RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 PROSER3Q2NL68 480 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 FAM177A1Q8N128 213 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 PAG1Q9NWQ8 432 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 GIMAP7Q8NHV1 300 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 POLR3GO15318 223 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 BRMS1Q9HCU9 246 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
CSPG4P10-201ENST00000456932 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 SLC5A1P13866 664 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 ATP2B1P20020 1258 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 UBXN4Q92575 508 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 RRAGDQ9NQL2 400 aaPredicted RBP13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 RAI14Q9P0K7 980 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 HAND2P61296 217 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 GUCY1B3Q02153 619 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 MAP3K12Q12852 859 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 TMCO3Q6UWJ1 677 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 LRRC2Q9BYS8 371 aa13.13□□□□□ -0.31
CSPG4P10-201ENST00000456932 CRB1P82279 1406 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 TNNT1P13805 278 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ERBB3P21860 1342 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 NAPBQ9H115 298 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ADGRL3Q9HAR2 1447 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ITSN1Q15811 1721 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ADGRB2O60241 1585 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 SLC3A2P08195 630 aaKnown RBP13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 DBNDD2Q9BQY9 259 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 ABCF2Q9UG63 623 aa13.12□□□□□ -0.31
CSPG4P10-201ENST00000456932 Q6ZUG5 572 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 A1BGP04217 495 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 SYT1P21579 422 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 MAP2P11137 1827 aaKnown RBP13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 PTPRUQ92729 1446 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 DNM1Q05193 864 aaKnown RBP13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 IKQ13123 557 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 DDX19AQ9NUU7 478 aaKnown RBP13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
CSPG4P10-201ENST00000456932 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 SLC27A2O14975 620 aa13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 EYA2O00167 538 aa13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 CKAP2LQ8IYA6 745 aa13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 EAF2Q96CJ1 260 aaPredicted RBP13.1□□□□□ -0.31
CSPG4P10-201ENST00000456932 DIP2AQ14689 1571 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 ERLIN1O75477 346 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 NCOA7Q8NI08 942 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 MYO6Q9UM54 1294 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 MYO5BQ9ULV0 1848 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 TIMM10P62072 90 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 UQCRFS1P1P0C7P4 283 aa13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 GTPBP4Q9BZE4 634 aaKnown RBP13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 ZSCAN16Q9H4T2 348 aaPredicted RBP13.09□□□□□ -0.31
CSPG4P10-201ENST00000456932 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 HCLS1P14317 486 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 WASF1Q92558 559 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 C16orf45Q96MC5 204 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 TMOD2Q9NZR1 351 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 NRKQ7Z2Y5 1582 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 MCM5P33992 734 aa13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 NAP1L1P55209 391 aaKnown RBP13.08□□□□□ -0.32
CSPG4P10-201ENST00000456932 POLA2Q14181 598 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms