ENST00000457745 TNNI3KQ59H18 835 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 SLC10A5Q5PT55 438 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 PRR5LQ6MZQ0 368 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 AACSQ86V21 672 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 VGLL2Q8N8G2 317 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 DBNDD2Q9BQY9 259 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 OSBPL3Q9H4L5 887 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 RIPOR2Q9Y4F9 1068 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 NDUFB9Q9Y6M9 179 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 FPGT-TNNI3KV9GXZ4 949 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 AK9Q5TCS8 1911 aa10.78□□□□□ -0.68
RIF1-208ENST00000457745 CHGBP05060 677 aa10.77□□□□□ -0.69
RIF1-208ENST00000457745 BMP2KLQ5H9B9 411 aa10.77□□□□□ -0.69
RIF1-208ENST00000457745 HELBQ8NG08 1087 aaPredicted RBP10.77□□□□□ -0.69
RIF1-208ENST00000457745 CELF1Q92879 486 aaKnown RBP10.77□□□□□ -0.69
RIF1-208ENST00000457745 EDC3Q96F86 508 aaKnown RBP10.77□□□□□ -0.69
RIF1-208ENST00000457745 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.69
RIF1-208ENST00000457745 RTL9Q8NET4 1388 aa10.77□□□□□ -0.69
RIF1-208ENST00000457745 TIMM10P62072 90 aa10.76□□□□□ -0.69
RIF1-208ENST00000457745 IFIT5Q13325 482 aaKnown RBP10.76□□□□□ -0.69
RIF1-208ENST00000457745 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
RIF1-208ENST00000457745 SLC15A2Q16348 729 aa10.76□□□□□ -0.69
RIF1-208ENST00000457745 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
RIF1-208ENST00000457745 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
RIF1-208ENST00000457745 SETDB2Q96T68 719 aa10.76□□□□□ -0.69
RIF1-208ENST00000457745 HDAC5Q9UQL6 1122 aa10.76□□□□□ -0.69
RIF1-208ENST00000457745 MYO5AQ9Y4I1 1855 aaKnown RBP10.76□□□□□ -0.69
RIF1-208ENST00000457745 AKAP11Q9UKA4 1901 aa10.76□□□□□ -0.69
RIF1-208ENST00000457745 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
RIF1-208ENST00000457745 CIAO1O76071 339 aa10.75□□□□□ -0.69
RIF1-208ENST00000457745 SERPINB2P05120 415 aa10.75□□□□□ -0.69
RIF1-208ENST00000457745 SCARF1Q14162 830 aa10.75□□□□□ -0.69
RIF1-208ENST00000457745 CCDC57Q2TAC2 916 aa10.75□□□□□ -0.69
RIF1-208ENST00000457745 TBC1D9Q6ZT07 1266 aa10.75□□□□□ -0.69
RIF1-208ENST00000457745 TAF5LO75529 589 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 KLRK1P26718 216 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 IL15P40933 162 aaPredicted RBP10.74□□□□□ -0.69
RIF1-208ENST00000457745 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 ERC1Q8IUD2 1116 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
RIF1-208ENST00000457745 CACNA1SQ13698 1873 aa10.74□□□□□ -0.69
RIF1-208ENST00000457745 LRRC37AA6NMS7 1700 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 LTBP1Q14766 1721 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 A0A1B0GUL7 405 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 FGFR2P21802 821 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 GSE1Q14687 1217 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 PI16Q6UXB8 463 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 PELP1Q8IZL8 1130 aaKnown RBP10.73□□□□□ -0.69
RIF1-208ENST00000457745 CLASRPQ8N2M8 674 aaKnown RBP10.73□□□□□ -0.69
RIF1-208ENST00000457745 CNBD1Q8NA66 436 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 OTUD5Q96G74 571 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 ECHDC1Q9NTX5 307 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 AOX1Q06278 1338 aa10.73□□□□□ -0.69
RIF1-208ENST00000457745 KIAA1551Q9HCM1 1747 aa10.72□□□□□ -0.69
RIF1-208ENST00000457745 GALR2O43603 387 aaPredicted RBP10.72□□□□□ -0.69
RIF1-208ENST00000457745 MMP10P09238 476 aa10.72□□□□□ -0.69
RIF1-208ENST00000457745 BAG6P46379 1132 aa10.72□□□□□ -0.69
RIF1-208ENST00000457745 LDHAL6AQ6ZMR3 332 aa10.72□□□□□ -0.69
RIF1-208ENST00000457745 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
RIF1-208ENST00000457745 STK32BQ9NY57 414 aa10.72□□□□□ -0.69
RIF1-208ENST00000457745 COL1A1P02452 1464 aaPredicted RBP10.72□□□□□ -0.69
RIF1-208ENST00000457745 IFIT2P09913 472 aaKnown RBP10.71□□□□□ -0.69
RIF1-208ENST00000457745 CCDC152Q4G0S7 254 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 TAF7LQ5H9L4 462 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 METTL24Q5JXM2 366 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 OLFM4Q6UX06 510 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 TPTE2Q6XPS3 522 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
RIF1-208ENST00000457745 XAGE2Q96GT9 111 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 GPR101Q96P66 508 aaPredicted RBP10.71□□□□□ -0.69
RIF1-208ENST00000457745 NYXQ9GZU5 481 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 ANTXR1Q9H6X2 564 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 GPR108Q9NPR9 543 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 IRS2Q9Y4H2 1338 aa10.71□□□□□ -0.69
RIF1-208ENST00000457745 DUOX1Q9NRD9 1551 aa10.7□□□□□ -0.7
RIF1-208ENST00000457745 TTC41PQ6P2S7 1318 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms