RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 FZD9O00144 591 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 KIF3CO14782 793 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
TOP3B-212ENST00000456075 KCNJ4P48050 445 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 C1QTNF8P60827 252 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 GPC2Q8N158 579 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 SUCLG2Q96I99 432 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 ZNRF3Q9ULT6 936 aa13□□□□□ -0.33
TOP3B-212ENST00000456075 UTYO14607 1347 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 TOMM70O94826 608 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 LMOD1P29536 600 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-212ENST00000456075 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 ZKSCAN2Q63HK3 967 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
TOP3B-212ENST00000456075 USP44Q9H0E7 712 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
TOP3B-212ENST00000456075 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 MINPP1Q9UNW1 487 aa12.99□□□□□ -0.33
TOP3B-212ENST00000456075 TRIM27P14373 513 aa12.98□□□□□ -0.33
TOP3B-212ENST00000456075 TNIP1Q15025 636 aa12.98□□□□□ -0.33
TOP3B-212ENST00000456075 LDHAL6AQ6ZMR3 332 aa12.98□□□□□ -0.33
TOP3B-212ENST00000456075 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
TOP3B-212ENST00000456075 COL4A1P02462 1669 aa12.98□□□□□ -0.33
TOP3B-212ENST00000456075 GNAI3P08754 354 aa12.97□□□□□ -0.33
TOP3B-212ENST00000456075 CIAPIN1Q6FI81 312 aa12.97□□□□□ -0.33
TOP3B-212ENST00000456075 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-212ENST00000456075 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-212ENST00000456075 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
TOP3B-212ENST00000456075 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
TOP3B-212ENST00000456075 DUOX1Q9NRD9 1551 aa12.97□□□□□ -0.33
TOP3B-212ENST00000456075 ECE2O60344 883 aa12.96□□□□□ -0.33
TOP3B-212ENST00000456075 RAD17O75943 681 aa12.96□□□□□ -0.33
TOP3B-212ENST00000456075 CHRNDQ07001 517 aa12.96□□□□□ -0.33
TOP3B-212ENST00000456075 CXCL9Q07325 125 aa12.96□□□□□ -0.33
TOP3B-212ENST00000456075 DOK7Q18PE1 504 aa12.96□□□□□ -0.33
TOP3B-212ENST00000456075 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
TOP3B-212ENST00000456075 RBM46Q8TBY0 533 aaKnown RBP12.96□□□□□ -0.33
TOP3B-212ENST00000456075 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.33
TOP3B-212ENST00000456075 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
TOP3B-212ENST00000456075 LEMD3Q9Y2U8 911 aa12.96□□□□□ -0.33
TOP3B-212ENST00000456075 COL4A5P29400 1685 aa12.96□□□□□ -0.34
TOP3B-212ENST00000456075 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
TOP3B-212ENST00000456075 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
TOP3B-212ENST00000456075 PLIN1O60240 522 aa12.95□□□□□ -0.34
TOP3B-212ENST00000456075 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-212ENST00000456075 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-212ENST00000456075 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
TOP3B-212ENST00000456075 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
TOP3B-212ENST00000456075 WDR90Q96KV7 1748 aa12.95□□□□□ -0.34
TOP3B-212ENST00000456075 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
TOP3B-212ENST00000456075 MS4A1P11836 297 aa12.94□□□□□ -0.34
TOP3B-212ENST00000456075 EPHX2P34913 555 aa12.94□□□□□ -0.34
TOP3B-212ENST00000456075 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-212ENST00000456075 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
TOP3B-212ENST00000456075 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
TOP3B-212ENST00000456075 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-212ENST00000456075 MEIS3Q99687 375 aa12.94□□□□□ -0.34
TOP3B-212ENST00000456075 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-212ENST00000456075 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
TOP3B-212ENST00000456075 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
TOP3B-212ENST00000456075 TAF5LO75529 589 aa12.93□□□□□ -0.34
TOP3B-212ENST00000456075 GMPSP49915 693 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-212ENST00000456075 FSTL1Q12841 308 aa12.93□□□□□ -0.34
TOP3B-212ENST00000456075 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
TOP3B-212ENST00000456075 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
TOP3B-212ENST00000456075 RCAN3Q9UKA8 241 aa12.93□□□□□ -0.34
TOP3B-212ENST00000456075 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
TOP3B-212ENST00000456075 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 POTECB2RU33 542 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 PSMD14O00487 310 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 METTL24Q5JXM2 366 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 PODNQ7Z5L7 613 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
TOP3B-212ENST00000456075 SCN4AP35499 1836 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 GNAI2P04899 355 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 SCNN1DP51172 638 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 ZNF804AQ7Z570 1209 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 LDHDQ86WU2 507 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-212ENST00000456075 COA1Q9GZY4 146 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 GPRC5DQ9NZD1 345 aa12.91□□□□□ -0.34
TOP3B-212ENST00000456075 USP17L3A6NCW0 530 aa12.9□□□□□ -0.34
TOP3B-212ENST00000456075 USP17L4A6NCW7 530 aa12.9□□□□□ -0.34
TOP3B-212ENST00000456075 H7C1D1 291 aa12.9□□□□□ -0.34
TOP3B-212ENST00000456075 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
TOP3B-212ENST00000456075 EPS15P42566 896 aa12.9□□□□□ -0.34
TOP3B-212ENST00000456075 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.34
TOP3B-212ENST00000456075 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
TOP3B-212ENST00000456075 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
TOP3B-212ENST00000456075 ADARB2Q9NS39 739 aaKnown RBP12.9□□□□□ -0.34
TOP3B-212ENST00000456075 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms