RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 NOB1Q9ULX3 412 aaKnown RBP29.22■■■□□ 2.27
CBX3-204ENST00000456948 LRRC37AA6NMS7 1700 aa29.22■■■□□ 2.27
CBX3-204ENST00000456948 ZBED9Q6R2W3 1325 aa29.21■■■□□ 2.27
CBX3-204ENST00000456948 LMOD1P29536 600 aaPredicted RBP29.21■■■□□ 2.27
CBX3-204ENST00000456948 CCT4P50991 539 aaKnown RBP29.21■■■□□ 2.27
CBX3-204ENST00000456948 TNIP1Q15025 636 aa29.21■■■□□ 2.27
CBX3-204ENST00000456948 CCDC57Q2TAC2 916 aa29.21■■■□□ 2.27
CBX3-204ENST00000456948 TBC1D16Q8TBP0 767 aa29.21■■■□□ 2.27
CBX3-204ENST00000456948 POLLQ9UGP5 575 aa29.21■■■□□ 2.27
CBX3-204ENST00000456948 HACL1Q9UJ83 578 aa29.21■■■□□ 2.27
CBX3-204ENST00000456948 UFL1O94874 794 aa29.2■■■□□ 2.26
CBX3-204ENST00000456948 ATP2B4P23634 1241 aa29.2■■■□□ 2.26
CBX3-204ENST00000456948 FAM161AQ3B820 660 aa29.2■■■□□ 2.26
CBX3-204ENST00000456948 FOXO4P98177 505 aa29.19■■■□□ 2.26
CBX3-204ENST00000456948 TAF7LQ5H9L4 462 aa29.19■■■□□ 2.26
CBX3-204ENST00000456948 ARHGAP45Q92619 1136 aa29.19■■■□□ 2.26
CBX3-204ENST00000456948 ANKRD2Q9GZV1 360 aa29.19■■■□□ 2.26
CBX3-204ENST00000456948 HDAC5Q9UQL6 1122 aa29.19■■■□□ 2.26
CBX3-204ENST00000456948 RIMBP2O15034 1052 aa29.18■■■□□ 2.26
CBX3-204ENST00000456948 LMBR1LQ6UX01 489 aa29.18■■■□□ 2.26
CBX3-204ENST00000456948 CIAPIN1Q6FI81 312 aa29.17■■■□□ 2.26
CBX3-204ENST00000456948 MINPP1Q9UNW1 487 aa29.17■■■□□ 2.26
CBX3-204ENST00000456948 UTYO14607 1347 aa29.17■■■□□ 2.26
CBX3-204ENST00000456948 SCN4AP35499 1836 aa29.16■■■□□ 2.26
CBX3-204ENST00000456948 PNMA8AQ86V59 439 aaPredicted RBP29.16■■■□□ 2.26
CBX3-204ENST00000456948 NBPF7P0C2Y1 421 aaPredicted RBP29.15■■■□□ 2.26
CBX3-204ENST00000456948 CXCL9Q07325 125 aa29.15■■■□□ 2.26
CBX3-204ENST00000456948 TAF1DQ9H5J8 278 aaPredicted RBP29.15■■■□□ 2.26
CBX3-204ENST00000456948 LEMD3Q9Y2U8 911 aa29.14■■■□□ 2.26
CBX3-204ENST00000456948 EPHX2P34913 555 aa29.13■■■□□ 2.25
CBX3-204ENST00000456948 KCNJ4P48050 445 aa29.12■■■□□ 2.25
CBX3-204ENST00000456948 HTRA3P83110 453 aa29.12■■■□□ 2.25
CBX3-204ENST00000456948 SUCLG2Q96I99 432 aa29.12■■■□□ 2.25
CBX3-204ENST00000456948 COL4A5P29400 1685 aa29.12■■■□□ 2.25
CBX3-204ENST00000456948 DUOX1Q9NRD9 1551 aa29.11■■■□□ 2.25
CBX3-204ENST00000456948 RAD17O75943 681 aa29.11■■■□□ 2.25
CBX3-204ENST00000456948 EAPPQ56P03 285 aaPredicted RBP29.11■■■□□ 2.25
CBX3-204ENST00000456948 EPHA10Q5JZY3 1008 aa29.11■■■□□ 2.25
CBX3-204ENST00000456948 USP44Q9H0E7 712 aa29.11■■■□□ 2.25
CBX3-204ENST00000456948 DBNDD1Q9H9R9 158 aa29.11■■■□□ 2.25
CBX3-204ENST00000456948 COL4A1P02462 1669 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 ECE2O60344 883 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 DOK7Q18PE1 504 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 LDHAL6AQ6ZMR3 332 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 LDHDQ86WU2 507 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 CNNM1Q9NRU3 951 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 CLEC11AQ9Y240 323 aa29.1■■■□□ 2.25
CBX3-204ENST00000456948 CHADLQ6NUI6 762 aa29.09■■■□□ 2.25
CBX3-204ENST00000456948 FRAT1Q92837 279 aaPredicted RBP29.09■■■□□ 2.25
CBX3-204ENST00000456948 BICC1Q9H694 974 aaKnown RBP29.08■■■□□ 2.25
CBX3-204ENST00000456948 UBTFL1P0CB47 393 aaPredicted RBP29.07■■■□□ 2.24
CBX3-204ENST00000456948 POTEIP0CG38 1075 aa29.07■■■□□ 2.24
CBX3-204ENST00000456948 POTEJP0CG39 1038 aa29.07■■■□□ 2.24
CBX3-204ENST00000456948 CHRNDQ07001 517 aa29.07■■■□□ 2.24
CBX3-204ENST00000456948 PODNQ7Z5L7 613 aa29.07■■■□□ 2.24
CBX3-204ENST00000456948 GPR101Q96P66 508 aaPredicted RBP29.07■■■□□ 2.24
CBX3-204ENST00000456948 SPEF2Q9C093 1822 aa29.06■■■□□ 2.24
CBX3-204ENST00000456948 LTBP1Q14766 1721 aa29.06■■■□□ 2.24
CBX3-204ENST00000456948 ZNF804BA4D1E1 1349 aa29.06■■■□□ 2.24
CBX3-204ENST00000456948 YDJCA8MPS7 323 aa29.06■■■□□ 2.24
CBX3-204ENST00000456948 SCNN1DP51172 638 aa29.06■■■□□ 2.24
CBX3-204ENST00000456948 RABL6Q3YEC7 729 aaPredicted RBP29.06■■■□□ 2.24
CBX3-204ENST00000456948 USP50Q70EL3 339 aaPredicted RBP29.06■■■□□ 2.24
CBX3-204ENST00000456948 GPRC5DQ9NZD1 345 aa29.06■■■□□ 2.24
CBX3-204ENST00000456948 MED23Q9ULK4 1368 aa29.05■■■□□ 2.24
CBX3-204ENST00000456948 BCAR3O75815 825 aa29.05■■■□□ 2.24
CBX3-204ENST00000456948 RPS12P25398 132 aaKnown RBP29.05■■■□□ 2.24
CBX3-204ENST00000456948 GMPSP49915 693 aaPredicted RBP29.05■■■□□ 2.24
CBX3-204ENST00000456948 ATF7IPQ6VMQ6 1270 aa29.05■■■□□ 2.24
CBX3-204ENST00000456948 DNAJC5GQ8N7S2 189 aa29.05■■■□□ 2.24
CBX3-204ENST00000456948 H7C1D1 291 aa29.04■■■□□ 2.24
CBX3-204ENST00000456948 ZKSCAN2Q63HK3 967 aa29.04■■■□□ 2.24
CBX3-204ENST00000456948 KAZALD1Q96I82 304 aa29.04■■■□□ 2.24
CBX3-204ENST00000456948 ADARB2Q9NS39 739 aaKnown RBP29.04■■■□□ 2.24
CBX3-204ENST00000456948 INTS3Q68E01 1043 aaKnown RBP29.03■■■□□ 2.24
CBX3-204ENST00000456948 DPF2Q92785 391 aa29.03■■■□□ 2.24
CBX3-204ENST00000456948 PSMD14O00487 310 aa29.02■■■□□ 2.24
CBX3-204ENST00000456948 GNAI3P08754 354 aa29.02■■■□□ 2.24
CBX3-204ENST00000456948 EPS15P42566 896 aa29.02■■■□□ 2.24
CBX3-204ENST00000456948 ZNF594Q96JF6 807 aaPredicted RBP29.02■■■□□ 2.24
CBX3-204ENST00000456948 COA1Q9GZY4 146 aa29.02■■■□□ 2.24
CBX3-204ENST00000456948 CNOT7Q9UIV1 285 aaKnown RBP29.01■■■□□ 2.23
CBX3-204ENST00000456948 TRIM27P14373 513 aa29■■■□□ 2.23
CBX3-204ENST00000456948 VIL1P09327 827 aaKnown RBP28.99■■■□□ 2.23
CBX3-204ENST00000456948 ANKRD44Q8N8A2 993 aa28.99■■■□□ 2.23
CBX3-204ENST00000456948 MROH5Q6ZUA9 1318 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 USP17L3A6NCW0 530 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 USP17L4A6NCW7 530 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 PLIN1O60240 522 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 TAF5LO75529 589 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 USP17L1Q7RTZ2 530 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 HELBQ8NG08 1087 aaPredicted RBP28.98■■■□□ 2.23
CBX3-204ENST00000456948 KLRG1Q96E93 195 aa28.98■■■□□ 2.23
CBX3-204ENST00000456948 FTSJ3Q8IY81 847 aaKnown RBP28.97■■■□□ 2.23
CBX3-204ENST00000456948 MICALL2Q8IY33 904 aa28.96■■■□□ 2.23
CBX3-204ENST00000456948 AGBL3Q8NEM8 1001 aa28.96■■■□□ 2.23
CBX3-204ENST00000456948 KCNQ5Q9NR82 932 aa28.96■■■□□ 2.23
CBX3-204ENST00000456948 ZBTB12Q9Y330 459 aaPredicted RBP28.96■■■□□ 2.23
CBX3-204ENST00000456948 UBE4AQ14139 1066 aa28.95■■■□□ 2.22
CBX3-204ENST00000456948 RSBN1LQ6PCB5 846 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms