RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 UFL1O94874 794 aa22.54■■□□□ 1.2
COL13A1-206ENST00000456019 MAP1SQ66K74 1059 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-206ENST00000456019 CNTROBQ8N137 903 aa22.54■■□□□ 1.2
COL13A1-206ENST00000456019 BCL2L13Q9BXK5 485 aa22.54■■□□□ 1.2
COL13A1-206ENST00000456019 ZC3H12CQ9C0D7 883 aaKnown RBP22.54■■□□□ 1.2
COL13A1-206ENST00000456019 DBNDD1Q9H9R9 158 aa22.54■■□□□ 1.2
COL13A1-206ENST00000456019 ADARB2Q9NS39 739 aaKnown RBP22.54■■□□□ 1.2
COL13A1-206ENST00000456019 MYH3P11055 1940 aa22.53■■□□□ 1.2
COL13A1-206ENST00000456019 F6X3S4 739 aa22.53■■□□□ 1.2
COL13A1-206ENST00000456019 CASP7P55210 303 aa22.53■■□□□ 1.2
COL13A1-206ENST00000456019 JMYQ8N9B5 988 aa22.53■■□□□ 1.2
COL13A1-206ENST00000456019 XDHP47989 1333 aa22.53■■□□□ 1.2
COL13A1-206ENST00000456019 ECE2O60344 883 aa22.52■■□□□ 1.2
COL13A1-206ENST00000456019 BEND3Q5T5X7 828 aa22.52■■□□□ 1.2
COL13A1-206ENST00000456019 GPR101Q96P66 508 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-206ENST00000456019 BSDC1Q9NW68 430 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-206ENST00000456019 DOK7Q18PE1 504 aa22.51■■□□□ 1.19
COL13A1-206ENST00000456019 G3V3G9 751 aa22.5■■□□□ 1.19
COL13A1-206ENST00000456019 ATP2B4P23634 1241 aa22.5■■□□□ 1.19
COL13A1-206ENST00000456019 DCAF8Q5TAQ9 597 aa22.5■■□□□ 1.19
COL13A1-206ENST00000456019 TMEM88BA6NKF7 163 aa22.49■■□□□ 1.19
COL13A1-206ENST00000456019 PSMD14O00487 310 aa22.49■■□□□ 1.19
COL13A1-206ENST00000456019 CSF1RP07333 972 aa22.49■■□□□ 1.19
COL13A1-206ENST00000456019 IGHMBP2P38935 993 aaKnown RBP22.49■■□□□ 1.19
COL13A1-206ENST00000456019 SLFN5Q08AF3 891 aa22.49■■□□□ 1.19
COL13A1-206ENST00000456019 ITGA6P23229 1130 aa22.48■■□□□ 1.19
COL13A1-206ENST00000456019 FAM161AQ3B820 660 aa22.48■■□□□ 1.19
COL13A1-206ENST00000456019 DPF2Q92785 391 aa22.48■■□□□ 1.19
COL13A1-206ENST00000456019 CNOT7Q9UIV1 285 aaKnown RBP22.48■■□□□ 1.19
COL13A1-206ENST00000456019 MINPP1Q9UNW1 487 aa22.48■■□□□ 1.19
COL13A1-206ENST00000456019 H7C1D1 291 aa22.47■■□□□ 1.19
COL13A1-206ENST00000456019 ZBTB12Q9Y330 459 aaPredicted RBP22.47■■□□□ 1.19
COL13A1-206ENST00000456019 ALDH1L1O75891 902 aa22.46■■□□□ 1.19
COL13A1-206ENST00000456019 RPS12P25398 132 aaKnown RBP22.46■■□□□ 1.19
COL13A1-206ENST00000456019 SLC4A10Q6U841 1118 aa22.46■■□□□ 1.19
COL13A1-206ENST00000456019 MICALL2Q8IY33 904 aa22.46■■□□□ 1.19
COL13A1-206ENST00000456019 MPHOSPH8Q99549 860 aa22.46■■□□□ 1.19
COL13A1-206ENST00000456019 KCNQ5Q9NR82 932 aa22.46■■□□□ 1.19
COL13A1-206ENST00000456019 GRM8O00222 908 aa22.45■■□□□ 1.18
COL13A1-206ENST00000456019 MRPL50Q8N5N7 158 aaKnown RBP22.45■■□□□ 1.18
COL13A1-206ENST00000456019 SRCIN1Q9C0H9 1055 aa22.45■■□□□ 1.18
COL13A1-206ENST00000456019 MKRN1Q9UHC7 482 aaKnown RBP22.45■■□□□ 1.18
COL13A1-206ENST00000456019 SPEF2Q9C093 1822 aa22.45■■□□□ 1.18
COL13A1-206ENST00000456019 ANKRD18BA2A2Z9 1011 aa22.44■■□□□ 1.18
COL13A1-206ENST00000456019 CCT4P50991 539 aaKnown RBP22.44■■□□□ 1.18
COL13A1-206ENST00000456019 FOXO4P98177 505 aa22.44■■□□□ 1.18
COL13A1-206ENST00000456019 ZC3H15Q8WU90 426 aaKnown RBP22.44■■□□□ 1.18
COL13A1-206ENST00000456019 C9orf78Q9NZ63 289 aaPredicted RBP22.44■■□□□ 1.18
COL13A1-206ENST00000456019 CNTNAP1P78357 1384 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 MED23Q9ULK4 1368 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 VIL1P09327 827 aaKnown RBP22.43■■□□□ 1.18
COL13A1-206ENST00000456019 TRPM4Q8TD43 1214 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 CDCA7LQ96GN5 454 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 ANKRD2Q9GZV1 360 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 PGAP2Q9UHJ9 254 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 LEMD3Q9Y2U8 911 aa22.43■■□□□ 1.18
COL13A1-206ENST00000456019 PTPRCP08575 1304 aa22.42■■□□□ 1.18
COL13A1-206ENST00000456019 SHTN1A0MZ66 631 aa22.42■■□□□ 1.18
COL13A1-206ENST00000456019 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-206ENST00000456019 IFIT5Q13325 482 aaKnown RBP22.42■■□□□ 1.18
COL13A1-206ENST00000456019 PODNQ7Z5L7 613 aa22.42■■□□□ 1.18
COL13A1-206ENST00000456019 CHMP3Q9Y3E7 222 aa22.42■■□□□ 1.18
COL13A1-206ENST00000456019 TRMT2AQ8IZ69 625 aaKnown RBP22.41■■□□□ 1.18
COL13A1-206ENST00000456019 SSH1Q8WYL5 1049 aa22.41■■□□□ 1.18
COL13A1-206ENST00000456019 WTIPA6NIX2 430 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-206ENST00000456019 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
COL13A1-206ENST00000456019 TRAF5O00463 557 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 EPHA10Q5JZY3 1008 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 SAMD7Q7Z3H4 446 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 AGBL3Q8NEM8 1001 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 SCN9AQ15858 1988 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 ZNF609O15014 1411 aa22.39■■□□□ 1.17
COL13A1-206ENST00000456019 ZNF804BA4D1E1 1349 aa22.38■■□□□ 1.17
COL13A1-206ENST00000456019 FMR1Q06787 632 aaKnown RBP eCLIP22.38■■□□□ 1.17
COL13A1-206ENST00000456019 CHRNDQ07001 517 aa22.38■■□□□ 1.17
COL13A1-206ENST00000456019 CCDC57Q2TAC2 916 aa22.38■■□□□ 1.17
COL13A1-206ENST00000456019 TBC1D10BQ4KMP7 808 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-206ENST00000456019 RSBN1LQ6PCB5 846 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-206ENST00000456019 ABT1Q9ULW3 272 aaKnown RBP22.38■■□□□ 1.17
COL13A1-206ENST00000456019 USP17L3A6NCW0 530 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 USP17L4A6NCW7 530 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 RASSF10A6NK89 507 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 CT47B1P0C2W7 299 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-206ENST00000456019 KCNJ4P48050 445 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 CDC37L1Q7L3B6 337 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 USP17L1Q7RTZ2 530 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 GLIS2Q9BZE0 524 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-206ENST00000456019 COA1Q9GZY4 146 aa22.37■■□□□ 1.17
COL13A1-206ENST00000456019 UTYO14607 1347 aa22.36■■□□□ 1.17
COL13A1-206ENST00000456019 VEGFBP49765 207 aa22.36■■□□□ 1.17
COL13A1-206ENST00000456019 DEFB115Q30KQ5 88 aa22.36■■□□□ 1.17
COL13A1-206ENST00000456019 TAF7LQ5H9L4 462 aa22.36■■□□□ 1.17
COL13A1-206ENST00000456019 CST9Q5W186 159 aa22.36■■□□□ 1.17
COL13A1-206ENST00000456019 EGFRP00533 1210 aa22.35■■□□□ 1.17
COL13A1-206ENST00000456019 NBPF7P0C2Y1 421 aaPredicted RBP22.35■■□□□ 1.17
COL13A1-206ENST00000456019 KIF4BQ2VIQ3 1234 aa22.35■■□□□ 1.17
COL13A1-206ENST00000456019 RBM26Q5T8P6 1007 aaKnown RBP22.35■■□□□ 1.17
COL13A1-206ENST00000456019 SUCLG2Q96I99 432 aa22.35■■□□□ 1.17
COL13A1-206ENST00000456019 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms