RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 TMC6Q7Z403 805 aa9.71□□□□□ -0.86
NEDD4L-209ENST00000456986 SUDS3Q9H7L9 328 aaPredicted RBP9.71□□□□□ -0.86
NEDD4L-209ENST00000456986 MKNK2Q9HBH9 465 aa9.71□□□□□ -0.86
NEDD4L-209ENST00000456986 ASXL2Q76L83 1435 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 IFIT3O14879 490 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 OPA1O60313 960 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 UBASH3AP57075 661 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 KRT83P78385 493 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 NSRP1Q9H0G5 558 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 TMOD2Q9NZR1 351 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 IMPACTQ9P2X3 320 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 SSX2IPQ9Y2D8 614 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 TNRQ92752 1358 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 BICDL2A1A5D9 508 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 F13A1P00488 732 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 MRPS27Q92552 414 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 KIF20BQ96Q89 1820 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 IGHDP01880 384 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 LDHCP07864 332 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 TRIM14Q14142 442 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 GOLGA8AA7E2F4 631 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 GOLGA1Q92805 767 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 FERMT1Q9BQL6 677 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 MAP3K2Q9Y2U5 619 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 MSH6P52701 1360 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 GRM8O00222 908 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 HSF2BPO75031 334 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 ATP8B2P98198 1209 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 MRPL50Q8N5N7 158 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 MAP3K5Q99683 1374 aa9.7□□□□□ -0.86
NEDD4L-209ENST00000456986 RASAL2Q9UJF2 1139 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 HECW2Q9P2P5 1572 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 MYOM2P54296 1465 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 TMEM67Q5HYA8 995 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 DZIP1Q86YF9 867 aaKnown RBP9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 IQCDQ96DY2 449 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 CCDC94Q9BW85 323 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 MAP3K4Q9Y6R4 1608 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 CLUL1Q15846 466 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 FAM114A2Q9NRY5 505 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 ZBTB40Q9NUA8 1239 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 RAPGEF3O95398 923 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 XPCQ01831 940 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 ERMNQ8TAM6 284 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 ZNF526Q8TF50 670 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 ZHX3Q9H4I2 956 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 UBA7P41226 1012 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 USP5P45974 858 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 ZNF445P59923 1031 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 ZNF444Q8N0Y2 327 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 SREK1Q8WXA9 508 aaKnown RBP9.69□□□□□ -0.86
NEDD4L-209ENST00000456986 IDI1Q13907 227 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 IFNL2Q8IZJ0 200 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 MKRN1Q9UHC7 482 aaKnown RBP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 KRT86O43790 486 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 XRCC6P12956 609 aaKnown RBP eCLIP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 MYD88Q99836 296 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 SMARCA5O60264 1052 aaPredicted RBP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 IL15P40933 162 aaPredicted RBP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 ANO6Q4KMQ2 910 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 TBC1D5Q92609 795 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 ZCCHC11Q5TAX3 1644 aaKnown RBP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 DISP1Q96F81 1524 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 FAM193AP78312 1265 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 ESR2Q92731 530 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 CCDC160A6NGH7 325 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 ZPR1O75312 459 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 MTIF2P46199 727 aaKnown RBP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 CNGA4Q8IV77 575 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 IPO4Q8TEX9 1081 aaKnown RBP9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 SMC6Q96SB8 1091 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 PCDHB15Q9Y5E8 787 aa9.68□□□□□ -0.86
NEDD4L-209ENST00000456986 TYRO3Q06418 890 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 ORC3Q9UBD5 711 aaPredicted RBP9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 NLRP5P59047 1200 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 CCDC174Q6PII3 467 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 CKAP2LQ8IYA6 745 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 USP16Q9Y5T5 823 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 YTHDC2Q9H6S0 1430 aaKnown RBP9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 PSMA7O14818 248 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 FERMT3Q86UX7 667 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 TTC14Q96N46 770 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 TSNARE1Q96NA8 513 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 ZBTB43O43298 467 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 PPP2R5BQ15173 497 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 CCDC155Q8N6L0 562 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 JAKMIP2Q96AA8 810 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 TESK2Q96S53 571 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 ATP2B2Q01814 1243 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 SKILP12757 684 aa9.67□□□□□ -0.86
NEDD4L-209ENST00000456986 KLHL10Q6JEL2 608 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms