RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HACL1Q9UJ83 578 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 WDR90Q96KV7 1748 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 XDHP47989 1333 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 LRRC37AA6NMS7 1700 aa22.78■■□□□ 1.24
PDLIM2-215ENST00000456545 ATP2B4P23634 1241 aa22.78■■□□□ 1.24
PDLIM2-215ENST00000456545 SMC1BQ8NDV3 1235 aa22.78■■□□□ 1.24
PDLIM2-215ENST00000456545 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
PDLIM2-215ENST00000456545 IPO8O15397 1037 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 NBPF7P0C2Y1 421 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 CCT4P50991 539 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 BRPF1P55201 1214 aaPredicted RBP22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 FSTL1Q12841 308 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 TNIP1Q15025 636 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 CIAPIN1Q6FI81 312 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 COL4A1P02462 1669 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 KIF16BQ96L93 1317 aa22.77■■□□□ 1.24
PDLIM2-215ENST00000456545 RAD17O75943 681 aa22.76■■□□□ 1.23
PDLIM2-215ENST00000456545 CXCL9Q07325 125 aa22.76■■□□□ 1.23
PDLIM2-215ENST00000456545 DOK7Q18PE1 504 aa22.76■■□□□ 1.23
PDLIM2-215ENST00000456545 GPR101Q96P66 508 aaPredicted RBP22.76■■□□□ 1.23
PDLIM2-215ENST00000456545 DBNDD1Q9H9R9 158 aa22.76■■□□□ 1.23
PDLIM2-215ENST00000456545 COL4A5P29400 1685 aa22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 EAPPQ56P03 285 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 EPHA10Q5JZY3 1008 aa22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 SUCLG2Q96I99 432 aa22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 ANKRD2Q9GZV1 360 aa22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 CLEC11AQ9Y240 323 aa22.75■■□□□ 1.23
PDLIM2-215ENST00000456545 SPEF2Q9C093 1822 aa22.74■■□□□ 1.23
PDLIM2-215ENST00000456545 HSPA6P17066 643 aa22.74■■□□□ 1.23
PDLIM2-215ENST00000456545 EPHX2P34913 555 aa22.74■■□□□ 1.23
PDLIM2-215ENST00000456545 TAF1DQ9H5J8 278 aaPredicted RBP22.74■■□□□ 1.23
PDLIM2-215ENST00000456545 ECE2O60344 883 aa22.73■■□□□ 1.23
PDLIM2-215ENST00000456545 KCNJ4P48050 445 aa22.73■■□□□ 1.23
PDLIM2-215ENST00000456545 ARHGAP45Q92619 1136 aa22.73■■□□□ 1.23
PDLIM2-215ENST00000456545 UTYO14607 1347 aa22.73■■□□□ 1.23
PDLIM2-215ENST00000456545 SCN4AP35499 1836 aa22.73■■□□□ 1.23
PDLIM2-215ENST00000456545 PNMA8AQ86V59 439 aaPredicted RBP22.72■■□□□ 1.23
PDLIM2-215ENST00000456545 USP44Q9H0E7 712 aa22.72■■□□□ 1.23
PDLIM2-215ENST00000456545 CNNM1Q9NRU3 951 aa22.72■■□□□ 1.23
PDLIM2-215ENST00000456545 LEMD3Q9Y2U8 911 aa22.72■■□□□ 1.23
PDLIM2-215ENST00000456545 DUOX1Q9NRD9 1551 aa22.72■■□□□ 1.23
PDLIM2-215ENST00000456545 BCAR3O75815 825 aa22.71■■□□□ 1.23
PDLIM2-215ENST00000456545 LDHAL6AQ6ZMR3 332 aa22.71■■□□□ 1.23
PDLIM2-215ENST00000456545 BICC1Q9H694 974 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-215ENST00000456545 HDAC5Q9UQL6 1122 aa22.71■■□□□ 1.23
PDLIM2-215ENST00000456545 YDJCA8MPS7 323 aa22.7■■□□□ 1.22
PDLIM2-215ENST00000456545 CHRNDQ07001 517 aa22.7■■□□□ 1.22
PDLIM2-215ENST00000456545 CHADLQ6NUI6 762 aa22.7■■□□□ 1.22
PDLIM2-215ENST00000456545 ZNF594Q96JF6 807 aaPredicted RBP22.7■■□□□ 1.22
PDLIM2-215ENST00000456545 PLIN1O60240 522 aa22.69■■□□□ 1.22
PDLIM2-215ENST00000456545 UBTFL1P0CB47 393 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-215ENST00000456545 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-215ENST00000456545 LDHDQ86WU2 507 aa22.69■■□□□ 1.22
PDLIM2-215ENST00000456545 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
PDLIM2-215ENST00000456545 EPS15P42566 896 aa22.68■■□□□ 1.22
PDLIM2-215ENST00000456545 APLP1P51693 650 aa22.68■■□□□ 1.22
PDLIM2-215ENST00000456545 HELBQ8NG08 1087 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-215ENST00000456545 KAZALD1Q96I82 304 aa22.68■■□□□ 1.22
PDLIM2-215ENST00000456545 PSMD14O00487 310 aa22.67■■□□□ 1.22
PDLIM2-215ENST00000456545 POTEIP0CG38 1075 aa22.67■■□□□ 1.22
PDLIM2-215ENST00000456545 POTEJP0CG39 1038 aa22.67■■□□□ 1.22
PDLIM2-215ENST00000456545 SCNN1DP51172 638 aa22.67■■□□□ 1.22
PDLIM2-215ENST00000456545 GPRC5DQ9NZD1 345 aa22.67■■□□□ 1.22
PDLIM2-215ENST00000456545 H7C1D1 291 aa22.66■■□□□ 1.22
PDLIM2-215ENST00000456545 TAF5LO75529 589 aa22.66■■□□□ 1.22
PDLIM2-215ENST00000456545 ZKSCAN2Q63HK3 967 aa22.66■■□□□ 1.22
PDLIM2-215ENST00000456545 ATF7IPQ6VMQ6 1270 aa22.66■■□□□ 1.22
PDLIM2-215ENST00000456545 KCNQ5Q9NR82 932 aa22.66■■□□□ 1.22
PDLIM2-215ENST00000456545 LTBP1Q14766 1721 aa22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 WTIPA6NIX2 430 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 RABL6Q3YEC7 729 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 USP50Q70EL3 339 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 PODNQ7Z5L7 613 aa22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 CLUAP1Q96AJ1 413 aa22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 ADARB2Q9NS39 739 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 CNOT7Q9UIV1 285 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 ZBTB12Q9Y330 459 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-215ENST00000456545 MED23Q9ULK4 1368 aa22.64■■□□□ 1.22
PDLIM2-215ENST00000456545 INTS3Q68E01 1043 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-215ENST00000456545 ANKRD44Q8N8A2 993 aa22.64■■□□□ 1.21
PDLIM2-215ENST00000456545 FBXW7Q969H0 707 aa22.64■■□□□ 1.21
PDLIM2-215ENST00000456545 TRIM27P14373 513 aa22.63■■□□□ 1.21
PDLIM2-215ENST00000456545 COA1Q9GZY4 146 aa22.63■■□□□ 1.21
PDLIM2-215ENST00000456545 GNAI3P08754 354 aa22.62■■□□□ 1.21
PDLIM2-215ENST00000456545 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-215ENST00000456545 DPF2Q92785 391 aa22.62■■□□□ 1.21
PDLIM2-215ENST00000456545 USP17L3A6NCW0 530 aa22.61■■□□□ 1.21
PDLIM2-215ENST00000456545 USP17L4A6NCW7 530 aa22.61■■□□□ 1.21
PDLIM2-215ENST00000456545 VIL1P09327 827 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-215ENST00000456545 USP17L1Q7RTZ2 530 aa22.61■■□□□ 1.21
PDLIM2-215ENST00000456545 MICALL2Q8IY33 904 aa22.61■■□□□ 1.21
PDLIM2-215ENST00000456545 PUS3Q9BZE2 481 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-215ENST00000456545 MAP1SQ66K74 1059 aaPredicted RBP22.6■■□□□ 1.21
PDLIM2-215ENST00000456545 TXNRD3Q86VQ6 643 aa22.6■■□□□ 1.21
PDLIM2-215ENST00000456545 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-215ENST00000456545 CNTROBQ8N137 903 aa22.6■■□□□ 1.21
PDLIM2-215ENST00000456545 LRRFIP2Q9Y608 721 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms